RNA–Protein interactions for RNA: ENST00000239374.7

CCDC170-201, Transcript of coiled-coil domain containing 170, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC170, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-201ENST00000239374 FOXA2Q9Y261 457 aaPredicted RBP9.07□□□□□ -0.96
CCDC170-201ENST00000239374 TRGV8A0A0C4DH27 118 aa9.07□□□□□ -0.96
CCDC170-201ENST00000239374 KIR2DL5BA0A0G2JN68 375 aa9.07□□□□□ -0.96
CCDC170-201ENST00000239374 KIR2DL5BA0A0G2JPC4 375 aa9.07□□□□□ -0.96
CCDC170-201ENST00000239374 H3BUT2 72 aa9.07□□□□□ -0.96
CCDC170-201ENST00000239374 KLK10O43240 276 aa9.07□□□□□ -0.96
CCDC170-201ENST00000239374 ASCL5Q7RTU5 278 aa9.07□□□□□ -0.96
CCDC170-201ENST00000239374 WDR86Q86TI4 376 aa9.07□□□□□ -0.96
CCDC170-201ENST00000239374 KIR2DL5AQ8N109 375 aa9.07□□□□□ -0.96
CCDC170-201ENST00000239374 MYOZ3Q8TDC0 251 aa9.07□□□□□ -0.96
CCDC170-201ENST00000239374 OR2T8A6NH00 312 aa9.07□□□□□ -0.96
CCDC170-201ENST00000239374 SRRM5B3KS81 715 aa9.07□□□□□ -0.96
CCDC170-201ENST00000239374 NPPCP23582 126 aa9.07□□□□□ -0.96
CCDC170-201ENST00000239374 TEX43Q6ZNM6 134 aa9.07□□□□□ -0.96
CCDC170-201ENST00000239374 WFDC3Q8IUB2 231 aa9.07□□□□□ -0.96
CCDC170-201ENST00000239374 TMEM105Q8N8V8 129 aa9.07□□□□□ -0.96
CCDC170-201ENST00000239374 LOXL4Q96JB6 756 aa9.07□□□□□ -0.96
CCDC170-201ENST00000239374 C11orf1Q9H5F2 150 aa9.07□□□□□ -0.96
CCDC170-201ENST00000239374 FNDC4Q9H6D8 234 aaPredicted RBP9.07□□□□□ -0.96
CCDC170-201ENST00000239374 J3KRW8 73 aa9.06□□□□□ -0.96
CCDC170-201ENST00000239374 FAM90A1Q86YD7 464 aa9.06□□□□□ -0.96
CCDC170-201ENST00000239374 FDCSPQ8NFU4 85 aa9.06□□□□□ -0.96
CCDC170-201ENST00000239374 FMC1Q96HJ9 113 aa9.06□□□□□ -0.96
CCDC170-201ENST00000239374 MCRIP2Q9BUT9 160 aaKnown RBP9.06□□□□□ -0.96
CCDC170-201ENST00000239374 CEACAM3P40198 252 aa9.06□□□□□ -0.96
CCDC170-201ENST00000239374 LGALS7P47929 136 aa9.06□□□□□ -0.96
CCDC170-201ENST00000239374 TMEM30BQ3MIR4 351 aa9.06□□□□□ -0.96
CCDC170-201ENST00000239374 RNF138Q8WVD3 245 aa9.06□□□□□ -0.96
CCDC170-201ENST00000239374 PDLIM4P50479 330 aa9.06□□□□□ -0.96
CCDC170-201ENST00000239374 MBNL2Q5VZF2 373 aaKnown RBP9.06□□□□□ -0.96
CCDC170-201ENST00000239374 CRIP3Q6Q6R5 217 aa9.06□□□□□ -0.96
CCDC170-201ENST00000239374 PRELID3AQ96N28 172 aa9.06□□□□□ -0.96
CCDC170-201ENST00000239374 A0A1B0GWJ7 208 aa9.06□□□□□ -0.96
CCDC170-201ENST00000239374 TCRBV4S1A1TA0A5B7 111 aa9.06□□□□□ -0.96
CCDC170-201ENST00000239374 C7orf71A4D174 169 aa9.06□□□□□ -0.96
CCDC170-201ENST00000239374 STPG4Q8N801 248 aa9.06□□□□□ -0.96
CCDC170-201ENST00000239374 C1orf162Q8NEQ5 155 aaPredicted RBP9.06□□□□□ -0.96
CCDC170-201ENST00000239374 MRPL27Q9P0M9 148 aaKnown RBP9.06□□□□□ -0.96
CCDC170-201ENST00000239374 COX11Q9Y6N1 276 aa9.06□□□□□ -0.96
CCDC170-201ENST00000239374 IGHV1-69-2A0A0G2JMI3 117 aa9.05□□□□□ -0.96
CCDC170-201ENST00000239374 TPTE2P1Q5T6R2 138 aa9.05□□□□□ -0.96
CCDC170-201ENST00000239374 C18orf32Q8TCD1 76 aa9.05□□□□□ -0.96
CCDC170-201ENST00000239374 V9GYV3 84 aa9.05□□□□□ -0.96
CCDC170-201ENST00000239374 YLPM1P49750 1951 aaKnown RBP9.05□□□□□ -0.96
CCDC170-201ENST00000239374 CIDEAO60543 219 aa9.05□□□□□ -0.96
CCDC170-201ENST00000239374 IL4P05112 153 aa9.05□□□□□ -0.96
CCDC170-201ENST00000239374 PLA2G5P39877 138 aa9.05□□□□□ -0.96
CCDC170-201ENST00000239374 CENPVQ7Z7K6 275 aaPredicted RBP9.05□□□□□ -0.96
CCDC170-201ENST00000239374 SPAARA0A1B0GVQ0 90 aa9.05□□□□□ -0.96
CCDC170-201ENST00000239374 SS18L1O75177 396 aaPredicted RBP9.05□□□□□ -0.96
CCDC170-201ENST00000239374 GAGE1Q13065 139 aa9.05□□□□□ -0.96
CCDC170-201ENST00000239374 SRSF9Q13242 221 aaKnown RBP eCLIP9.05□□□□□ -0.96
CCDC170-201ENST00000239374 TMUB1Q9BVT8 246 aa9.05□□□□□ -0.96
CCDC170-201ENST00000239374 TM4SF5O14894 197 aa9.05□□□□□ -0.96
CCDC170-201ENST00000239374 ZNF138P52744 262 aa9.05□□□□□ -0.96
CCDC170-201ENST00000239374 YPEL4Q96NS1 127 aa9.05□□□□□ -0.96
CCDC170-201ENST00000239374 MAP1LC3AQ9H492 121 aa9.05□□□□□ -0.96
CCDC170-201ENST00000239374 S4R3C0 116 aa9.05□□□□□ -0.96
CCDC170-201ENST00000239374 C2orf83Q53S99 150 aa9.04□□□□□ -0.96
CCDC170-201ENST00000239374 ATP5L2Q7Z4Y8 100 aa9.04□□□□□ -0.96
CCDC170-201ENST00000239374 NAA38Q9BRA0 125 aaKnown RBP9.04□□□□□ -0.96
CCDC170-201ENST00000239374 ZNF257Q9Y2Q1 563 aa9.04□□□□□ -0.96
CCDC170-201ENST00000239374 A0A087X0K7 114 aa9.04□□□□□ -0.96
CCDC170-201ENST00000239374 SMIM17P0DL12 118 aa9.04□□□□□ -0.96
CCDC170-201ENST00000239374 BMI1P35226 326 aa9.04□□□□□ -0.96
CCDC170-201ENST00000239374 HIST1H1AQ02539 215 aaPredicted RBP9.04□□□□□ -0.96
CCDC170-201ENST00000239374 RCHY1Q96PM5 261 aa9.04□□□□□ -0.96
CCDC170-201ENST00000239374 MRPS16Q9Y3D3 137 aaKnown RBP9.04□□□□□ -0.96
CCDC170-201ENST00000239374 SPCS1Q9Y6A9 102 aa9.04□□□□□ -0.96
CCDC170-201ENST00000239374 IGHV1-18A0A0C4DH31 117 aa9.04□□□□□ -0.96
CCDC170-201ENST00000239374 ERVK11-1P61568 191 aa9.04□□□□□ -0.96
CCDC170-201ENST00000239374 Q1RN00 199 aa9.04□□□□□ -0.96
CCDC170-201ENST00000239374 ASPHD1Q5U4P2 390 aa9.04□□□□□ -0.96
CCDC170-201ENST00000239374 Q6ZPA2 131 aa9.04□□□□□ -0.96
CCDC170-201ENST00000239374 OR4A5Q8NH83 315 aa9.04□□□□□ -0.96
CCDC170-201ENST00000239374 CHCHD1Q96BP2 118 aaKnown RBP9.04□□□□□ -0.96
CCDC170-201ENST00000239374 MED13LQ71F56 2210 aa9.04□□□□□ -0.96
CCDC170-201ENST00000239374 CD40P25942 277 aa9.04□□□□□ -0.96
CCDC170-201ENST00000239374 VDAC2P45880 294 aaPredicted RBP9.04□□□□□ -0.96
CCDC170-201ENST00000239374 RIPPLY3P57055 190 aa9.04□□□□□ -0.96
CCDC170-201ENST00000239374 TIMM23BQ5SRD1 257 aa9.04□□□□□ -0.96
CCDC170-201ENST00000239374 C1orf185Q5T7R7 199 aa9.04□□□□□ -0.96
CCDC170-201ENST00000239374 SPANXN1Q5VSR9 72 aa9.04□□□□□ -0.96
CCDC170-201ENST00000239374 ODF3L1Q8IXM7 274 aa9.04□□□□□ -0.96
CCDC170-201ENST00000239374 ARL6IP6Q8N6S5 226 aa9.04□□□□□ -0.96
CCDC170-201ENST00000239374 ACACAQ13085 2346 aa9.04□□□□□ -0.96
CCDC170-201ENST00000239374 IGKV1D-17A0A075B6S4 117 aa9.03□□□□□ -0.96
CCDC170-201ENST00000239374 IGHV3-35A0A0C4DH35 117 aa9.03□□□□□ -0.96
CCDC170-201ENST00000239374 SH2D7A6NKC9 451 aaPredicted RBP9.03□□□□□ -0.96
CCDC170-201ENST00000239374 TDGF1P13385 188 aa9.03□□□□□ -0.96
CCDC170-201ENST00000239374 RASL11AQ6T310 242 aa9.03□□□□□ -0.96
CCDC170-201ENST00000239374 ZCCHC24Q8N2G6 241 aaKnown RBP9.03□□□□□ -0.96
CCDC170-201ENST00000239374 FBXL15Q9H469 300 aa9.03□□□□□ -0.96
CCDC170-201ENST00000239374 LMO1P25800 156 aa9.03□□□□□ -0.96
CCDC170-201ENST00000239374 FAM27E3Q08E93 113 aa9.03□□□□□ -0.96
CCDC170-201ENST00000239374 SLAQ13239 276 aa9.03□□□□□ -0.96
CCDC170-201ENST00000239374 MEGF9Q9H1U4 602 aa9.03□□□□□ -0.96
CCDC170-201ENST00000239374 LINC00312Q9Y6C7 94 aa9.03□□□□□ -0.96
CCDC170-201ENST00000239374 SYS1-DBNDD2H3BUS1 97 aa9.03□□□□□ -0.96
CCDC170-201ENST00000239374 K7EN84 100 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms