RNA–Protein interactions for RNA: ENST00000640413.1

AP3S1-209, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5 BASIC

Gene AP3S1, Length 489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-209ENST00000640413 SFXN4Q6P4A7 337 aa0.33□□□□□ -2.36
AP3S1-209ENST00000640413 KRTAP19-3Q7Z4W3 81 aa0.33□□□□□ -2.36
AP3S1-209ENST00000640413 TERB2Q8NHR7 220 aa0.33□□□□□ -2.36
AP3S1-209ENST00000640413 MIXL1Q9H2W2 232 aa0.33□□□□□ -2.36
AP3S1-209ENST00000640413 C11orf68Q9H3H3 251 aaKnown RBP0.33□□□□□ -2.36
AP3S1-209ENST00000640413 CDC42SE1Q9NRR8 79 aa0.33□□□□□ -2.36
AP3S1-209ENST00000640413 KMT2CQ8NEZ4 4911 aaKnown RBP0.33□□□□□ -2.36
AP3S1-209ENST00000640413 MDN1Q9NU22 5596 aa0.32□□□□□ -2.36
AP3S1-209ENST00000640413 NEBP20929 6669 aa0.32□□□□□ -2.36
AP3S1-209ENST00000640413 RYR2Q92736 4967 aa0.32□□□□□ -2.36
AP3S1-209ENST00000640413 TRAV9-1A0A075B6T8 112 aa0.32□□□□□ -2.36
AP3S1-209ENST00000640413 KCNK1O00180 336 aa0.32□□□□□ -2.36
AP3S1-209ENST00000640413 DCTN3O75935 186 aa0.32□□□□□ -2.36
AP3S1-209ENST00000640413 CRYZL1O95825 349 aa0.32□□□□□ -2.36
AP3S1-209ENST00000640413 CALB1P05937 261 aa0.32□□□□□ -2.36
AP3S1-209ENST00000640413 OR5G3P0C626 314 aa0.32□□□□□ -2.36
AP3S1-209ENST00000640413 CD79AP11912 226 aa0.32□□□□□ -2.36
AP3S1-209ENST00000640413 ZNF25P17030 456 aaPredicted RBP0.32□□□□□ -2.36
AP3S1-209ENST00000640413 S100A4P26447 101 aaKnown RBP0.32□□□□□ -2.36
AP3S1-209ENST00000640413 SPCS3P61009 180 aa0.32□□□□□ -2.36
AP3S1-209ENST00000640413 MPV17LQ2QL34 196 aa0.32□□□□□ -2.36
AP3S1-209ENST00000640413 SPATA8Q6RVD6 105 aa0.32□□□□□ -2.36
AP3S1-209ENST00000640413 TEX261Q6UWH6 196 aa0.32□□□□□ -2.36
AP3S1-209ENST00000640413 ANKRD29Q8N6D5 301 aa0.32□□□□□ -2.36
AP3S1-209ENST00000640413 Q8N6K4 173 aa0.32□□□□□ -2.36
AP3S1-209ENST00000640413 H1FXQ92522 213 aaKnown RBP0.32□□□□□ -2.36
AP3S1-209ENST00000640413 SLC35B4Q969S0 331 aa0.32□□□□□ -2.36
AP3S1-209ENST00000640413 TOMM6Q96B49 74 aa0.32□□□□□ -2.36
AP3S1-209ENST00000640413 GPR146Q96CH1 333 aa0.32□□□□□ -2.36
AP3S1-209ENST00000640413 SLC35A3Q9Y2D2 325 aa0.32□□□□□ -2.36
AP3S1-209ENST00000640413 ATP6V1DQ9Y5K8 247 aa0.32□□□□□ -2.36
AP3S1-209ENST00000640413 U3KQ87 197 aa0.32□□□□□ -2.36
AP3S1-209ENST00000640413 EML5Q05BV3 1969 aa0.32□□□□□ -2.36
AP3S1-209ENST00000640413 TEP1Q99973 2627 aaKnown RBP0.32□□□□□ -2.36
AP3S1-209ENST00000640413 MTUS2Q5JR59 1369 aa0.32□□□□□ -2.36
AP3S1-209ENST00000640413 UBR4Q5T4S7 5183 aa0.31□□□□□ -2.36
AP3S1-209ENST00000640413 E9PCH4 1651 aa0.31□□□□□ -2.36
AP3S1-209ENST00000640413 TRAV3A0A0B4J244 114 aa0.31□□□□□ -2.36
AP3S1-209ENST00000640413 TRAV12-1A0A0B4J245 112 aa0.31□□□□□ -2.36
AP3S1-209ENST00000640413 EXOC1LA0A1B0GW35 172 aa0.31□□□□□ -2.36
AP3S1-209ENST00000640413 A0A1W2PPM0 123 aa0.31□□□□□ -2.36
AP3S1-209ENST00000640413 ZNF736B4DX44 427 aaPredicted RBP0.31□□□□□ -2.36
AP3S1-209ENST00000640413 M0R2N4 97 aa0.31□□□□□ -2.36
AP3S1-209ENST00000640413 LYZL6O75951 148 aa0.31□□□□□ -2.36
AP3S1-209ENST00000640413 PSME3P61289 254 aa0.31□□□□□ -2.36
AP3S1-209ENST00000640413 SNRPD2P62316 118 aaKnown RBP0.31□□□□□ -2.36
AP3S1-209ENST00000640413 C8orf74Q6P047 294 aa0.31□□□□□ -2.36
AP3S1-209ENST00000640413 SOSTDC1Q6X4U4 206 aa0.31□□□□□ -2.36
AP3S1-209ENST00000640413 TRAPPC6BQ86SZ2 158 aa0.31□□□□□ -2.36
AP3S1-209ENST00000640413 C20orf196Q8IYI0 205 aa0.31□□□□□ -2.36
AP3S1-209ENST00000640413 OSTCQ9NRP0 149 aa0.31□□□□□ -2.36
AP3S1-209ENST00000640413 EML6Q6ZMW3 1958 aa0.31□□□□□ -2.36
AP3S1-209ENST00000640413 RIF1Q5UIP0 2472 aaKnown RBP0.31□□□□□ -2.36
AP3S1-209ENST00000640413 SONP18583 2426 aaKnown RBP0.3□□□□□ -2.36
AP3S1-209ENST00000640413 KMT2DO14686 5537 aa0.3□□□□□ -2.36
AP3S1-209ENST00000640413 INE1O15225 51 aa0.3□□□□□ -2.36
AP3S1-209ENST00000640413 RPL5P46777 297 aaKnown RBP0.3□□□□□ -2.36
AP3S1-209ENST00000640413 DEFA1P59665 94 aa0.3□□□□□ -2.36
AP3S1-209ENST00000640413 CDC42P60953 191 aa0.3□□□□□ -2.36
AP3S1-209ENST00000640413 HIST3H3Q16695 136 aa0.3□□□□□ -2.36
AP3S1-209ENST00000640413 C1orf137Q5JT78 98 aa0.3□□□□□ -2.36
AP3S1-209ENST00000640413 FAM74A1Q5RGS3 127 aa0.3□□□□□ -2.36
AP3S1-209ENST00000640413 ALKAL1Q6UXT8 129 aa0.3□□□□□ -2.36
AP3S1-209ENST00000640413 CLECL1Q8IZS7 167 aa0.3□□□□□ -2.36
AP3S1-209ENST00000640413 KRT222Q8N1A0 295 aa0.3□□□□□ -2.36
AP3S1-209ENST00000640413 LINC00301Q8NCQ3 95 aa0.3□□□□□ -2.36
AP3S1-209ENST00000640413 C4orf3Q8WVX3 66 aa0.3□□□□□ -2.36
AP3S1-209ENST00000640413 PTH2Q96A98 100 aa0.3□□□□□ -2.36
AP3S1-209ENST00000640413 OR52E6Q96RD3 313 aa0.3□□□□□ -2.36
AP3S1-209ENST00000640413 NIPSNAP1Q9BPW8 284 aa0.3□□□□□ -2.36
AP3S1-209ENST00000640413 C6orf62Q9GZU0 229 aaPredicted RBP0.3□□□□□ -2.36
AP3S1-209ENST00000640413 OR51V1Q9H2C8 321 aa0.3□□□□□ -2.36
AP3S1-209ENST00000640413 NHP2Q9NX24 153 aaKnown RBP0.3□□□□□ -2.36
AP3S1-209ENST00000640413 PKIGQ9Y2B9 76 aa0.3□□□□□ -2.36
AP3S1-209ENST00000640413 TMEM56-RWDD3S4R434 201 aa0.3□□□□□ -2.36
AP3S1-209ENST00000640413 DSTQ03001 7570 aaKnown RBP0.3□□□□□ -2.36
AP3S1-209ENST00000640413 RYR3Q15413 4870 aa0.3□□□□□ -2.36
AP3S1-209ENST00000640413 ECM29Q5VYK3 1845 aa0.29□□□□□ -2.36
AP3S1-209ENST00000640413 MUC2Q02817 5179 aa0.29□□□□□ -2.36
AP3S1-209ENST00000640413 FASNP49327 2511 aaKnown RBP0.29□□□□□ -2.36
AP3S1-209ENST00000640413 NCOR2Q9Y618 2525 aa0.29□□□□□ -2.36
AP3S1-209ENST00000640413 CEP192Q8TEP8 1941 aa0.29□□□□□ -2.36
AP3S1-209ENST00000640413 PHGR1C9JFL3 82 aa0.29□□□□□ -2.36
AP3S1-209ENST00000640413 BUB1B-PAK6H3BSN5 160 aa0.29□□□□□ -2.36
AP3S1-209ENST00000640413 FAAHO00519 579 aa0.29□□□□□ -2.36
AP3S1-209ENST00000640413 PIRO00625 290 aa0.29□□□□□ -2.36
AP3S1-209ENST00000640413 CETN3O15182 167 aa0.29□□□□□ -2.36
AP3S1-209ENST00000640413 TGOLN2O43493 480 aa0.29□□□□□ -2.36
AP3S1-209ENST00000640413 CNBPP62633 177 aaKnown RBP0.29□□□□□ -2.36
AP3S1-209ENST00000640413 KRTAP21-1Q3LI58 79 aa0.29□□□□□ -2.36
AP3S1-209ENST00000640413 CCDC122Q5T0U0 273 aa0.29□□□□□ -2.36
AP3S1-209ENST00000640413 GKN2Q86XP6 184 aa0.29□□□□□ -2.36
AP3S1-209ENST00000640413 C3orf56Q8N813 242 aa0.29□□□□□ -2.36
AP3S1-209ENST00000640413 OR10J5Q8NHC4 309 aa0.29□□□□□ -2.36
AP3S1-209ENST00000640413 TEX47Q8TBZ9 253 aa0.29□□□□□ -2.36
AP3S1-209ENST00000640413 LLPHQ9BRT6 129 aaKnown RBP0.29□□□□□ -2.36
AP3S1-209ENST00000640413 CCDC90BQ9GZT6 254 aa0.29□□□□□ -2.36
AP3S1-209ENST00000640413 GUCA1BQ9UMX6 200 aa0.29□□□□□ -2.36
AP3S1-209ENST00000640413 HS3ST2Q9Y278 367 aa0.29□□□□□ -2.36
AP3S1-209ENST00000640413 V9GYY5 206 aaPredicted RBP0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms