RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 C1orf159Q96HA4 380 aa11.59□□□□□ -0.55
PCDHB3-201ENST00000231130 F11RQ9Y624 299 aaKnown RBP11.59□□□□□ -0.55
PCDHB3-201ENST00000231130 EP300Q09472 2414 aaPredicted RBP11.59□□□□□ -0.55
PCDHB3-201ENST00000231130 SPAARA0A1B0GVQ0 90 aa11.59□□□□□ -0.55
PCDHB3-201ENST00000231130 KIR3DS1Q14943 382 aa11.59□□□□□ -0.55
PCDHB3-201ENST00000231130 OR2Z1Q8NG97 314 aa11.59□□□□□ -0.55
PCDHB3-201ENST00000231130 OR52E5Q8NH55 327 aa11.59□□□□□ -0.55
PCDHB3-201ENST00000231130 OSTCQ9NRP0 149 aa11.59□□□□□ -0.55
PCDHB3-201ENST00000231130 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.59□□□□□ -0.55
PCDHB3-201ENST00000231130 HLA-DRB1P01911 266 aa11.59□□□□□ -0.55
PCDHB3-201ENST00000231130 WDR82Q6UXN9 313 aa11.59□□□□□ -0.55
PCDHB3-201ENST00000231130 ZNRD1Q9P1U0 126 aa11.59□□□□□ -0.55
PCDHB3-201ENST00000231130 LSM4Q9Y4Z0 139 aaKnown RBP11.59□□□□□ -0.55
PCDHB3-201ENST00000231130 A0A1W2PRE2 83 aa11.58□□□□□ -0.56
PCDHB3-201ENST00000231130 FABP2P12104 132 aa11.58□□□□□ -0.56
PCDHB3-201ENST00000231130 VDAC2P45880 294 aaPredicted RBP11.58□□□□□ -0.56
PCDHB3-201ENST00000231130 C9orf118A6NHY6 69 aa11.58□□□□□ -0.56
PCDHB3-201ENST00000231130 C9JCJ5 164 aa11.58□□□□□ -0.56
PCDHB3-201ENST00000231130 K7EP34 96 aa11.58□□□□□ -0.56
PCDHB3-201ENST00000231130 EIF4EBP1Q13541 118 aaPredicted RBP11.58□□□□□ -0.56
PCDHB3-201ENST00000231130 C1orf229Q6ZS94 237 aaPredicted RBP11.58□□□□□ -0.56
PCDHB3-201ENST00000231130 CD177Q8N6Q3 437 aa11.58□□□□□ -0.56
PCDHB3-201ENST00000231130 OR9G1Q8NH87 305 aa11.58□□□□□ -0.56
PCDHB3-201ENST00000231130 GGTLC3B5MD39 225 aa11.58□□□□□ -0.56
PCDHB3-201ENST00000231130 PRDX2P32119 198 aa11.58□□□□□ -0.56
PCDHB3-201ENST00000231130 ATP1A1-AS1Q5TC04 95 aa11.58□□□□□ -0.56
PCDHB3-201ENST00000231130 HES4Q9HCC6 221 aa11.58□□□□□ -0.56
PCDHB3-201ENST00000231130 HIGD1CA8MV81 97 aa11.57□□□□□ -0.56
PCDHB3-201ENST00000231130 APOBEC3AP31941 199 aaPredicted RBP11.57□□□□□ -0.56
PCDHB3-201ENST00000231130 MC5RP33032 325 aa11.57□□□□□ -0.56
PCDHB3-201ENST00000231130 RND1Q92730 232 aa11.57□□□□□ -0.56
PCDHB3-201ENST00000231130 NPFFR1Q9GZQ6 430 aa11.57□□□□□ -0.56
PCDHB3-201ENST00000231130 PPIAL4EA0A075B759 164 aa11.57□□□□□ -0.56
PCDHB3-201ENST00000231130 H3BTX0 84 aa11.57□□□□□ -0.56
PCDHB3-201ENST00000231130 PPIAL4FP0DN26 164 aa11.57□□□□□ -0.56
PCDHB3-201ENST00000231130 ZNF766Q5HY98 468 aa11.57□□□□□ -0.56
PCDHB3-201ENST00000231130 C11orf53Q8IXP5 236 aa11.57□□□□□ -0.56
PCDHB3-201ENST00000231130 MTURNQ8N3F0 131 aa11.57□□□□□ -0.56
PCDHB3-201ENST00000231130 NUP35Q8NFH5 326 aa11.57□□□□□ -0.56
PCDHB3-201ENST00000231130 PYYP10082 97 aa11.56□□□□□ -0.56
PCDHB3-201ENST00000231130 SEC11AP67812 179 aa11.56□□□□□ -0.56
PCDHB3-201ENST00000231130 RTL8BQ17RB0 113 aa11.56□□□□□ -0.56
PCDHB3-201ENST00000231130 GDF5OSQ5U4N7 250 aa11.56□□□□□ -0.56
PCDHB3-201ENST00000231130 TCF24Q7RTU0 167 aa11.56□□□□□ -0.56
PCDHB3-201ENST00000231130 TEX45Q8NA69 505 aa11.56□□□□□ -0.56
PCDHB3-201ENST00000231130 VSTM2AQ8TAG5 236 aa11.56□□□□□ -0.56
PCDHB3-201ENST00000231130 CHODLQ9H9P2 273 aa11.56□□□□□ -0.56
PCDHB3-201ENST00000231130 UBE2L3P68036 154 aaKnown RBP11.56□□□□□ -0.56
PCDHB3-201ENST00000231130 MORN5Q5VZ52 161 aa11.56□□□□□ -0.56
PCDHB3-201ENST00000231130 OR8A1Q8NGG7 326 aa11.56□□□□□ -0.56
PCDHB3-201ENST00000231130 OR2V2Q96R30 315 aa11.56□□□□□ -0.56
PCDHB3-201ENST00000231130 GAGE12HA6NDE8 117 aa11.56□□□□□ -0.56
PCDHB3-201ENST00000231130 IGHV1-2P23083 117 aa11.56□□□□□ -0.56
PCDHB3-201ENST00000231130 PRSS57Q6UWY2 283 aa11.56□□□□□ -0.56
PCDHB3-201ENST00000231130 BLNKQ8WV28 456 aa11.56□□□□□ -0.56
PCDHB3-201ENST00000231130 SCRT2Q9NQ03 307 aa11.56□□□□□ -0.56
PCDHB3-201ENST00000231130 SPTBN2O15020 2390 aa11.55□□□□□ -0.56
PCDHB3-201ENST00000231130 DMXL2Q8TDJ6 3036 aa11.55□□□□□ -0.56
PCDHB3-201ENST00000231130 IGHV1-24A0A0C4DH33 117 aa11.55□□□□□ -0.56
PCDHB3-201ENST00000231130 J3QR89 54 aa11.55□□□□□ -0.56
PCDHB3-201ENST00000231130 CYC1P08574 325 aa11.55□□□□□ -0.56
PCDHB3-201ENST00000231130 PET117Q6UWS5 81 aa11.55□□□□□ -0.56
PCDHB3-201ENST00000231130 IGKV1OR2-108A0A075B7D4 117 aa11.55□□□□□ -0.56
PCDHB3-201ENST00000231130 J3QR06 171 aa11.55□□□□□ -0.56
PCDHB3-201ENST00000231130 WISP2O76076 250 aa11.55□□□□□ -0.56
PCDHB3-201ENST00000231130 NMUP48645 174 aa11.55□□□□□ -0.56
PCDHB3-201ENST00000231130 GUSBP1Q15486 140 aa11.55□□□□□ -0.56
PCDHB3-201ENST00000231130 C9orf172C9J069 976 aa11.54□□□□□ -0.56
PCDHB3-201ENST00000231130 GNG5P63218 68 aa11.54□□□□□ -0.56
PCDHB3-201ENST00000231130 CHEK1O14757 476 aa11.54□□□□□ -0.56
PCDHB3-201ENST00000231130 OR5AL1P0C617 328 aa11.54□□□□□ -0.56
PCDHB3-201ENST00000231130 APELAP0DMC3 54 aa11.54□□□□□ -0.56
PCDHB3-201ENST00000231130 GCSHP23434 173 aa11.54□□□□□ -0.56
PCDHB3-201ENST00000231130 FAM214BQ7L5A3 538 aa11.54□□□□□ -0.56
PCDHB3-201ENST00000231130 RABAC1Q9UI14 185 aa11.54□□□□□ -0.56
PCDHB3-201ENST00000231130 HSPB8Q9UJY1 196 aa11.54□□□□□ -0.56
PCDHB3-201ENST00000231130 HSPE1P61604 102 aaKnown RBP11.54□□□□□ -0.56
PCDHB3-201ENST00000231130 RNFT1Q5M7Z0 435 aa11.54□□□□□ -0.56
PCDHB3-201ENST00000231130 ADAMTSL5Q6ZMM2 481 aa11.54□□□□□ -0.56
PCDHB3-201ENST00000231130 SNRNP40Q96DI7 357 aaKnown RBP11.54□□□□□ -0.56
PCDHB3-201ENST00000231130 PGLYRP4Q96LB8 373 aa11.54□□□□□ -0.56
PCDHB3-201ENST00000231130 CXXC4Q9H2H0 198 aa11.54□□□□□ -0.56
PCDHB3-201ENST00000231130 TMEM167BQ9NRX6 74 aa11.54□□□□□ -0.56
PCDHB3-201ENST00000231130 ZNF257Q9Y2Q1 563 aa11.54□□□□□ -0.56
PCDHB3-201ENST00000231130 PRSS46E5RG02 174 aa11.53□□□□□ -0.56
PCDHB3-201ENST00000231130 NTN3O00634 580 aaPredicted RBP11.53□□□□□ -0.56
PCDHB3-201ENST00000231130 AREGP15514 252 aa11.53□□□□□ -0.56
PCDHB3-201ENST00000231130 PMS2CLQ68D20 193 aa11.53□□□□□ -0.56
PCDHB3-201ENST00000231130 DUX4L9Q6RFH8 374 aaPredicted RBP11.53□□□□□ -0.56
PCDHB3-201ENST00000231130 ZNF503Q96F45 646 aa11.53□□□□□ -0.56
PCDHB3-201ENST00000231130 ZNF48Q96MX3 618 aaPredicted RBP11.53□□□□□ -0.56
PCDHB3-201ENST00000231130 SMIM27A0A1W2PRY6 76 aa11.53□□□□□ -0.56
PCDHB3-201ENST00000231130 IQCF6A8MYZ5 107 aa11.53□□□□□ -0.56
PCDHB3-201ENST00000231130 C15orf65H3BRN8 121 aa11.53□□□□□ -0.56
PCDHB3-201ENST00000231130 PSG3Q16557 428 aa11.53□□□□□ -0.56
PCDHB3-201ENST00000231130 UFSP1Q6NVU6 142 aa11.53□□□□□ -0.56
PCDHB3-201ENST00000231130 CFAP161Q6P656 301 aa11.53□□□□□ -0.56
PCDHB3-201ENST00000231130 GEMIN7Q9H840 131 aaKnown RBP11.53□□□□□ -0.56
PCDHB3-201ENST00000231130 LAMA5O15230 3695 aa11.53□□□□□ -0.56
PCDHB3-201ENST00000231130 TRGV5A0A0B4J1U4 118 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms