RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 HNF1AP20823 631 aa17.25■□□□□ 0.35
CLN6-224ENST00000638076 CDX1P47902 265 aaPredicted RBP17.25■□□□□ 0.35
CLN6-224ENST00000638076 ARF6P62330 175 aa17.25■□□□□ 0.35
CLN6-224ENST00000638076 PPP1R27Q86WC6 154 aa17.25■□□□□ 0.35
CLN6-224ENST00000638076 MRPL41Q8IXM3 137 aaKnown RBP17.25■□□□□ 0.35
CLN6-224ENST00000638076 OCC1Q8TAD7 63 aa17.25■□□□□ 0.35
CLN6-224ENST00000638076 SFRP2Q96HF1 295 aa17.25■□□□□ 0.35
CLN6-224ENST00000638076 DNAJC4Q9NNZ3 241 aa17.25■□□□□ 0.35
CLN6-224ENST00000638076 HRNRQ86YZ3 2850 aaPredicted RBP17.25■□□□□ 0.35
CLN6-224ENST00000638076 COMPP49747 757 aaPredicted RBP17.24■□□□□ 0.35
CLN6-224ENST00000638076 MORN5Q5VZ52 161 aa17.24■□□□□ 0.35
CLN6-224ENST00000638076 OR2T10Q8NGZ9 312 aa17.24■□□□□ 0.35
CLN6-224ENST00000638076 MRPL32Q9BYC8 188 aaKnown RBP17.24■□□□□ 0.35
CLN6-224ENST00000638076 TACC2O95359 2948 aa17.24■□□□□ 0.35
CLN6-224ENST00000638076 GGCTO75223 188 aaKnown RBP17.24■□□□□ 0.35
CLN6-224ENST00000638076 LDLRAD2Q5SZI1 272 aa17.24■□□□□ 0.35
CLN6-224ENST00000638076 KCNIP4Q6PIL6 250 aa17.24■□□□□ 0.35
CLN6-224ENST00000638076 C19orf35Q6ZS72 473 aa17.24■□□□□ 0.35
CLN6-224ENST00000638076 THAP8Q8NA92 274 aa17.24■□□□□ 0.35
CLN6-224ENST00000638076 MISP3Q96FF7 219 aa17.24■□□□□ 0.35
CLN6-224ENST00000638076 PRORYQ9H606 182 aa17.24■□□□□ 0.35
CLN6-224ENST00000638076 TRAV5A0A0B4J249 113 aa17.23■□□□□ 0.35
CLN6-224ENST00000638076 MDFIC2A0A1B0GVS7 189 aa17.23■□□□□ 0.35
CLN6-224ENST00000638076 MFAP2P55001 183 aa17.23■□□□□ 0.35
CLN6-224ENST00000638076 OR4X1Q8NH49 305 aa17.23■□□□□ 0.35
CLN6-224ENST00000638076 FBXL15Q9H469 300 aa17.23■□□□□ 0.35
CLN6-224ENST00000638076 IFITM10A6NMD0 228 aa17.22■□□□□ 0.35
CLN6-224ENST00000638076 PPP1R2P9O14990 202 aa17.22■□□□□ 0.35
CLN6-224ENST00000638076 FAM3BP58499 235 aaPredicted RBP17.22■□□□□ 0.35
CLN6-224ENST00000638076 RUSC1-AS1Q66K80 236 aa17.22■□□□□ 0.35
CLN6-224ENST00000638076 RNF2Q99496 336 aa17.22■□□□□ 0.35
CLN6-224ENST00000638076 SSBP3Q9BWW4 388 aaPredicted RBP17.22■□□□□ 0.35
CLN6-224ENST00000638076 SLC25A2Q9BXI2 301 aa17.22■□□□□ 0.35
CLN6-224ENST00000638076 COX7A2P2O60397 106 aa17.22■□□□□ 0.35
CLN6-224ENST00000638076 SFTPCP11686 197 aa17.22■□□□□ 0.35
CLN6-224ENST00000638076 ETFRF1Q6IPR1 90 aa17.22■□□□□ 0.35
CLN6-224ENST00000638076 CHODLQ9H9P2 273 aa17.22■□□□□ 0.35
CLN6-224ENST00000638076 ZMAT5Q9UDW3 170 aaKnown RBP17.22■□□□□ 0.35
CLN6-224ENST00000638076 A0A1W2PPR1 153 aa17.21■□□□□ 0.35
CLN6-224ENST00000638076 PVRIGQ6DKI7 326 aa17.21■□□□□ 0.35
CLN6-224ENST00000638076 DTX2Q86UW9 622 aa17.21■□□□□ 0.35
CLN6-224ENST00000638076 FAM167A-AS1Q96KT0 104 aa17.21■□□□□ 0.35
CLN6-224ENST00000638076 PFDN5Q99471 154 aa17.21■□□□□ 0.35
CLN6-224ENST00000638076 CHD8Q9HCK8 2581 aa17.21■□□□□ 0.35
CLN6-224ENST00000638076 TIMM23O14925 209 aa17.21■□□□□ 0.35
CLN6-224ENST00000638076 CRYBB3P26998 211 aa17.21■□□□□ 0.35
CLN6-224ENST00000638076 GFI1BQ5VTD9 330 aa17.21■□□□□ 0.35
CLN6-224ENST00000638076 C10orf113Q5VZT2 155 aa17.21■□□□□ 0.35
CLN6-224ENST00000638076 PATE2Q6UY27 113 aa17.21■□□□□ 0.35
CLN6-224ENST00000638076 LOC105371242A0A075B767 164 aa17.2■□□□□ 0.34
CLN6-224ENST00000638076 CRYGCP07315 174 aa17.2■□□□□ 0.34
CLN6-224ENST00000638076 HTR1DP28221 377 aa17.2■□□□□ 0.34
CLN6-224ENST00000638076 SELENOTP62341 195 aa17.2■□□□□ 0.34
CLN6-224ENST00000638076 TPTE2P1Q5T6R2 138 aa17.2■□□□□ 0.34
CLN6-224ENST00000638076 OR5AU1Q8NGC0 362 aa17.2■□□□□ 0.34
CLN6-224ENST00000638076 OR1L4Q8NGR5 311 aa17.2■□□□□ 0.34
CLN6-224ENST00000638076 GGTLC3B5MD39 225 aa17.2■□□□□ 0.34
CLN6-224ENST00000638076 TEX22C9J3V5 150 aa17.2■□□□□ 0.34
CLN6-224ENST00000638076 C9JCJ5 164 aa17.2■□□□□ 0.34
CLN6-224ENST00000638076 K7EN84 100 aa17.2■□□□□ 0.34
CLN6-224ENST00000638076 FCN1O00602 326 aa17.2■□□□□ 0.34
CLN6-224ENST00000638076 TEX38Q6PEX7 206 aa17.2■□□□□ 0.34
CLN6-224ENST00000638076 UNQ6494/PRO21346Q6UXR6 183 aa17.2■□□□□ 0.34
CLN6-224ENST00000638076 OR11H6Q8NGC7 330 aa17.2■□□□□ 0.34
CLN6-224ENST00000638076 OR1P1Q8NH06 330 aa17.2■□□□□ 0.34
CLN6-224ENST00000638076 RNF5Q99942 180 aa17.2■□□□□ 0.34
CLN6-224ENST00000638076 ZNF355PQ9NSJ1 428 aa17.2■□□□□ 0.34
CLN6-224ENST00000638076 BPIFB3P59826 476 aa17.19■□□□□ 0.34
CLN6-224ENST00000638076 PLGLAQ15195 96 aa17.19■□□□□ 0.34
CLN6-224ENST00000638076 IMMP2LQ96T52 175 aa17.19■□□□□ 0.34
CLN6-224ENST00000638076 HILPDAQ9Y5L2 63 aa17.19■□□□□ 0.34
CLN6-224ENST00000638076 NCOR2Q9Y618 2525 aa17.19■□□□□ 0.34
CLN6-224ENST00000638076 ARHGAP32A7KAX9 2087 aa17.19■□□□□ 0.34
CLN6-224ENST00000638076 IGHV3-21A0A0B4J1V1 117 aa17.19■□□□□ 0.34
CLN6-224ENST00000638076 A0A1W2PRE2 83 aa17.19■□□□□ 0.34
CLN6-224ENST00000638076 HELTA6NFD8 242 aa17.19■□□□□ 0.34
CLN6-224ENST00000638076 MOSP00540 346 aa17.19■□□□□ 0.34
CLN6-224ENST00000638076 CDKN1AP38936 164 aa17.19■□□□□ 0.34
CLN6-224ENST00000638076 LGALS4P56470 323 aa17.19■□□□□ 0.34
CLN6-224ENST00000638076 SUMO1P63165 101 aaKnown RBP17.19■□□□□ 0.34
CLN6-224ENST00000638076 UBE2L3P68036 154 aaKnown RBP17.19■□□□□ 0.34
CLN6-224ENST00000638076 KLRD1Q13241 179 aa17.19■□□□□ 0.34
CLN6-224ENST00000638076 EAF1Q96JC9 268 aaPredicted RBP17.19■□□□□ 0.34
CLN6-224ENST00000638076 TNFRSF19Q9NS68 423 aa17.19■□□□□ 0.34
CLN6-224ENST00000638076 DPM3Q9P2X0 92 aa17.19■□□□□ 0.34
CLN6-224ENST00000638076 M0R1W7 72 aa17.18■□□□□ 0.34
CLN6-224ENST00000638076 TYMSP04818 313 aa17.18■□□□□ 0.34
CLN6-224ENST00000638076 LCN2P80188 198 aa17.18■□□□□ 0.34
CLN6-224ENST00000638076 PDZD11Q5EBL8 140 aa17.18■□□□□ 0.34
CLN6-224ENST00000638076 OR10G8Q8NGN5 311 aa17.18■□□□□ 0.34
CLN6-224ENST00000638076 SGMS2Q8NHU3 365 aa17.18■□□□□ 0.34
CLN6-224ENST00000638076 SRSF12Q8WXF0 261 aaKnown RBP17.18■□□□□ 0.34
CLN6-224ENST00000638076 GAR1Q9NY12 217 aaKnown RBP17.18■□□□□ 0.34
CLN6-224ENST00000638076 LY96Q9Y6Y9 160 aa17.18■□□□□ 0.34
CLN6-224ENST00000638076 ELOA3CA0A087WX78 387 aaPredicted RBP17.18■□□□□ 0.34
CLN6-224ENST00000638076 FOXL1Q12952 345 aa17.18■□□□□ 0.34
CLN6-224ENST00000638076 HIST3H2BBQ8N257 126 aa17.18■□□□□ 0.34
CLN6-224ENST00000638076 C22orf15Q8WYQ4 148 aa17.18■□□□□ 0.34
CLN6-224ENST00000638076 F11RQ9Y624 299 aaKnown RBP17.18■□□□□ 0.34
CLN6-224ENST00000638076 GPR61Q9BZJ8 451 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms