RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 YLPM1P49750 1951 aaKnown RBP12.56□□□□□ -0.4
CTSD-201ENST00000236671 DYSFO75923 2080 aa12.55□□□□□ -0.4
CTSD-201ENST00000236671 ICE1Q9Y2F5 2266 aa12.55□□□□□ -0.4
CTSD-201ENST00000236671 CGB1A6NKQ9 187 aa12.55□□□□□ -0.4
CTSD-201ENST00000236671 FCN3O75636 299 aa12.55□□□□□ -0.4
CTSD-201ENST00000236671 CA1P00915 261 aaPredicted RBP12.55□□□□□ -0.4
CTSD-201ENST00000236671 HLA-DQA1P01909 254 aa12.55□□□□□ -0.4
CTSD-201ENST00000236671 UQCRFS1P47985 274 aa12.55□□□□□ -0.4
CTSD-201ENST00000236671 ERHP84090 104 aaKnown RBP12.55□□□□□ -0.4
CTSD-201ENST00000236671 LINC00479Q96M42 142 aa12.55□□□□□ -0.4
CTSD-201ENST00000236671 SH3BGRL2Q9UJC5 107 aa12.55□□□□□ -0.4
CTSD-201ENST00000236671 SPTAN1Q13813 2472 aaKnown RBP12.55□□□□□ -0.4
CTSD-201ENST00000236671 A0A1W2PS18 150 aa12.55□□□□□ -0.4
CTSD-201ENST00000236671 NKX6-3A6NJ46 265 aa12.55□□□□□ -0.4
CTSD-201ENST00000236671 M0QZK8 103 aa12.55□□□□□ -0.4
CTSD-201ENST00000236671 SFTPCP11686 197 aa12.55□□□□□ -0.4
CTSD-201ENST00000236671 CCL3L1P16619 93 aa12.55□□□□□ -0.4
CTSD-201ENST00000236671 SRIP30626 198 aa12.55□□□□□ -0.4
CTSD-201ENST00000236671 REG1BP48304 166 aa12.55□□□□□ -0.4
CTSD-201ENST00000236671 FNDC4Q9H6D8 234 aaPredicted RBP12.55□□□□□ -0.4
CTSD-201ENST00000236671 NRN1Q9NPD7 142 aa12.55□□□□□ -0.4
CTSD-201ENST00000236671 SERTAD4Q9NUC0 356 aa12.55□□□□□ -0.4
CTSD-201ENST00000236671 IZUMO1RA6ND01 250 aa12.54□□□□□ -0.4
CTSD-201ENST00000236671 PYYP10082 97 aa12.54□□□□□ -0.4
CTSD-201ENST00000236671 USF1P22415 310 aaPredicted RBP12.54□□□□□ -0.4
CTSD-201ENST00000236671 KRTDAPP60985 99 aa12.54□□□□□ -0.4
CTSD-201ENST00000236671 CCL8P80075 99 aa12.54□□□□□ -0.4
CTSD-201ENST00000236671 WT1-ASQ06250 92 aa12.54□□□□□ -0.4
CTSD-201ENST00000236671 MEF2CQ06413 473 aaPredicted RBP12.54□□□□□ -0.4
CTSD-201ENST00000236671 ASPHD1Q5U4P2 390 aa12.54□□□□□ -0.4
CTSD-201ENST00000236671 NUP37Q8NFH4 326 aa12.54□□□□□ -0.4
CTSD-201ENST00000236671 TMEM167AQ8TBQ9 72 aa12.54□□□□□ -0.4
CTSD-201ENST00000236671 FAM168AQ92567 244 aa12.54□□□□□ -0.4
CTSD-201ENST00000236671 ZNF355PQ9NSJ1 428 aa12.54□□□□□ -0.4
CTSD-201ENST00000236671 A0A1W2PN81 502 aa12.53□□□□□ -0.4
CTSD-201ENST00000236671 ZNF253O75346 499 aa12.53□□□□□ -0.4
CTSD-201ENST00000236671 G0S2P27469 103 aa12.53□□□□□ -0.4
CTSD-201ENST00000236671 AMTP48728 403 aa12.53□□□□□ -0.4
CTSD-201ENST00000236671 ZNF329Q86UD4 541 aa12.53□□□□□ -0.4
CTSD-201ENST00000236671 FLYWCH2Q96CP2 140 aaKnown RBP12.53□□□□□ -0.4
CTSD-201ENST00000236671 AMMECR1Q9Y4X0 333 aaPredicted RBP12.53□□□□□ -0.4
CTSD-201ENST00000236671 CENPEQ02224 2701 aa12.53□□□□□ -0.4
CTSD-201ENST00000236671 IGKV1D-37A0A075B6S9 117 aa12.53□□□□□ -0.4
CTSD-201ENST00000236671 DIRC3C9JPN6 131 aa12.53□□□□□ -0.4
CTSD-201ENST00000236671 COX7A2P2O60397 106 aa12.53□□□□□ -0.4
CTSD-201ENST00000236671 FSTL3O95633 263 aa12.53□□□□□ -0.4
CTSD-201ENST00000236671 PMCHP20382 165 aa12.53□□□□□ -0.4
CTSD-201ENST00000236671 CEACAM8P31997 349 aaPredicted RBP12.53□□□□□ -0.4
CTSD-201ENST00000236671 C10orf55Q5SWW7 151 aa12.53□□□□□ -0.4
CTSD-201ENST00000236671 TMEM200BQ69YZ2 307 aa12.53□□□□□ -0.4
CTSD-201ENST00000236671 PATE2Q6UY27 113 aa12.53□□□□□ -0.4
CTSD-201ENST00000236671 MBD6Q96DN6 1003 aa12.53□□□□□ -0.4
CTSD-201ENST00000236671 ZNF430Q9H8G1 570 aaPredicted RBP12.53□□□□□ -0.4
CTSD-201ENST00000236671 ZNF324O75467 553 aaPredicted RBP12.52□□□□□ -0.4
CTSD-201ENST00000236671 SLAQ13239 276 aa12.52□□□□□ -0.4
CTSD-201ENST00000236671 DIAPH2-AS1Q14236 149 aa12.52□□□□□ -0.4
CTSD-201ENST00000236671 C10orf113Q5VZT2 155 aa12.52□□□□□ -0.4
CTSD-201ENST00000236671 FAM231DQ6ZW35 169 aa12.52□□□□□ -0.4
CTSD-201ENST00000236671 OR4B1Q8NGF8 309 aa12.52□□□□□ -0.4
CTSD-201ENST00000236671 OR4A5Q8NH83 315 aa12.52□□□□□ -0.4
CTSD-201ENST00000236671 PAXXQ9BUH6 204 aa12.52□□□□□ -0.4
CTSD-201ENST00000236671 SSBP3Q9BWW4 388 aaPredicted RBP12.52□□□□□ -0.4
CTSD-201ENST00000236671 TCRBV4S1A1TA0A5B7 111 aa12.52□□□□□ -0.41
CTSD-201ENST00000236671 PEX7O00628 323 aa12.52□□□□□ -0.41
CTSD-201ENST00000236671 IGLV2-23P01705 113 aa12.52□□□□□ -0.41
CTSD-201ENST00000236671 APCSP02743 223 aa12.52□□□□□ -0.41
CTSD-201ENST00000236671 RPLP1P05386 114 aaKnown RBP12.52□□□□□ -0.41
CTSD-201ENST00000236671 FOSL1P15407 271 aa12.52□□□□□ -0.41
CTSD-201ENST00000236671 TNFRSF1AP19438 455 aa12.52□□□□□ -0.41
CTSD-201ENST00000236671 PDPNQ86YL7 162 aa12.52□□□□□ -0.41
CTSD-201ENST00000236671 THAP8Q8NA92 274 aa12.52□□□□□ -0.41
CTSD-201ENST00000236671 OR4C13Q8NGP0 309 aa12.52□□□□□ -0.41
CTSD-201ENST00000236671 OR1L4Q8NGR5 311 aa12.52□□□□□ -0.41
CTSD-201ENST00000236671 WIPF2Q8TF74 440 aaPredicted RBP12.52□□□□□ -0.41
CTSD-201ENST00000236671 NPIPB3Q92617 1050 aa12.52□□□□□ -0.41
CTSD-201ENST00000236671 FXYD5Q96DB9 178 aa12.52□□□□□ -0.41
CTSD-201ENST00000236671 MRPL36Q9P0J6 103 aaKnown RBP12.52□□□□□ -0.41
CTSD-201ENST00000236671 CSMD2Q7Z408 3487 aa12.51□□□□□ -0.41
CTSD-201ENST00000236671 CTRLP40313 264 aa12.51□□□□□ -0.41
CTSD-201ENST00000236671 NIT1Q86X76 327 aa12.51□□□□□ -0.41
CTSD-201ENST00000236671 LRBAP50851 2863 aa12.51□□□□□ -0.41
CTSD-201ENST00000236671 TACC2O95359 2948 aa12.5□□□□□ -0.41
CTSD-201ENST00000236671 C17orf100A8MU93 164 aa12.5□□□□□ -0.41
CTSD-201ENST00000236671 IGHV3-48P01763 117 aa12.5□□□□□ -0.41
CTSD-201ENST00000236671 REG1AP05451 166 aa12.5□□□□□ -0.41
CTSD-201ENST00000236671 BPIFB3P59826 476 aa12.5□□□□□ -0.41
CTSD-201ENST00000236671 RASL11AQ6T310 242 aa12.5□□□□□ -0.41
CTSD-201ENST00000236671 ZCCHC24Q8N2G6 241 aaKnown RBP12.5□□□□□ -0.41
CTSD-201ENST00000236671 VSTM2AQ8TAG5 236 aa12.5□□□□□ -0.41
CTSD-201ENST00000236671 TSKUQ8WUA8 353 aa12.5□□□□□ -0.41
CTSD-201ENST00000236671 ZNF331Q9NQX6 463 aaPredicted RBP12.5□□□□□ -0.41
CTSD-201ENST00000236671 NAV3Q8IVL0 2385 aa12.5□□□□□ -0.41
CTSD-201ENST00000236671 TRAV34A0A0B4J273 112 aa12.5□□□□□ -0.41
CTSD-201ENST00000236671 A6NNC1 897 aa12.5□□□□□ -0.41
CTSD-201ENST00000236671 CRYABP02511 175 aaKnown RBP12.5□□□□□ -0.41
CTSD-201ENST00000236671 ZNF25P17030 456 aaPredicted RBP12.5□□□□□ -0.41
CTSD-201ENST00000236671 ADIPOQQ15848 244 aa12.5□□□□□ -0.41
CTSD-201ENST00000236671 GDF5OSQ5U4N7 250 aa12.5□□□□□ -0.41
CTSD-201ENST00000236671 FAM71F2Q6NXP2 309 aa12.5□□□□□ -0.41
CTSD-201ENST00000236671 GFRALQ6UXV0 394 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms