RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 FGF23Q9GZV9 251 aaPredicted RBP11.34□□□□□ -0.59
NFKB1-201ENST00000226574 FOXA2Q9Y261 457 aaPredicted RBP11.34□□□□□ -0.59
NFKB1-201ENST00000226574 J3QR89 54 aa11.33□□□□□ -0.6
NFKB1-201ENST00000226574 UPK2O00526 184 aa11.33□□□□□ -0.6
NFKB1-201ENST00000226574 CEACAM3P40198 252 aa11.33□□□□□ -0.6
NFKB1-201ENST00000226574 SPANXN1Q5VSR9 72 aa11.33□□□□□ -0.6
NFKB1-201ENST00000226574 TMEM208Q9BTX3 173 aa11.33□□□□□ -0.6
NFKB1-201ENST00000226574 SFXN3Q9BWM7 321 aa11.33□□□□□ -0.6
NFKB1-201ENST00000226574 NCOR2Q9Y618 2525 aa11.33□□□□□ -0.6
NFKB1-201ENST00000226574 TRBV9A0A0B4J1U6 114 aa11.33□□□□□ -0.6
NFKB1-201ENST00000226574 C3orf79P0CE67 100 aa11.33□□□□□ -0.6
NFKB1-201ENST00000226574 FOXL1Q12952 345 aa11.33□□□□□ -0.6
NFKB1-201ENST00000226574 C2orf83Q53S99 150 aa11.33□□□□□ -0.6
NFKB1-201ENST00000226574 LINC01560Q8TB33 94 aa11.33□□□□□ -0.6
NFKB1-201ENST00000226574 DCAF16Q9NXF7 216 aa11.33□□□□□ -0.6
NFKB1-201ENST00000226574 XIRP2A4UGR9 3374 aa11.33□□□□□ -0.6
NFKB1-201ENST00000226574 C7orf71A4D174 169 aa11.33□□□□□ -0.6
NFKB1-201ENST00000226574 TNFSF13O75888 250 aa11.33□□□□□ -0.6
NFKB1-201ENST00000226574 MGPP08493 103 aa11.33□□□□□ -0.6
NFKB1-201ENST00000226574 PPIFP30405 207 aaKnown RBP11.33□□□□□ -0.6
NFKB1-201ENST00000226574 KIR2DL2P43627 348 aaPredicted RBP11.33□□□□□ -0.6
NFKB1-201ENST00000226574 Q1RN00 199 aa11.33□□□□□ -0.6
NFKB1-201ENST00000226574 SORL1Q92673 2214 aa11.32□□□□□ -0.6
NFKB1-201ENST00000226574 SH2D7A6NKC9 451 aaPredicted RBP11.32□□□□□ -0.6
NFKB1-201ENST00000226574 SMIM17P0DL12 118 aa11.32□□□□□ -0.6
NFKB1-201ENST00000226574 UBTD1Q9HAC8 227 aa11.32□□□□□ -0.6
NFKB1-201ENST00000226574 LY6G6EA0A0G2JKS1 128 aa11.32□□□□□ -0.6
NFKB1-201ENST00000226574 J3QW42 95 aa11.32□□□□□ -0.6
NFKB1-201ENST00000226574 CD69Q07108 199 aa11.32□□□□□ -0.6
NFKB1-201ENST00000226574 LYPD6BQ8NI32 183 aa11.32□□□□□ -0.6
NFKB1-201ENST00000226574 CDC42EP3Q9UKI2 254 aa11.32□□□□□ -0.6
NFKB1-201ENST00000226574 U3KQA8 63 aa11.32□□□□□ -0.6
NFKB1-201ENST00000226574 PPIAL4CA0A0B4J2A2 164 aa11.32□□□□□ -0.6
NFKB1-201ENST00000226574 A6NDN8 102 aa11.32□□□□□ -0.6
NFKB1-201ENST00000226574 PPIAL4GP0DN37 164 aa11.32□□□□□ -0.6
NFKB1-201ENST00000226574 TIMM23BQ5SRD1 257 aa11.32□□□□□ -0.6
NFKB1-201ENST00000226574 DUX4L9Q6RFH8 374 aaPredicted RBP11.32□□□□□ -0.6
NFKB1-201ENST00000226574 NUDT10Q8NFP7 164 aa11.32□□□□□ -0.6
NFKB1-201ENST00000226574 NUDT11Q96G61 164 aa11.32□□□□□ -0.6
NFKB1-201ENST00000226574 GPR82Q96P67 336 aa11.32□□□□□ -0.6
NFKB1-201ENST00000226574 MRPS18CQ9Y3D5 142 aaKnown RBP11.32□□□□□ -0.6
NFKB1-201ENST00000226574 IZUMO1RA6ND01 250 aa11.31□□□□□ -0.6
NFKB1-201ENST00000226574 DLEU1O43261 78 aa11.31□□□□□ -0.6
NFKB1-201ENST00000226574 IGLV3-1P01715 115 aa11.31□□□□□ -0.6
NFKB1-201ENST00000226574 LGALS7P47929 136 aa11.31□□□□□ -0.6
NFKB1-201ENST00000226574 SRSF9Q13242 221 aaKnown RBP eCLIP11.31□□□□□ -0.6
NFKB1-201ENST00000226574 TMEM97Q5BJF2 176 aa11.31□□□□□ -0.6
NFKB1-201ENST00000226574 OSR1Q8TAX0 266 aaPredicted RBP11.31□□□□□ -0.6
NFKB1-201ENST00000226574 IGKV1D-17A0A075B6S4 117 aa11.31□□□□□ -0.6
NFKB1-201ENST00000226574 F2Z2F3 143 aa11.31□□□□□ -0.6
NFKB1-201ENST00000226574 ZNF502Q8TBZ5 544 aa11.31□□□□□ -0.6
NFKB1-201ENST00000226574 Q9H3A6 140 aa11.31□□□□□ -0.6
NFKB1-201ENST00000226574 TRAV8-6A0A0B4J262 113 aa11.31□□□□□ -0.6
NFKB1-201ENST00000226574 hDV102S1A0JD36 115 aa11.31□□□□□ -0.6
NFKB1-201ENST00000226574 SRRM5B3KS81 715 aa11.31□□□□□ -0.6
NFKB1-201ENST00000226574 EXOC3-AS1Q8N2X6 119 aa11.31□□□□□ -0.6
NFKB1-201ENST00000226574 OR10AG1Q8NH19 301 aa11.31□□□□□ -0.6
NFKB1-201ENST00000226574 ZFP30Q9Y2G7 519 aa11.31□□□□□ -0.6
NFKB1-201ENST00000226574 ZNF788Q6ZQV5 615 aa11.3□□□□□ -0.6
NFKB1-201ENST00000226574 NIT1Q86X76 327 aa11.3□□□□□ -0.6
NFKB1-201ENST00000226574 GRAMD2BQ96HH9 432 aa11.3□□□□□ -0.6
NFKB1-201ENST00000226574 C2orf88Q9BSF0 95 aa11.3□□□□□ -0.6
NFKB1-201ENST00000226574 IGHV3OR16-10A0A075B7F0 116 aa11.3□□□□□ -0.6
NFKB1-201ENST00000226574 NPSP0C0P6 89 aa11.3□□□□□ -0.6
NFKB1-201ENST00000226574 BSPH1Q075Z2 132 aa11.3□□□□□ -0.6
NFKB1-201ENST00000226574 KLF17Q5JT82 389 aaPredicted RBP11.3□□□□□ -0.6
NFKB1-201ENST00000226574 SFTA2Q6UW10 78 aa11.3□□□□□ -0.6
NFKB1-201ENST00000226574 Q6ZVH6 145 aa11.3□□□□□ -0.6
NFKB1-201ENST00000226574 SSC4DQ8WTU2 575 aa11.3□□□□□ -0.6
NFKB1-201ENST00000226574 MRPL32Q9BYC8 188 aaKnown RBP11.3□□□□□ -0.6
NFKB1-201ENST00000226574 OSTCQ9NRP0 149 aa11.3□□□□□ -0.6
NFKB1-201ENST00000226574 TLN2Q9Y4G6 2542 aa11.3□□□□□ -0.6
NFKB1-201ENST00000226574 RELQ04864 619 aaPredicted RBP11.3□□□□□ -0.6
NFKB1-201ENST00000226574 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.3□□□□□ -0.6
NFKB1-201ENST00000226574 C19orf24Q9BVV8 132 aa11.3□□□□□ -0.6
NFKB1-201ENST00000226574 CCDC168Q8NDH2 2452 aa11.3□□□□□ -0.6
NFKB1-201ENST00000226574 NUPR1O60356 82 aa11.3□□□□□ -0.6
NFKB1-201ENST00000226574 TDRG1Q3Y452 100 aa11.3□□□□□ -0.6
NFKB1-201ENST00000226574 LDLRAD2Q5SZI1 272 aa11.3□□□□□ -0.6
NFKB1-201ENST00000226574 DEFB104AQ8WTQ1 72 aa11.3□□□□□ -0.6
NFKB1-201ENST00000226574 TMEM186Q96B77 213 aa11.3□□□□□ -0.6
NFKB1-201ENST00000226574 RPP21Q9H633 154 aaKnown RBP11.3□□□□□ -0.6
NFKB1-201ENST00000226574 MBNL3Q9NUK0 354 aaKnown RBP11.3□□□□□ -0.6
NFKB1-201ENST00000226574 EML6Q6ZMW3 1958 aa11.29□□□□□ -0.6
NFKB1-201ENST00000226574 A0A1B0GUT8 65 aa11.29□□□□□ -0.6
NFKB1-201ENST00000226574 SRSF7Q16629 238 aaKnown RBP eCLIP11.29□□□□□ -0.6
NFKB1-201ENST00000226574 Q6ZS49 121 aa11.29□□□□□ -0.6
NFKB1-201ENST00000226574 DIRC2Q96SL1 478 aa11.29□□□□□ -0.6
NFKB1-201ENST00000226574 RAB1BQ9H0U4 201 aa11.29□□□□□ -0.6
NFKB1-201ENST00000226574 DENND4AQ7Z401 1863 aa11.29□□□□□ -0.6
NFKB1-201ENST00000226574 LIPFP07098 398 aa11.29□□□□□ -0.6
NFKB1-201ENST00000226574 CIARTQ8N365 385 aaPredicted RBP11.29□□□□□ -0.6
NFKB1-201ENST00000226574 ALKBH7Q9BT30 221 aaPredicted RBP11.29□□□□□ -0.6
NFKB1-201ENST00000226574 EPDR1Q9UM22 224 aa11.29□□□□□ -0.6
NFKB1-201ENST00000226574 GPX1P07203 203 aa11.29□□□□□ -0.6
NFKB1-201ENST00000226574 PLP1P60201 277 aa11.29□□□□□ -0.6
NFKB1-201ENST00000226574 WDR31Q8NA23 367 aa11.29□□□□□ -0.6
NFKB1-201ENST00000226574 FBXL7Q9UJT9 491 aa11.29□□□□□ -0.6
NFKB1-201ENST00000226574 A0A1W2PRE2 83 aa11.28□□□□□ -0.6
NFKB1-201ENST00000226574 CCL21O00585 134 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms