RNA–Protein interactions for RNA: ENST00000638546.1

HCG27-205, Transcript of HLA complex group 27, humanhuman

TSL 1 (best)

Gene HCG27, Length 1,641 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-205ENST00000638546 SELENOTP62341 195 aa13.2□□□□□ -0.3
HCG27-205ENST00000638546 PAX8Q06710 450 aa13.2□□□□□ -0.3
HCG27-205ENST00000638546 FXYD3Q14802 87 aa13.2□□□□□ -0.3
HCG27-205ENST00000638546 MIR17HGQ75NE6 70 aa13.2□□□□□ -0.3
HCG27-205ENST00000638546 RNF2Q99496 336 aa13.2□□□□□ -0.3
HCG27-205ENST00000638546 SLC25A33Q9BSK2 321 aa13.2□□□□□ -0.3
HCG27-205ENST00000638546 TECRQ9NZ01 308 aaKnown RBP13.2□□□□□ -0.3
HCG27-205ENST00000638546 DOPEY1Q5JWR5 2465 aa13.2□□□□□ -0.3
HCG27-205ENST00000638546 ARHGAP32A7KAX9 2087 aa13.19□□□□□ -0.3
HCG27-205ENST00000638546 IGKV1D-37A0A075B6S9 117 aa13.19□□□□□ -0.3
HCG27-205ENST00000638546 ZNF727A8MUV8 499 aa13.19□□□□□ -0.3
HCG27-205ENST00000638546 IGHV3-48P01763 117 aa13.19□□□□□ -0.3
HCG27-205ENST00000638546 OR5G3P0C626 314 aa13.19□□□□□ -0.3
HCG27-205ENST00000638546 FAM106CPP0CH98 169 aa13.19□□□□□ -0.3
HCG27-205ENST00000638546 PNRC1Q12796 327 aaPredicted RBP13.19□□□□□ -0.3
HCG27-205ENST00000638546 C19orf35Q6ZS72 473 aa13.19□□□□□ -0.3
HCG27-205ENST00000638546 C15orf54Q8N8G6 183 aa13.19□□□□□ -0.3
HCG27-205ENST00000638546 AJUBAQ96IF1 538 aa13.19□□□□□ -0.3
HCG27-205ENST00000638546 TXNDC17Q9BRA2 123 aa13.19□□□□□ -0.3
HCG27-205ENST00000638546 MRPL36Q9P0J6 103 aaKnown RBP13.19□□□□□ -0.3
HCG27-205ENST00000638546 COL12A1Q99715 3063 aa13.19□□□□□ -0.3
HCG27-205ENST00000638546 A0A087WWC5 75 aa13.18□□□□□ -0.3
HCG27-205ENST00000638546 COLCA2A8K830 154 aa13.18□□□□□ -0.3
HCG27-205ENST00000638546 B4DEV8 164 aa13.18□□□□□ -0.3
HCG27-205ENST00000638546 NPFFO15130 113 aa13.18□□□□□ -0.3
HCG27-205ENST00000638546 PDE6DO43924 150 aa13.18□□□□□ -0.3
HCG27-205ENST00000638546 CLN5O75503 358 aa13.18□□□□□ -0.3
HCG27-205ENST00000638546 TMEM11P17152 192 aa13.18□□□□□ -0.3
HCG27-205ENST00000638546 BRS3P32247 399 aa13.18□□□□□ -0.3
HCG27-205ENST00000638546 DSCR9P59020 149 aa13.18□□□□□ -0.3
HCG27-205ENST00000638546 UBE2G2P60604 165 aa13.18□□□□□ -0.3
HCG27-205ENST00000638546 FBLN7Q53RD9 439 aa13.18□□□□□ -0.3
HCG27-205ENST00000638546 CST9LP1Q5W188 147 aa13.18□□□□□ -0.3
HCG27-205ENST00000638546 OR1L6Q8NGR2 347 aa13.18□□□□□ -0.3
HCG27-205ENST00000638546 MRPL32Q9BYC8 188 aaKnown RBP13.18□□□□□ -0.3
HCG27-205ENST00000638546 WNT10AQ9GZT5 417 aa13.18□□□□□ -0.3
HCG27-205ENST00000638546 SDF2L1Q9HCN8 221 aa13.18□□□□□ -0.3
HCG27-205ENST00000638546 DNAJC4Q9NNZ3 241 aa13.18□□□□□ -0.3
HCG27-205ENST00000638546 IGHV4-30-2A0A087WSY4 118 aa13.17□□□□□ -0.3
HCG27-205ENST00000638546 NCBP2LA6PVI3 153 aaKnown RBP13.17□□□□□ -0.3
HCG27-205ENST00000638546 F6UZH7 168 aa13.17□□□□□ -0.3
HCG27-205ENST00000638546 PAX1P15863 534 aa13.17□□□□□ -0.3
HCG27-205ENST00000638546 CTRB1P17538 263 aa13.17□□□□□ -0.3
HCG27-205ENST00000638546 SAA4P35542 130 aa13.17□□□□□ -0.3
HCG27-205ENST00000638546 TAS2R45P59539 299 aa13.17□□□□□ -0.3
HCG27-205ENST00000638546 TMEM241Q24JQ0 296 aa13.17□□□□□ -0.3
HCG27-205ENST00000638546 CTRB2Q6GPI1 263 aa13.17□□□□□ -0.3
HCG27-205ENST00000638546 ZNF562Q6V9R5 426 aa13.17□□□□□ -0.3
HCG27-205ENST00000638546 TMEM116Q8NCL8 245 aa13.17□□□□□ -0.3
HCG27-205ENST00000638546 OR1L4Q8NGR5 311 aa13.17□□□□□ -0.3
HCG27-205ENST00000638546 TRGV9Q99603 122 aa13.17□□□□□ -0.3
HCG27-205ENST00000638546 SMIM7Q9BQ49 75 aa13.17□□□□□ -0.3
HCG27-205ENST00000638546 TNFRSF19Q9NS68 423 aa13.17□□□□□ -0.3
HCG27-205ENST00000638546 NAT8Q9UHE5 227 aa13.17□□□□□ -0.3
HCG27-205ENST00000638546 MAST4O15021 2626 aa13.17□□□□□ -0.3
HCG27-205ENST00000638546 TENM4Q6N022 2769 aa13.17□□□□□ -0.3
HCG27-205ENST00000638546 ZNF90Q03938 601 aa13.17□□□□□ -0.3
HCG27-205ENST00000638546 ZNF674Q2M3X9 581 aa13.17□□□□□ -0.3
HCG27-205ENST00000638546 RPUSD4Q96CM3 377 aaKnown RBP13.17□□□□□ -0.3
HCG27-205ENST00000638546 PERPQ96FX8 193 aa13.17□□□□□ -0.3
HCG27-205ENST00000638546 PFDN5Q99471 154 aa13.17□□□□□ -0.3
HCG27-205ENST00000638546 TMEM167BQ9NRX6 74 aa13.17□□□□□ -0.3
HCG27-205ENST00000638546 C1RLQ9NZP8 487 aa13.17□□□□□ -0.3
HCG27-205ENST00000638546 DMRT1Q9Y5R6 373 aa13.17□□□□□ -0.3
HCG27-205ENST00000638546 CENPVL3A0A0U1RRI6 287 aa13.16□□□□□ -0.3
HCG27-205ENST00000638546 PSMB11A5LHX3 300 aa13.16□□□□□ -0.3
HCG27-205ENST00000638546 OR2C1O95371 312 aa13.16□□□□□ -0.3
HCG27-205ENST00000638546 C8orf88P0DMB2 117 aa13.16□□□□□ -0.3
HCG27-205ENST00000638546 ATP5G3P48201 142 aa13.16□□□□□ -0.3
HCG27-205ENST00000638546 FAM120AOSQ5T036 256 aa13.16□□□□□ -0.3
HCG27-205ENST00000638546 OR4X1Q8NH49 305 aa13.16□□□□□ -0.3
HCG27-205ENST00000638546 TMEM37Q8WXS4 190 aa13.16□□□□□ -0.3
HCG27-205ENST00000638546 PARLQ9H300 379 aa13.16□□□□□ -0.3
HCG27-205ENST00000638546 LOC105371267A0A1B0GV96 52 aa13.15□□□□□ -0.3
HCG27-205ENST00000638546 I3L2K1 104 aa13.15□□□□□ -0.3
HCG27-205ENST00000638546 COX7A2P2O60397 106 aa13.15□□□□□ -0.3
HCG27-205ENST00000638546 BPIFB3P59826 476 aa13.15□□□□□ -0.3
HCG27-205ENST00000638546 CX3CL1P78423 397 aa13.15□□□□□ -0.3
HCG27-205ENST00000638546 PQLC2Q6ZP29 291 aa13.15□□□□□ -0.3
HCG27-205ENST00000638546 ARPC1AQ92747 370 aa13.15□□□□□ -0.3
HCG27-205ENST00000638546 LRRK2Q5S007 2527 aa13.15□□□□□ -0.3
HCG27-205ENST00000638546 IGHV3-21A0A0B4J1V1 117 aa13.14□□□□□ -0.31
HCG27-205ENST00000638546 NPPCP23582 126 aa13.14□□□□□ -0.31
HCG27-205ENST00000638546 C10orf113Q5VZT2 155 aa13.14□□□□□ -0.31
HCG27-205ENST00000638546 RUSC1-AS1Q66K80 236 aa13.14□□□□□ -0.31
HCG27-205ENST00000638546 PIP4P2Q8N4L2 257 aa13.14□□□□□ -0.31
HCG27-205ENST00000638546 YTHDF2Q9Y5A9 579 aaKnown RBP13.14□□□□□ -0.31
HCG27-205ENST00000638546 ARL2-SNX15V9GYD0 113 aa13.14□□□□□ -0.31
HCG27-205ENST00000638546 NAV2Q8IVL1 2488 aa13.14□□□□□ -0.31
HCG27-205ENST00000638546 A1L4Q6 167 aa13.13□□□□□ -0.31
HCG27-205ENST00000638546 NPIPB5A8MRT5 1133 aa13.13□□□□□ -0.31
HCG27-205ENST00000638546 MT-ND4LP03901 98 aa13.13□□□□□ -0.31
HCG27-205ENST00000638546 HIST1H2BAQ96A08 127 aa13.13□□□□□ -0.31
HCG27-205ENST00000638546 ISOC2Q96AB3 205 aa13.13□□□□□ -0.31
HCG27-205ENST00000638546 FAM103A1Q9BTL3 118 aaKnown RBP13.13□□□□□ -0.31
HCG27-205ENST00000638546 SPTAN1Q13813 2472 aaKnown RBP13.13□□□□□ -0.31
HCG27-205ENST00000638546 ELOA3CA0A087WX78 387 aaPredicted RBP13.13□□□□□ -0.31
HCG27-205ENST00000638546 IGHV1-69DA0A0B4J2H0 117 aa13.13□□□□□ -0.31
HCG27-205ENST00000638546 CXorf65A6NEN9 183 aa13.13□□□□□ -0.31
HCG27-205ENST00000638546 OR7C2O60412 319 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms