RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 RHPN1-AS1Q9BWJ2 59 aa12.5□□□□□ -0.41
CACNA1A-259ENST00000638114 PRR13Q9NZ81 148 aa12.5□□□□□ -0.41
CACNA1A-259ENST00000638114 TMEM56-RWDD3S4R434 201 aa12.5□□□□□ -0.41
CACNA1A-259ENST00000638114 TRAV14DV4A0A0A6YYC5 116 aa12.49□□□□□ -0.41
CACNA1A-259ENST00000638114 CHEK1O14757 476 aa12.49□□□□□ -0.41
CACNA1A-259ENST00000638114 AP3S2P59780 193 aa12.49□□□□□ -0.41
CACNA1A-259ENST00000638114 TMEM187Q14656 261 aa12.49□□□□□ -0.41
CACNA1A-259ENST00000638114 AARDQ4LEZ3 155 aa12.49□□□□□ -0.41
CACNA1A-259ENST00000638114 TOMM20LQ6UXN7 152 aa12.49□□□□□ -0.41
CACNA1A-259ENST00000638114 ZNF600Q6ZNG1 722 aa12.49□□□□□ -0.41
CACNA1A-259ENST00000638114 IL22RA2Q969J5 263 aa12.49□□□□□ -0.41
CACNA1A-259ENST00000638114 GALNT14Q96FL9 552 aa12.49□□□□□ -0.41
CACNA1A-259ENST00000638114 RNF2Q99496 336 aa12.49□□□□□ -0.41
CACNA1A-259ENST00000638114 GINS3Q9BRX5 216 aa12.49□□□□□ -0.41
CACNA1A-259ENST00000638114 HEYLQ9NQ87 328 aaPredicted RBP12.49□□□□□ -0.41
CACNA1A-259ENST00000638114 V9GYH0 126 aa12.49□□□□□ -0.41
CACNA1A-259ENST00000638114 IGHV3OR16-13A0A075B7E8 117 aa12.48□□□□□ -0.41
CACNA1A-259ENST00000638114 IGHV3-74A0A0B4J1X5 117 aa12.48□□□□□ -0.41
CACNA1A-259ENST00000638114 CEBPZOSA8MTT3 80 aa12.48□□□□□ -0.41
CACNA1A-259ENST00000638114 NXPH3O95157 252 aa12.48□□□□□ -0.41
CACNA1A-259ENST00000638114 TMEM50AO95807 157 aa12.48□□□□□ -0.41
CACNA1A-259ENST00000638114 HTR2BP41595 481 aa12.48□□□□□ -0.41
CACNA1A-259ENST00000638114 KLF9Q13886 244 aaPredicted RBP12.48□□□□□ -0.41
CACNA1A-259ENST00000638114 BSXQ3C1V8 233 aa12.48□□□□□ -0.41
CACNA1A-259ENST00000638114 TOMM5Q8N4H5 51 aa12.48□□□□□ -0.41
CACNA1A-259ENST00000638114 TRIM63Q969Q1 353 aa12.48□□□□□ -0.41
CACNA1A-259ENST00000638114 RBM38Q9H0Z9 239 aaKnown RBP12.48□□□□□ -0.41
CACNA1A-259ENST00000638114 FNDC4Q9H6D8 234 aaPredicted RBP12.48□□□□□ -0.41
CACNA1A-259ENST00000638114 PUS1Q9Y606 427 aaKnown RBP eCLIP12.48□□□□□ -0.41
CACNA1A-259ENST00000638114 RYR3Q15413 4870 aa12.48□□□□□ -0.41
CACNA1A-259ENST00000638114 IGKV3-7A0A075B6H7 116 aa12.47□□□□□ -0.41
CACNA1A-259ENST00000638114 SULT1A3P0DMM9 295 aa12.47□□□□□ -0.41
CACNA1A-259ENST00000638114 SULT1A4P0DMN0 295 aa12.47□□□□□ -0.41
CACNA1A-259ENST00000638114 BMI1P35226 326 aa12.47□□□□□ -0.41
CACNA1A-259ENST00000638114 TFPI2P48307 235 aa12.47□□□□□ -0.41
CACNA1A-259ENST00000638114 MLANAQ16655 118 aa12.47□□□□□ -0.41
CACNA1A-259ENST00000638114 ODF3L2Q3SX64 289 aa12.47□□□□□ -0.41
CACNA1A-259ENST00000638114 MRPL36Q9P0J6 103 aaKnown RBP12.47□□□□□ -0.41
CACNA1A-259ENST00000638114 RPS10-NUDT3A0A1W2PQS6 291 aa12.46□□□□□ -0.41
CACNA1A-259ENST00000638114 CLN5O75503 358 aa12.46□□□□□ -0.41
CACNA1A-259ENST00000638114 SCGB2A1O75556 95 aa12.46□□□□□ -0.41
CACNA1A-259ENST00000638114 ANXA3P12429 323 aa12.46□□□□□ -0.41
CACNA1A-259ENST00000638114 SUPT4H1P63272 117 aaKnown RBP12.46□□□□□ -0.41
CACNA1A-259ENST00000638114 ZNF79Q15937 498 aa12.46□□□□□ -0.41
CACNA1A-259ENST00000638114 TMED4Q7Z7H5 227 aa12.46□□□□□ -0.41
CACNA1A-259ENST00000638114 SLC24A4Q8NFF2 622 aa12.46□□□□□ -0.41
CACNA1A-259ENST00000638114 OR4X1Q8NH49 305 aa12.46□□□□□ -0.41
CACNA1A-259ENST00000638114 ZFAND3Q9H8U3 227 aa12.46□□□□□ -0.41
CACNA1A-259ENST00000638114 A0A0B4J2A0 478 aa12.45□□□□□ -0.42
CACNA1A-259ENST00000638114 A0A1B0GU03 582 aa12.45□□□□□ -0.42
CACNA1A-259ENST00000638114 SRPXP78539 464 aa12.45□□□□□ -0.42
CACNA1A-259ENST00000638114 C2orf83Q53S99 150 aa12.45□□□□□ -0.42
CACNA1A-259ENST00000638114 TCF24Q7RTU0 167 aa12.45□□□□□ -0.42
CACNA1A-259ENST00000638114 LYZL2Q7Z4W2 148 aa12.45□□□□□ -0.42
CACNA1A-259ENST00000638114 CCDC190Q86UF4 302 aa12.45□□□□□ -0.42
CACNA1A-259ENST00000638114 LGI3Q8N145 548 aa12.45□□□□□ -0.42
CACNA1A-259ENST00000638114 ST8SIA2Q92186 375 aa12.45□□□□□ -0.42
CACNA1A-259ENST00000638114 CACFD1Q9UGQ2 172 aa12.45□□□□□ -0.42
CACNA1A-259ENST00000638114 SHPKQ9UHJ6 478 aa12.45□□□□□ -0.42
CACNA1A-259ENST00000638114 IGHV3-66A0A0C4DH42 116 aa12.44□□□□□ -0.42
CACNA1A-259ENST00000638114 ZNF701M0R085 212 aaPredicted RBP12.44□□□□□ -0.42
CACNA1A-259ENST00000638114 APOHP02749 345 aaPredicted RBP12.44□□□□□ -0.42
CACNA1A-259ENST00000638114 NPY1RP25929 384 aa12.44□□□□□ -0.42
CACNA1A-259ENST00000638114 CCR6P51684 374 aa12.44□□□□□ -0.42
CACNA1A-259ENST00000638114 APOC4P55056 127 aa12.44□□□□□ -0.42
CACNA1A-259ENST00000638114 SMCO1Q147U7 214 aa12.44□□□□□ -0.42
CACNA1A-259ENST00000638114 NMSQ5H8A3 153 aa12.44□□□□□ -0.42
