RNA–Protein interactions for RNA: ENST00000640421.1

SPIN3-238, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 1,872 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-238	ENST00000640421	NECAP1	Q8NC96	275 aa		13.8	□□□□□ -0.2
SPIN3-238	ENST00000640421	CACNG8	Q8WXS5	425 aa		13.8	□□□□□ -0.2
SPIN3-238	ENST00000640421	TMEM147	Q9BVK8	224 aa		13.8	□□□□□ -0.2
SPIN3-238	ENST00000640421	GGACT	Q9BVM4	153 aa		13.8	□□□□□ -0.2
SPIN3-238	ENST00000640421	UQCC1	Q9NVA1	299 aa		13.8	□□□□□ -0.2
SPIN3-238	ENST00000640421	SMCO3	A2RU48	225 aa		13.8	□□□□□ -0.2
SPIN3-238	ENST00000640421		F8W735	103 aa	Predicted RBP	13.8	□□□□□ -0.2
SPIN3-238	ENST00000640421		H3BUA1	57 aa		13.8	□□□□□ -0.2
SPIN3-238	ENST00000640421	SCAF4	O95104	1147 aa	Known RBP	13.8	□□□□□ -0.2
SPIN3-238	ENST00000640421	HIST1H1B	P16401	226 aa	Known RBP	13.8	□□□□□ -0.2
SPIN3-238	ENST00000640421	RAB9A	P51151	201 aa		13.8	□□□□□ -0.2
SPIN3-238	ENST00000640421	TPPP2	P59282	170 aa		13.8	□□□□□ -0.2
SPIN3-238	ENST00000640421	KLHDC1	Q8N7A1	406 aa		13.8	□□□□□ -0.2
SPIN3-238	ENST00000640421	ACY3	Q96HD9	319 aa		13.8	□□□□□ -0.2
SPIN3-238	ENST00000640421	TAAR5	O14804	337 aa		13.79	□□□□□ -0.2
SPIN3-238	ENST00000640421	CYB5B	O43169	146 aa		13.79	□□□□□ -0.2
SPIN3-238	ENST00000640421	MDK	P21741	143 aa	Predicted RBP	13.79	□□□□□ -0.2
SPIN3-238	ENST00000640421	RND2	P52198	227 aa		13.79	□□□□□ -0.2
SPIN3-238	ENST00000640421	KIAA0141	Q14154	515 aa	Predicted RBP	13.79	□□□□□ -0.2
SPIN3-238	ENST00000640421	ATP6V1F	Q16864	119 aa		13.79	□□□□□ -0.2
SPIN3-238	ENST00000640421	HIST2H2BD	Q6DRA6	164 aa		13.79	□□□□□ -0.2
SPIN3-238	ENST00000640421	NPIPB3	Q92617	1050 aa		13.79	□□□□□ -0.2
SPIN3-238	ENST00000640421	ZNF471	Q9BX82	626 aa	Predicted RBP	13.79	□□□□□ -0.2
SPIN3-238	ENST00000640421	THYN1	Q9P016	225 aa		13.79	□□□□□ -0.2
SPIN3-238	ENST00000640421	RFNG	Q9Y644	331 aa		13.79	□□□□□ -0.2
SPIN3-238	ENST00000640421	RPLP1	P05386	114 aa	Known RBP	13.78	□□□□□ -0.2
SPIN3-238	ENST00000640421	SLC35B1	P78383	322 aa		13.78	□□□□□ -0.2
SPIN3-238	ENST00000640421	TCTEX1D4	Q5JR98	221 aa		13.78	□□□□□ -0.2
SPIN3-238	ENST00000640421	TEX38	Q6PEX7	206 aa		13.78	□□□□□ -0.2
SPIN3-238	ENST00000640421	PRIMA1	Q86XR5	153 aa		13.78	□□□□□ -0.2
SPIN3-238	ENST00000640421	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	13.78	□□□□□ -0.2
SPIN3-238	ENST00000640421	TMEM116	Q8NCL8	245 aa		13.78	□□□□□ -0.2
SPIN3-238	ENST00000640421	FAM223B	A6NKX1	122 aa		13.78	□□□□□ -0.2
SPIN3-238	ENST00000640421	FNDC10	F2Z333	226 aa		13.78	□□□□□ -0.2
SPIN3-238	ENST00000640421	DFFB	O76075	338 aa		13.78	□□□□□ -0.2
SPIN3-238	ENST00000640421	RUNX1	Q01196	453 aa		13.78	□□□□□ -0.2
SPIN3-238	ENST00000640421	AKR1C1	Q04828	323 aa		13.78	□□□□□ -0.2
SPIN3-238	ENST00000640421	FOXE3	Q13461	319 aa		13.78	□□□□□ -0.2
SPIN3-238	ENST00000640421	FAM223A	Q8IWN6	122 aa		13.78	□□□□□ -0.2
SPIN3-238	ENST00000640421	SLC35E1	Q96K37	410 aa		13.78	□□□□□ -0.2
SPIN3-238	ENST00000640421	CCDC140	Q96MF4	163 aa		13.78	□□□□□ -0.2
SPIN3-238	ENST00000640421	WDR61	Q9GZS3	305 aa	Known RBP	13.78	□□□□□ -0.2
SPIN3-238	ENST00000640421	SLA2	Q9H6Q3	261 aa		13.78	□□□□□ -0.2
SPIN3-238	ENST00000640421	WDR83OS	Q9Y284	106 aa		13.78	□□□□□ -0.2
SPIN3-238	ENST00000640421	LSM4	Q9Y4Z0	139 aa	Known RBP	13.78	□□□□□ -0.2
SPIN3-238	ENST00000640421	IGKV1D-37	A0A075B6S9	117 aa		13.77	□□□□□ -0.21
SPIN3-238	ENST00000640421	RPS10-NUDT3	A0A1W2PQS6	291 aa		13.77	□□□□□ -0.21
SPIN3-238	ENST00000640421	ZNF266	Q14584	549 aa		13.77	□□□□□ -0.21
SPIN3-238	ENST00000640421	ETFRF1	Q6IPR1	90 aa		13.77	□□□□□ -0.21
SPIN3-238	ENST00000640421	ACSM6	Q6P461	480 aa		13.77	□□□□□ -0.21
SPIN3-238	ENST00000640421	RNF152	Q8N8N0	203 aa		13.77	□□□□□ -0.21
SPIN3-238	ENST00000640421	UBAC2	Q8NBM4	344 aa		13.77	□□□□□ -0.21
SPIN3-238	ENST00000640421	OR5AU1	Q8NGC0	362 aa		13.77	□□□□□ -0.21
SPIN3-238	ENST00000640421	OR4F5	Q8NH21	305 aa		13.77	□□□□□ -0.21
SPIN3-238	ENST00000640421	NPVF	Q9HCQ7	196 aa		13.77	□□□□□ -0.21
SPIN3-238	ENST00000640421	C21orf62	Q9NYP8	219 aa		13.77	□□□□□ -0.21
SPIN3-238	ENST00000640421	TMEM89	A2RUT3	159 aa		13.76	□□□□□ -0.21
SPIN3-238	ENST00000640421	ELANE	P08246	267 aa		13.76	□□□□□ -0.21
SPIN3-238	ENST00000640421	TMEM144	Q7Z5S9	345 aa		13.76	□□□□□ -0.21
SPIN3-238	ENST00000640421	HSD17B11	Q8NBQ5	300 aa		13.76	□□□□□ -0.21
SPIN3-238	ENST00000640421	OR4X1	Q8NH49	305 aa		13.76	□□□□□ -0.21
SPIN3-238	ENST00000640421	ZNF502	Q8TBZ5	544 aa		13.76	□□□□□ -0.21
SPIN3-238	ENST00000640421	MYOZ3	Q8TDC0	251 aa		13.76	□□□□□ -0.21
SPIN3-238	ENST00000640421	VN1R17P	Q8TDU5	208 aa		13.76	□□□□□ -0.21
SPIN3-238	ENST00000640421	RNF114	Q9Y508	228 aa		13.76	□□□□□ -0.21
SPIN3-238	ENST00000640421	JTB	O76095	146 aa		13.76	□□□□□ -0.21
SPIN3-238	ENST00000640421	IGHV3-11	P01762	117 aa		13.76	□□□□□ -0.21
SPIN3-238	ENST00000640421	FGF7	P21781	194 aa		13.76	□□□□□ -0.21
SPIN3-238	ENST00000640421	PROK1	P58294	105 aa		13.76	□□□□□ -0.21
SPIN3-238	ENST00000640421	ATP5G2	Q06055	141 aa		13.76	□□□□□ -0.21
SPIN3-238	ENST00000640421	SLC51B	Q86UW2	128 aa		13.76	□□□□□ -0.21
SPIN3-238	ENST00000640421	MGST2	Q99735	147 aa		13.76	□□□□□ -0.21
SPIN3-238	ENST00000640421	ARV1	Q9H2C2	271 aa		13.76	□□□□□ -0.21
SPIN3-238	ENST00000640421	CLPSL1	A2RUU4	121 aa		13.75	□□□□□ -0.21
SPIN3-238	ENST00000640421	HAX1	O00165	279 aa		13.75	□□□□□ -0.21
SPIN3-238	ENST00000640421	BTNL8	Q6UX41	500 aa		13.75	□□□□□ -0.21
SPIN3-238	ENST00000640421	THAP8	Q8NA92	274 aa		13.75	□□□□□ -0.21
SPIN3-238	ENST00000640421	STOML3	Q8TAV4	291 aa		13.75	□□□□□ -0.21
SPIN3-238	ENST00000640421	RSG1	Q9BU20	258 aa		13.75	□□□□□ -0.21
SPIN3-238	ENST00000640421	SH3BGRL3	Q9H299	93 aa		13.75	□□□□□ -0.21
SPIN3-238	ENST00000640421	BORCS7-ASMT	A0A0B4J1R7	106 aa		13.74	□□□□□ -0.21
SPIN3-238	ENST00000640421	CFD	P00746	253 aa	Predicted RBP	13.74	□□□□□ -0.21
SPIN3-238	ENST00000640421	IFNA5	P01569	189 aa		13.74	□□□□□ -0.21
SPIN3-238	ENST00000640421	IGLC1	P0CG04	106 aa		13.74	□□□□□ -0.21
SPIN3-238	ENST00000640421	MFAP4	P55083	255 aa		13.74	□□□□□ -0.21
SPIN3-238	ENST00000640421	TEPP	Q6URK8	271 aa		13.74	□□□□□ -0.21
SPIN3-238	ENST00000640421	ZNF491	Q8N8L2	437 aa		13.74	□□□□□ -0.21
SPIN3-238	ENST00000640421	ST8SIA2	Q92186	375 aa		13.74	□□□□□ -0.21
SPIN3-238	ENST00000640421	USMG5	Q96IX5	58 aa		13.74	□□□□□ -0.21
SPIN3-238	ENST00000640421	CXorf58	Q96LI9	332 aa		13.74	□□□□□ -0.21
SPIN3-238	ENST00000640421	NPCDR1	Q9BY65	106 aa		13.74	□□□□□ -0.21
SPIN3-238	ENST00000640421	PARD6G	Q9BYG4	376 aa	Predicted RBP	13.74	□□□□□ -0.21
SPIN3-238	ENST00000640421	OR2T8	A6NH00	312 aa		13.74	□□□□□ -0.21
SPIN3-238	ENST00000640421	CLN5	O75503	358 aa		13.74	□□□□□ -0.21
SPIN3-238	ENST00000640421	TRBV12-3	P01733	135 aa		13.74	□□□□□ -0.21
SPIN3-238	ENST00000640421	TMEM182	Q6ZP80	229 aa	Predicted RBP	13.74	□□□□□ -0.21
SPIN3-238	ENST00000640421	C11orf44	Q8N8P7	122 aa		13.74	□□□□□ -0.21
SPIN3-238	ENST00000640421	EEF1AKMT3	Q96AZ1	226 aa		13.74	□□□□□ -0.21
SPIN3-238	ENST00000640421	GINS3	Q9BRX5	216 aa		13.74	□□□□□ -0.21
SPIN3-238	ENST00000640421	GNB4	Q9HAV0	340 aa		13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 30 ms