RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 PXMP4Q9Y6I8 212 aa15.59■□□□□ 0.09
TNFRSF1A-201ENST00000162749 IGHV4-31P0DP07 118 aa15.58■□□□□ 0.08
TNFRSF1A-201ENST00000162749 MEF2BQ02080 365 aaPredicted RBP15.58■□□□□ 0.08
TNFRSF1A-201ENST00000162749 GCSAMLQ5JQS6 135 aa15.58■□□□□ 0.08
TNFRSF1A-201ENST00000162749 PIFOQ8TCI5 191 aa15.58■□□□□ 0.08
TNFRSF1A-201ENST00000162749 SDF2L1Q9HCN8 221 aa15.58■□□□□ 0.08
TNFRSF1A-201ENST00000162749 C5orf52A6NGY3 159 aa15.58■□□□□ 0.08
TNFRSF1A-201ENST00000162749 SOX15O60248 233 aa15.58■□□□□ 0.08
TNFRSF1A-201ENST00000162749 IGHV3-48P01763 117 aa15.58■□□□□ 0.08
TNFRSF1A-201ENST00000162749 Q8WTZ3 238 aa15.58■□□□□ 0.08
TNFRSF1A-201ENST00000162749 ARPC1AQ92747 370 aa15.58■□□□□ 0.08
TNFRSF1A-201ENST00000162749 MISP3Q96FF7 219 aa15.58■□□□□ 0.08
TNFRSF1A-201ENST00000162749 SLC35E1Q96K37 410 aa15.58■□□□□ 0.08
TNFRSF1A-201ENST00000162749 J3QLI3 93 aa15.57■□□□□ 0.08
TNFRSF1A-201ENST00000162749 YIF1AO95070 293 aa15.57■□□□□ 0.08
TNFRSF1A-201ENST00000162749 HLA-DRB1P01911 266 aa15.57■□□□□ 0.08
TNFRSF1A-201ENST00000162749 CXCL1P09341 107 aa15.57■□□□□ 0.08
TNFRSF1A-201ENST00000162749 RAB31Q13636 194 aa15.57■□□□□ 0.08
TNFRSF1A-201ENST00000162749 ACY3Q96HD9 319 aa15.57■□□□□ 0.08
TNFRSF1A-201ENST00000162749 MRPL36Q9P0J6 103 aaKnown RBP15.57■□□□□ 0.08
TNFRSF1A-201ENST00000162749 IGHV7-81A0A0B4J1V7 117 aa15.56■□□□□ 0.08
TNFRSF1A-201ENST00000162749 B4DEV8 164 aa15.56■□□□□ 0.08
TNFRSF1A-201ENST00000162749 PNRC1Q12796 327 aaPredicted RBP15.56■□□□□ 0.08
TNFRSF1A-201ENST00000162749 STPG3Q8N7X2 389 aa15.56■□□□□ 0.08
TNFRSF1A-201ENST00000162749 KCNIP2Q9NS61 270 aa15.56■□□□□ 0.08
TNFRSF1A-201ENST00000162749 CXorf65A6NEN9 183 aa15.56■□□□□ 0.08
TNFRSF1A-201ENST00000162749 CORTO00230 105 aa15.56■□□□□ 0.08
TNFRSF1A-201ENST00000162749 CYB5BO43169 146 aa15.56■□□□□ 0.08
TNFRSF1A-201ENST00000162749 RPL29P47914 159 aaKnown RBP15.56■□□□□ 0.08
TNFRSF1A-201ENST00000162749 ACOT6Q3I5F7 207 aaPredicted RBP15.56■□□□□ 0.08
TNFRSF1A-201ENST00000162749 SSX3Q99909 188 aa15.56■□□□□ 0.08
TNFRSF1A-201ENST00000162749 WNT10AQ9GZT5 417 aa15.56■□□□□ 0.08
TNFRSF1A-201ENST00000162749 URGCP-MRPS24S4R325 110 aa15.56■□□□□ 0.08
TNFRSF1A-201ENST00000162749 ACANP16112 2415 aa15.56■□□□□ 0.08
TNFRSF1A-201ENST00000162749 SONP18583 2426 aaKnown RBP15.55■□□□□ 0.08
TNFRSF1A-201ENST00000162749 SEC14L6B5MCN3 397 aa15.55■□□□□ 0.08
TNFRSF1A-201ENST00000162749 CRYGCP07315 174 aa15.55■□□□□ 0.08
TNFRSF1A-201ENST00000162749 CDC34P49427 236 aaPredicted RBP15.55■□□□□ 0.08
TNFRSF1A-201ENST00000162749 PSMB3P49720 205 aa15.55■□□□□ 0.08
TNFRSF1A-201ENST00000162749 PRR20EP86478 221 aa15.55■□□□□ 0.08
TNFRSF1A-201ENST00000162749 PRR20CP86479 221 aa15.55■□□□□ 0.08
TNFRSF1A-201ENST00000162749 PRR20DP86480 221 aa15.55■□□□□ 0.08
TNFRSF1A-201ENST00000162749 PRR20BP86481 221 aa15.55■□□□□ 0.08
TNFRSF1A-201ENST00000162749 PRR20AP86496 221 aa15.55■□□□□ 0.08
TNFRSF1A-201ENST00000162749 ASPHD1Q5U4P2 390 aa15.55■□□□□ 0.08
TNFRSF1A-201ENST00000162749 C1QL4Q86Z23 238 aa15.55■□□□□ 0.08
TNFRSF1A-201ENST00000162749 TMEM219Q86XT9 240 aa15.55■□□□□ 0.08
TNFRSF1A-201ENST00000162749 RASL11BQ9BPW5 248 aa15.55■□□□□ 0.08
TNFRSF1A-201ENST00000162749 HSPB9Q9BQS6 159 aa15.55■□□□□ 0.08
TNFRSF1A-201ENST00000162749 SLC45A2Q9UMX9 530 aa15.55■□□□□ 0.08
TNFRSF1A-201ENST00000162749 OR10J1P30954 320 aa15.54■□□□□ 0.08
TNFRSF1A-201ENST00000162749 NPIPB3Q92617 1050 aa15.54■□□□□ 0.08
TNFRSF1A-201ENST00000162749 MYO9AB2RTY4 2548 aa15.54■□□□□ 0.08
TNFRSF1A-201ENST00000162749 TGIF2-C20orf24A0A0A6YYL0 155 aa15.53■□□□□ 0.08
TNFRSF1A-201ENST00000162749 ETFRF1Q6IPR1 90 aa15.53■□□□□ 0.08
TNFRSF1A-201ENST00000162749 WFDC11Q8NEX6 87 aa15.53■□□□□ 0.08
TNFRSF1A-201ENST00000162749 RBM14Q96PK6 669 aaKnown RBP15.53■□□□□ 0.08
TNFRSF1A-201ENST00000162749 SLC25A33Q9BSK2 321 aa15.53■□□□□ 0.08
TNFRSF1A-201ENST00000162749 MANBALQ9NQG1 85 aa15.53■□□□□ 0.08
TNFRSF1A-201ENST00000162749 NOTCH2Q04721 2471 aa15.53■□□□□ 0.08
TNFRSF1A-201ENST00000162749 LINC00587B1AMM8 73 aa15.53■□□□□ 0.08
TNFRSF1A-201ENST00000162749 PAGE4O60829 102 aa15.53■□□□□ 0.08
TNFRSF1A-201ENST00000162749 EGR2P11161 476 aaPredicted RBP15.53■□□□□ 0.08
TNFRSF1A-201ENST00000162749 RPS10P46783 165 aaKnown RBP15.53■□□□□ 0.08
TNFRSF1A-201ENST00000162749 RND2P52198 227 aa15.53■□□□□ 0.08
TNFRSF1A-201ENST00000162749 FAM209BQ5JX69 171 aa15.53■□□□□ 0.08
TNFRSF1A-201ENST00000162749 C5orf56Q8N8D9 126 aa15.53■□□□□ 0.08
TNFRSF1A-201ENST00000162749 TMEM250H0YL14 139 aa15.52■□□□□ 0.08
TNFRSF1A-201ENST00000162749 UBE2CO00762 179 aa15.52■□□□□ 0.08
TNFRSF1A-201ENST00000162749 MT-CO2P00403 227 aa15.52■□□□□ 0.08
TNFRSF1A-201ENST00000162749 S100A6P06703 90 aa15.52■□□□□ 0.08
TNFRSF1A-201ENST00000162749 LINC00869P0C866 280 aa15.52■□□□□ 0.08
TNFRSF1A-201ENST00000162749 GATA2P23769 480 aaPredicted RBP15.52■□□□□ 0.08
TNFRSF1A-201ENST00000162749 TMEM116Q8NCL8 245 aa15.52■□□□□ 0.08
TNFRSF1A-201ENST00000162749 SMIM7Q9BQ49 75 aa15.52■□□□□ 0.08
TNFRSF1A-201ENST00000162749 TMEM242Q9NWH2 141 aa15.52■□□□□ 0.08
TNFRSF1A-201ENST00000162749 IGKV1D-37A0A075B6S9 117 aa15.52■□□□□ 0.07
TNFRSF1A-201ENST00000162749 IGHV3-21A0A0B4J1V1 117 aa15.52■□□□□ 0.07
TNFRSF1A-201ENST00000162749 NPIPB5A8MRT5 1133 aa15.52■□□□□ 0.07
TNFRSF1A-201ENST00000162749 ZNF674Q2M3X9 581 aa15.52■□□□□ 0.07
TNFRSF1A-201ENST00000162749 CYP2G1PQ6ZSU1 146 aa15.52■□□□□ 0.07
TNFRSF1A-201ENST00000162749 THAP8Q8NA92 274 aa15.52■□□□□ 0.07
TNFRSF1A-201ENST00000162749 OR4F5Q8NH21 305 aa15.52■□□□□ 0.07
TNFRSF1A-201ENST00000162749 OR4F4Q96R69 305 aa15.52■□□□□ 0.07
TNFRSF1A-201ENST00000162749 H3BUX3 64 aa15.51■□□□□ 0.07
TNFRSF1A-201ENST00000162749 I3L2K1 104 aa15.51■□□□□ 0.07
TNFRSF1A-201ENST00000162749 NANPQ8TBE9 248 aa15.51■□□□□ 0.07
TNFRSF1A-201ENST00000162749 RPUSD4Q96CM3 377 aaKnown RBP15.51■□□□□ 0.07
TNFRSF1A-201ENST00000162749 PARLQ9H300 379 aa15.51■□□□□ 0.07
TNFRSF1A-201ENST00000162749 NAT8Q9UHE5 227 aa15.51■□□□□ 0.07
TNFRSF1A-201ENST00000162749 MOB4Q9Y3A3 225 aa15.51■□□□□ 0.07
TNFRSF1A-201ENST00000162749 AMY1AP04745 511 aa15.51■□□□□ 0.07
TNFRSF1A-201ENST00000162749 TTC9CQ8N5M4 171 aa15.51■□□□□ 0.07
TNFRSF1A-201ENST00000162749 OR1L6Q8NGR2 347 aa15.51■□□□□ 0.07
TNFRSF1A-201ENST00000162749 SH2D7A6NKC9 451 aaPredicted RBP15.5■□□□□ 0.07
TNFRSF1A-201ENST00000162749 FABP1P07148 127 aa15.5■□□□□ 0.07
TNFRSF1A-201ENST00000162749 TMEM241Q24JQ0 296 aa15.5■□□□□ 0.07
TNFRSF1A-201ENST00000162749 A0A1W2PPV4 95 aa15.49■□□□□ 0.07
TNFRSF1A-201ENST00000162749 CLDN34H7C241 214 aa15.49■□□□□ 0.07
TNFRSF1A-201ENST00000162749 NDUFS6O75380 124 aaKnown RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 154.8 ms