CACNA1A-259ENST00000638114 FAM90A2PQ658T7 463 aa12.44□□□□□ -0.42
CACNA1A-259ENST00000638114 GBGT1Q8N5D6 347 aa12.44□□□□□ -0.42
CACNA1A-259ENST00000638114 RNASEH2CQ8TDP1 164 aaKnown RBP12.44□□□□□ -0.42
CACNA1A-259ENST00000638114 CSMD3Q7Z407 3707 aa12.44□□□□□ -0.42
CACNA1A-259ENST00000638114 TRAV30A0A087WSZ9 112 aa12.43□□□□□ -0.42
CACNA1A-259ENST00000638114 PAFAH1B2P68402 229 aa12.43□□□□□ -0.42
CACNA1A-259ENST00000638114 TNFRSF9Q07011 255 aa12.43□□□□□ -0.42
CACNA1A-259ENST00000638114 TIGITQ495A1 244 aa12.43□□□□□ -0.42
CACNA1A-259ENST00000638114 SPANXN2Q5MJ10 180 aa12.43□□□□□ -0.42
CACNA1A-259ENST00000638114 OVOL2Q9BRP0 275 aa12.43□□□□□ -0.42
CACNA1A-259ENST00000638114 TMEM231Q9H6L2 316 aa12.43□□□□□ -0.42
CACNA1A-259ENST00000638114 VSIRQ9H7M9 311 aa12.43□□□□□ -0.42
CACNA1A-259ENST00000638114 STARD9Q9P2P6 4700 aa12.43□□□□□ -0.42
CACNA1A-259ENST00000638114 IFNA10P01566 189 aa12.42□□□□□ -0.42
CACNA1A-259ENST00000638114 IGKV1-17P01599 117 aa12.42□□□□□ -0.42
CACNA1A-259ENST00000638114 CD5P06127 495 aa12.42□□□□□ -0.42
CACNA1A-259ENST00000638114 SLC25A4P12235 298 aa12.42□□□□□ -0.42
CACNA1A-259ENST00000638114 RPL35AP18077 110 aaKnown RBP12.42□□□□□ -0.42
CACNA1A-259ENST00000638114 NPPCP23582 126 aa12.42□□□□□ -0.42
CACNA1A-259ENST00000638114 VAMP1P23763 118 aa12.42□□□□□ -0.42
CACNA1A-259ENST00000638114 RND2P52198 227 aa12.42□□□□□ -0.42
CACNA1A-259ENST00000638114 RPL11P62913 178 aaKnown RBP12.42□□□□□ -0.42
CACNA1A-259ENST00000638114 TMEM128Q5BJH2 165 aa12.42□□□□□ -0.42
CACNA1A-259ENST00000638114 PRSS54Q6PEW0 395 aa12.42□□□□□ -0.42
CACNA1A-259ENST00000638114 NOXA1Q86UR1 476 aa12.42□□□□□ -0.42
CACNA1A-259ENST00000638114 WFDC3Q8IUB2 231 aa12.42□□□□□ -0.42
CACNA1A-259ENST00000638114 APRG1Q8IVJ8 170 aa12.42□□□□□ -0.42
CACNA1A-259ENST00000638114 LILRB2Q8N423 598 aa12.42□□□□□ -0.42
CACNA1A-259ENST00000638114 TMEM170AQ8WVE7 144 aa12.42□□□□□ -0.42
CACNA1A-259ENST00000638114 DEDD2Q8WXF8 326 aa12.42□□□□□ -0.42
CACNA1A-259ENST00000638114 METTL26Q96S19 204 aa12.42□□□□□ -0.42
CACNA1A-259ENST00000638114 SLC25A21Q9BQT8 299 aaPredicted RBP12.42□□□□□ -0.42
CACNA1A-259ENST00000638114 HSPB7Q9UBY9 170 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms