RNA–Protein interactions for RNA: ENST00000640036.1

SCN1A-218, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,131 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-218ENST00000640036 C1orf122Q6ZSJ8 110 aa4.19□□□□□ -1.74
SCN1A-218ENST00000640036 C1QL2Q7Z5L3 287 aa4.19□□□□□ -1.74
SCN1A-218ENST00000640036 A0A087X0M5 115 aa4.19□□□□□ -1.74
SCN1A-218ENST00000640036 A0A1B0GX30 115 aa4.19□□□□□ -1.74
SCN1A-218ENST00000640036 PLNP26678 52 aa4.19□□□□□ -1.74
SCN1A-218ENST00000640036 TMEM187Q14656 261 aa4.19□□□□□ -1.74
SCN1A-218ENST00000640036 ZNF56Q15929 161 aa4.19□□□□□ -1.74
SCN1A-218ENST00000640036 Q6AWC8 147 aa4.19□□□□□ -1.74
SCN1A-218ENST00000640036 SLC25A2Q9BXI2 301 aa4.19□□□□□ -1.74
SCN1A-218ENST00000640036 CLEC2DQ9UHP7 191 aa4.19□□□□□ -1.74
SCN1A-218ENST00000640036 IGHV2-70DA0A0C4DH43 119 aa4.19□□□□□ -1.74
SCN1A-218ENST00000640036 CCL24O00175 119 aa4.19□□□□□ -1.74
SCN1A-218ENST00000640036 IGF2P01344 180 aa4.19□□□□□ -1.74
SCN1A-218ENST00000640036 CCL18P55774 89 aa4.19□□□□□ -1.74
SCN1A-218ENST00000640036 B2MP61769 119 aa4.19□□□□□ -1.74
SCN1A-218ENST00000640036 SP6Q3SY56 376 aa4.19□□□□□ -1.74
SCN1A-218ENST00000640036 GPR82Q96P67 336 aa4.19□□□□□ -1.74
SCN1A-218ENST00000640036 C9JCJ5 164 aa4.19□□□□□ -1.74
SCN1A-218ENST00000640036 H3BMM0 161 aa4.19□□□□□ -1.74
SCN1A-218ENST00000640036 ZNF737O75373 536 aa4.19□□□□□ -1.74
SCN1A-218ENST00000640036 TDGF1P13385 188 aa4.19□□□□□ -1.74
SCN1A-218ENST00000640036 AANATQ16613 207 aa4.19□□□□□ -1.74
SCN1A-218ENST00000640036 MST1LQ2TV78 715 aa4.19□□□□□ -1.74
SCN1A-218ENST00000640036 ALKAL2Q6UX46 152 aa4.19□□□□□ -1.74
SCN1A-218ENST00000640036 GAPTQ8N292 157 aa4.19□□□□□ -1.74
SCN1A-218ENST00000640036 CHAC1Q9BUX1 264 aa4.19□□□□□ -1.74
SCN1A-218ENST00000640036 TRAF4Q9BUZ4 470 aaPredicted RBP4.19□□□□□ -1.74
SCN1A-218ENST00000640036 NPVFQ9HCQ7 196 aa4.19□□□□□ -1.74
SCN1A-218ENST00000640036 RNF222A6NCQ9 220 aa4.19□□□□□ -1.74
SCN1A-218ENST00000640036 CTDSPLO15194 276 aa4.19□□□□□ -1.74
SCN1A-218ENST00000640036 CST7O76096 145 aa4.19□□□□□ -1.74
SCN1A-218ENST00000640036 TNFRSF6BO95407 300 aa4.19□□□□□ -1.74
SCN1A-218ENST00000640036 AMBPP02760 352 aa4.19□□□□□ -1.74
SCN1A-218ENST00000640036 REG1AP05451 166 aa4.19□□□□□ -1.74
SCN1A-218ENST00000640036 HSPE1P61604 102 aaKnown RBP4.19□□□□□ -1.74
SCN1A-218ENST00000640036 SMN1Q16637 294 aaKnown RBP4.19□□□□□ -1.74
SCN1A-218ENST00000640036 SPSB3Q6PJ21 355 aa4.19□□□□□ -1.74
SCN1A-218ENST00000640036 ZNF502Q8TBZ5 544 aa4.19□□□□□ -1.74
SCN1A-218ENST00000640036 IGLV3-32A0A0A0MS00 114 aa4.18□□□□□ -1.74
SCN1A-218ENST00000640036 PAX1P15863 534 aa4.18□□□□□ -1.74
SCN1A-218ENST00000640036 SPNP16150 400 aa4.18□□□□□ -1.74
SCN1A-218ENST00000640036 SUMO2P61956 95 aaKnown RBP4.18□□□□□ -1.74
SCN1A-218ENST00000640036 RBMY1FQ15415 496 aaKnown RBP4.18□□□□□ -1.74
SCN1A-218ENST00000640036 HLA-DRB5Q30154 266 aa4.18□□□□□ -1.74
SCN1A-218ENST00000640036 OR10J3Q5JRS4 329 aa4.18□□□□□ -1.74
SCN1A-218ENST00000640036 ZNF818PQ6ZRF7 136 aa4.18□□□□□ -1.74
SCN1A-218ENST00000640036 MRGPRFQ96AM1 343 aa4.18□□□□□ -1.74
SCN1A-218ENST00000640036 ISG20L2Q9H9L3 353 aaKnown RBP4.18□□□□□ -1.74
SCN1A-218ENST00000640036 TEX48A0A1B0GUV7 120 aa4.18□□□□□ -1.74
SCN1A-218ENST00000640036 SMIM13P0DJ93 91 aa4.18□□□□□ -1.74
SCN1A-218ENST00000640036 MMP9P14780 707 aa4.18□□□□□ -1.74
SCN1A-218ENST00000640036 OPRL1P41146 370 aa4.18□□□□□ -1.74
SCN1A-218ENST00000640036 RND2P52198 227 aa4.18□□□□□ -1.74
SCN1A-218ENST00000640036 SEC11AP67812 179 aa4.18□□□□□ -1.74
SCN1A-218ENST00000640036 EFNB3Q15768 340 aa4.18□□□□□ -1.74
SCN1A-218ENST00000640036 OR51G1Q8NGK1 321 aa4.18□□□□□ -1.74
SCN1A-218ENST00000640036 AQP3Q92482 292 aa4.18□□□□□ -1.74
SCN1A-218ENST00000640036 ZNF430Q9H8G1 570 aaPredicted RBP4.18□□□□□ -1.74
SCN1A-218ENST00000640036 VAX2Q9UIW0 290 aa4.18□□□□□ -1.74
SCN1A-218ENST00000640036 CX3CL1P78423 397 aa4.18□□□□□ -1.74
SCN1A-218ENST00000640036 ARHGAP21Q5T5U3 1957 aa4.18□□□□□ -1.74
SCN1A-218ENST00000640036 TET2Q6N021 2002 aaPredicted RBP4.18□□□□□ -1.74
SCN1A-218ENST00000640036 TRBV7-9A0A0J9YWB2 115 aa4.18□□□□□ -1.74
SCN1A-218ENST00000640036 KBTBD11O94819 623 aa4.18□□□□□ -1.74
SCN1A-218ENST00000640036 IGHV3-23P01764 117 aa4.18□□□□□ -1.74
SCN1A-218ENST00000640036 CKS2P33552 79 aa4.18□□□□□ -1.74
SCN1A-218ENST00000640036 LEPP41159 167 aa4.18□□□□□ -1.74
SCN1A-218ENST00000640036 KLRD1Q13241 179 aa4.18□□□□□ -1.74
SCN1A-218ENST00000640036 TMEM229BQ8NBD8 167 aa4.18□□□□□ -1.74
SCN1A-218ENST00000640036 OR51M1Q9H341 326 aa4.18□□□□□ -1.74
SCN1A-218ENST00000640036 CDS2O95674 445 aa4.18□□□□□ -1.74
SCN1A-218ENST00000640036 MFAP2P55001 183 aa4.18□□□□□ -1.74
SCN1A-218ENST00000640036 FAM74A4Q5TZK3 123 aa4.18□□□□□ -1.74
SCN1A-218ENST00000640036 CD5LO43866 347 aa4.18□□□□□ -1.74
SCN1A-218ENST00000640036 HLA-DRB1P01911 266 aa4.18□□□□□ -1.74
SCN1A-218ENST00000640036 FOLR2P14207 255 aa4.18□□□□□ -1.74
SCN1A-218ENST00000640036 TPTE2P1Q5T6R2 138 aa4.18□□□□□ -1.74
SCN1A-218ENST00000640036 MORN3Q6PF18 240 aaPredicted RBP4.18□□□□□ -1.74
SCN1A-218ENST00000640036 C10orf111Q8N326 155 aa4.18□□□□□ -1.74
SCN1A-218ENST00000640036 NRGNQ92686 78 aa4.18□□□□□ -1.74
SCN1A-218ENST00000640036 DMRTA2Q96SC8 542 aa4.18□□□□□ -1.74
SCN1A-218ENST00000640036 MRPL16Q9NX20 251 aaKnown RBP4.18□□□□□ -1.74
SCN1A-218ENST00000640036 IGHV4-30-2A0A087WSY4 118 aa4.17□□□□□ -1.74
SCN1A-218ENST00000640036 TRBV7-1A0A0A6YYK4 115 aa4.17□□□□□ -1.74
SCN1A-218ENST00000640036 BSXQ3C1V8 233 aa4.17□□□□□ -1.74
SCN1A-218ENST00000640036 DNLZQ5SXM8 178 aa4.17□□□□□ -1.74
SCN1A-218ENST00000640036 PRSS45Q7RTY3 260 aa4.17□□□□□ -1.74
SCN1A-218ENST00000640036 OR52I2Q8NH67 350 aa4.17□□□□□ -1.74
SCN1A-218ENST00000640036 PTX4Q96A99 478 aa4.17□□□□□ -1.74
SCN1A-218ENST00000640036 TBX15Q96SF7 602 aa4.17□□□□□ -1.74
SCN1A-218ENST00000640036 CCL28Q9NRJ3 127 aa4.17□□□□□ -1.74
SCN1A-218ENST00000640036 PAM16Q9Y3D7 125 aa4.17□□□□□ -1.74
SCN1A-218ENST00000640036 IGHV2-26A0A0B4J1V2 119 aa4.17□□□□□ -1.74
SCN1A-218ENST00000640036 CDC42EP2O14613 210 aa4.17□□□□□ -1.74
SCN1A-218ENST00000640036 RRHO14718 337 aa4.17□□□□□ -1.74
SCN1A-218ENST00000640036 LINC00869P0C866 280 aa4.17□□□□□ -1.74
SCN1A-218ENST00000640036 CD300LDQ6UXZ3 194 aa4.17□□□□□ -1.74
SCN1A-218ENST00000640036 NECAP1Q8NC96 275 aa4.17□□□□□ -1.74
SCN1A-218ENST00000640036 CITED1Q99966 193 aa4.17□□□□□ -1.74
SCN1A-218ENST00000640036 WNT10AQ9GZT5 417 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms