RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 OR1L8Q8NGR8 309 aa10.02□□□□□ -0.8
NUP88-201ENST00000225696 NPIPB3Q92617 1050 aa10.02□□□□□ -0.8
NUP88-201ENST00000225696 C7orf69Q9H7B7 122 aa10.02□□□□□ -0.8
NUP88-201ENST00000225696 NDUFA4L2Q9NRX3 87 aa10.02□□□□□ -0.8
NUP88-201ENST00000225696 MRPL27Q9P0M9 148 aaKnown RBP10.02□□□□□ -0.8
NUP88-201ENST00000225696 BSNQ9UPA5 3926 aa10.02□□□□□ -0.81
NUP88-201ENST00000225696 PEX7O00628 323 aa10.02□□□□□ -0.81
NUP88-201ENST00000225696 KLF3P57682 345 aaPredicted RBP10.02□□□□□ -0.81
NUP88-201ENST00000225696 MZT1Q08AG7 82 aa10.02□□□□□ -0.81
NUP88-201ENST00000225696 COX19Q49B96 90 aa10.02□□□□□ -0.81
NUP88-201ENST00000225696 OR8B3Q8NGG8 313 aa10.02□□□□□ -0.81
NUP88-201ENST00000225696 WIPF2Q8TF74 440 aaPredicted RBP10.02□□□□□ -0.81
NUP88-201ENST00000225696 FXYD5Q96DB9 178 aa10.02□□□□□ -0.81
NUP88-201ENST00000225696 ADTRPQ96IZ2 230 aa10.02□□□□□ -0.81
NUP88-201ENST00000225696 OR8B2Q96RD0 313 aa10.02□□□□□ -0.81
NUP88-201ENST00000225696 PAXXQ9BUH6 204 aa10.02□□□□□ -0.81
NUP88-201ENST00000225696 COMMD5Q9GZQ3 224 aa10.02□□□□□ -0.81
NUP88-201ENST00000225696 PKDREJQ9NTG1 2253 aa10.02□□□□□ -0.81
NUP88-201ENST00000225696 H0YJW9 148 aa10.01□□□□□ -0.81
NUP88-201ENST00000225696 H3BTX0 84 aa10.01□□□□□ -0.81
NUP88-201ENST00000225696 FCN3O75636 299 aa10.01□□□□□ -0.81
NUP88-201ENST00000225696 PTTG1IPP53801 180 aa10.01□□□□□ -0.81
NUP88-201ENST00000225696 FOXA3P55318 350 aaPredicted RBP10.01□□□□□ -0.81
NUP88-201ENST00000225696 RTL8BQ17RB0 113 aa10.01□□□□□ -0.81
NUP88-201ENST00000225696 OR2D3Q8NGH3 330 aa10.01□□□□□ -0.81
NUP88-201ENST00000225696 FAM222BQ8WU58 562 aa10.01□□□□□ -0.81
NUP88-201ENST00000225696 RPUSD1Q9UJJ7 312 aaKnown RBP10.01□□□□□ -0.81
NUP88-201ENST00000225696 PROCRQ9UNN8 238 aa10.01□□□□□ -0.81
NUP88-201ENST00000225696 CBY1Q9Y3M2 126 aa10.01□□□□□ -0.81
NUP88-201ENST00000225696 CNOT1A5YKK6 2376 aaKnown RBP10.01□□□□□ -0.81
NUP88-201ENST00000225696 TRAV9-2A0A087WT02 112 aa10.01□□□□□ -0.81
NUP88-201ENST00000225696 IGHV2-26A0A0B4J1V2 119 aa10.01□□□□□ -0.81
NUP88-201ENST00000225696 C20orf202A1L168 122 aa10.01□□□□□ -0.81
NUP88-201ENST00000225696 COX7A2P2O60397 106 aa10.01□□□□□ -0.81
NUP88-201ENST00000225696 FAM120AOSQ5T036 256 aa10.01□□□□□ -0.81
NUP88-201ENST00000225696 C10orf113Q5VZT2 155 aa10.01□□□□□ -0.81
NUP88-201ENST00000225696 ZNF474Q6S9Z5 364 aaPredicted RBP10.01□□□□□ -0.81
NUP88-201ENST00000225696 ZCCHC24Q8N2G6 241 aaKnown RBP10.01□□□□□ -0.81
NUP88-201ENST00000225696 OR5B3Q8NH48 314 aa10.01□□□□□ -0.81
NUP88-201ENST00000225696 BLNKQ8WV28 456 aa10.01□□□□□ -0.81
NUP88-201ENST00000225696 GRAMD2BQ96HH9 432 aa10.01□□□□□ -0.81
NUP88-201ENST00000225696 HARBI1Q96MB7 349 aa10.01□□□□□ -0.81
NUP88-201ENST00000225696 C19orf24Q9BVV8 132 aa10.01□□□□□ -0.81
NUP88-201ENST00000225696 BET1LQ9NYM9 111 aa10.01□□□□□ -0.81
NUP88-201ENST00000225696 RPH3ALQ9UNE2 315 aa10.01□□□□□ -0.81
NUP88-201ENST00000225696 PRB4P10163 310 aaPredicted RBP10□□□□□ -0.81
NUP88-201ENST00000225696 CCL3L1P16619 93 aa10□□□□□ -0.81
NUP88-201ENST00000225696 PLA2G2CQ5R387 149 aa10□□□□□ -0.81
NUP88-201ENST00000225696 FAM231DQ6ZW35 169 aa10□□□□□ -0.81
NUP88-201ENST00000225696 KLHDC1Q8N7A1 406 aa10□□□□□ -0.81
NUP88-201ENST00000225696 RITA1Q96K30 269 aa10□□□□□ -0.81
NUP88-201ENST00000225696 MCRIP2Q9BUT9 160 aaKnown RBP10□□□□□ -0.81
NUP88-201ENST00000225696 RNF7Q9UBF6 113 aa10□□□□□ -0.81
NUP88-201ENST00000225696 SVEP1Q4LDE5 3571 aa10□□□□□ -0.81
NUP88-201ENST00000225696 DLL1O00548 723 aa9.99□□□□□ -0.81
NUP88-201ENST00000225696 IGHV1-46P01743 117 aa9.99□□□□□ -0.81
NUP88-201ENST00000225696 UBE2G1P62253 170 aa9.99□□□□□ -0.81
NUP88-201ENST00000225696 KLF5Q13887 457 aaPredicted RBP9.99□□□□□ -0.81
NUP88-201ENST00000225696 ORAOV1Q8WV07 137 aa9.99□□□□□ -0.81
NUP88-201ENST00000225696 GTSF1Q8WW33 167 aa9.99□□□□□ -0.81
NUP88-201ENST00000225696 ZNF714Q96N38 554 aa9.99□□□□□ -0.81
NUP88-201ENST00000225696 MRPL32Q9BYC8 188 aaKnown RBP9.99□□□□□ -0.81
NUP88-201ENST00000225696 TPSG1Q9NRR2 321 aa9.99□□□□□ -0.81
NUP88-201ENST00000225696 MRPS16Q9Y3D3 137 aaKnown RBP9.99□□□□□ -0.81
NUP88-201ENST00000225696 COX11Q9Y6N1 276 aa9.99□□□□□ -0.81
NUP88-201ENST00000225696 LOC105371242A0A075B767 164 aa9.99□□□□□ -0.81
NUP88-201ENST00000225696 A0A1B0GXF2 115 aa9.99□□□□□ -0.81
NUP88-201ENST00000225696 MOSP00540 346 aa9.99□□□□□ -0.81
NUP88-201ENST00000225696 APELAP0DMC3 54 aa9.99□□□□□ -0.81
NUP88-201ENST00000225696 MYCNOSP40205 109 aa9.99□□□□□ -0.81
NUP88-201ENST00000225696 LEMD1Q68G75 181 aa9.99□□□□□ -0.81
NUP88-201ENST00000225696 ZNF788Q6ZQV5 615 aa9.99□□□□□ -0.81
NUP88-201ENST00000225696 LINC00305Q7Z4B0 112 aa9.99□□□□□ -0.81
NUP88-201ENST00000225696 ASCL3Q9NQ33 180 aa9.99□□□□□ -0.81
NUP88-201ENST00000225696 OR2J3O76001 311 aa9.98□□□□□ -0.81
NUP88-201ENST00000225696 ORM2P19652 201 aa9.98□□□□□ -0.81
NUP88-201ENST00000225696 GLRXP35754 106 aa9.98□□□□□ -0.81
NUP88-201ENST00000225696 RBX1P62877 108 aa9.98□□□□□ -0.81
NUP88-201ENST00000225696 TNFAIP6P98066 277 aaPredicted RBP9.98□□□□□ -0.81
NUP88-201ENST00000225696 ZNF833PQ6ZTB9 187 aa9.98□□□□□ -0.81
NUP88-201ENST00000225696 SSX8Q7RTT4 187 aa9.98□□□□□ -0.81
NUP88-201ENST00000225696 CACNG8Q8WXS5 425 aa9.98□□□□□ -0.81
NUP88-201ENST00000225696 NCOR1P1Q9H4R4 102 aa9.98□□□□□ -0.81
NUP88-201ENST00000225696 LINC00574Q9H8X3 128 aa9.98□□□□□ -0.81
NUP88-201ENST00000225696 SAP30LQ9HAJ7 183 aa9.98□□□□□ -0.81
NUP88-201ENST00000225696 IGLV3-9A0A075B6K5 115 aa9.98□□□□□ -0.81
NUP88-201ENST00000225696 IGHV3-21A0A0B4J1V1 117 aa9.98□□□□□ -0.81
NUP88-201ENST00000225696 hDV102S1A0JD36 115 aa9.98□□□□□ -0.81
NUP88-201ENST00000225696 IGLC7A0M8Q6 106 aa9.98□□□□□ -0.81
NUP88-201ENST00000225696 NKX6-3A6NJ46 265 aa9.98□□□□□ -0.81
NUP88-201ENST00000225696 C22orf46C9J442 243 aa9.98□□□□□ -0.81
NUP88-201ENST00000225696 ZNF138P52744 262 aa9.98□□□□□ -0.81
NUP88-201ENST00000225696 CCL8P80075 99 aa9.98□□□□□ -0.81
NUP88-201ENST00000225696 SARAFQ96BY9 339 aa9.98□□□□□ -0.81
NUP88-201ENST00000225696 PCNX1Q96RV3 2341 aa9.97□□□□□ -0.81
NUP88-201ENST00000225696 TCRBV4S1A1TA0A5B7 111 aa9.97□□□□□ -0.81
NUP88-201ENST00000225696 PGPA6NDG6 321 aa9.97□□□□□ -0.81
NUP88-201ENST00000225696 TOMM40O96008 361 aa9.97□□□□□ -0.81
NUP88-201ENST00000225696 CA7P43166 264 aa9.97□□□□□ -0.81
NUP88-201ENST00000225696 GATA4P43694 442 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms