RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, human

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLN6-223	ENST00000637823	SRD5A1	P18405	259 aa		9.24	□□□□□ -0.93
CLN6-223	ENST00000637823	CLLU1	Q5K131	121 aa		9.24	□□□□□ -0.93
CLN6-223	ENST00000637823	FAM74A1	Q5RGS3	127 aa		9.24	□□□□□ -0.93
CLN6-223	ENST00000637823	TMEM116	Q8NCL8	245 aa		9.24	□□□□□ -0.93
CLN6-223	ENST00000637823	SAT2	Q96F10	170 aa	Predicted RBP	9.24	□□□□□ -0.93
CLN6-223	ENST00000637823	ACY3	Q96HD9	319 aa		9.24	□□□□□ -0.93
CLN6-223	ENST00000637823	NPCDR1	Q9BY65	106 aa		9.24	□□□□□ -0.93
CLN6-223	ENST00000637823	NPFFR1	Q9GZQ6	430 aa		9.24	□□□□□ -0.93
CLN6-223	ENST00000637823	PLA2G2E	Q9NZK7	142 aa		9.24	□□□□□ -0.93
CLN6-223	ENST00000637823	RFNG	Q9Y644	331 aa		9.24	□□□□□ -0.93
CLN6-223	ENST00000637823	HIVEP2	P31629	2446 aa		9.24	□□□□□ -0.93
CLN6-223	ENST00000637823		K7EIM0	57 aa		9.23	□□□□□ -0.93
CLN6-223	ENST00000637823	AGPAT2	O15120	278 aa		9.23	□□□□□ -0.93
CLN6-223	ENST00000637823	PRH1	P02810	166 aa		9.23	□□□□□ -0.93
CLN6-223	ENST00000637823	CAMLG	P49069	296 aa		9.23	□□□□□ -0.93
CLN6-223	ENST00000637823	BLOC1S1	P78537	153 aa		9.23	□□□□□ -0.93
CLN6-223	ENST00000637823	AKR1C8P	Q5T2L2	129 aa		9.23	□□□□□ -0.93
CLN6-223	ENST00000637823	DPPA3	Q6W0C5	159 aa		9.23	□□□□□ -0.93
CLN6-223	ENST00000637823	TMEM182	Q6ZP80	229 aa	Predicted RBP	9.23	□□□□□ -0.93
CLN6-223	ENST00000637823		Q6ZS46	218 aa		9.23	□□□□□ -0.93
CLN6-223	ENST00000637823	THAP8	Q8NA92	274 aa		9.23	□□□□□ -0.93
CLN6-223	ENST00000637823	NPIPB3	Q92617	1050 aa		9.23	□□□□□ -0.93
CLN6-223	ENST00000637823	MGST2	Q99735	147 aa		9.23	□□□□□ -0.93
CLN6-223	ENST00000637823	KCNIP2	Q9NS61	270 aa		9.23	□□□□□ -0.93
CLN6-223	ENST00000637823	TRBV9	A0A0B4J1U6	114 aa		9.22	□□□□□ -0.93
CLN6-223	ENST00000637823	ZNF705E	A8MWA4	302 aa	Predicted RBP	9.22	□□□□□ -0.93
CLN6-223	ENST00000637823	CLDN34	H7C241	214 aa		9.22	□□□□□ -0.93
CLN6-223	ENST00000637823	BRI3	O95415	125 aa		9.22	□□□□□ -0.93
CLN6-223	ENST00000637823	IGHV3-48	P01763	117 aa		9.22	□□□□□ -0.93
CLN6-223	ENST00000637823	MB	P02144	154 aa		9.22	□□□□□ -0.93
CLN6-223	ENST00000637823	NMB	P08949	121 aa		9.22	□□□□□ -0.93
CLN6-223	ENST00000637823	RPL29	P47914	159 aa	Known RBP	9.22	□□□□□ -0.93
CLN6-223	ENST00000637823	RND2	P52198	227 aa		9.22	□□□□□ -0.93
CLN6-223	ENST00000637823	NDUFA5	Q16718	116 aa		9.22	□□□□□ -0.93
CLN6-223	ENST00000637823	ACSM6	Q6P461	480 aa		9.22	□□□□□ -0.93
CLN6-223	ENST00000637823	OR4X1	Q8NH49	305 aa		9.22	□□□□□ -0.93
CLN6-223	ENST00000637823	VN1R17P	Q8TDU5	208 aa		9.22	□□□□□ -0.93
CLN6-223	ENST00000637823	ZNF418	Q8TF45	676 aa	Predicted RBP	9.22	□□□□□ -0.93
CLN6-223	ENST00000637823	GGTLC1	Q9BX51	225 aa		9.22	□□□□□ -0.93
CLN6-223	ENST00000637823	ZNF355P	Q9NSJ1	428 aa		9.22	□□□□□ -0.93
CLN6-223	ENST00000637823	MRPL36	Q9P0J6	103 aa	Known RBP	9.22	□□□□□ -0.93
CLN6-223	ENST00000637823	FBXL7	Q9UJT9	491 aa		9.22	□□□□□ -0.93
CLN6-223	ENST00000637823	SLC45A2	Q9UMX9	530 aa		9.22	□□□□□ -0.93
CLN6-223	ENST00000637823	HIVEP1	P15822	2718 aa		9.21	□□□□□ -0.93
CLN6-223	ENST00000637823	IGKV1OR2-108	A0A075B7D4	117 aa		9.21	□□□□□ -0.94
CLN6-223	ENST00000637823	IGHV3-21	A0A0B4J1V1	117 aa		9.21	□□□□□ -0.94
CLN6-223	ENST00000637823	DNAJC9-AS1	A6NH13	148 aa		9.21	□□□□□ -0.94
CLN6-223	ENST00000637823		H3BUA1	57 aa		9.21	□□□□□ -0.94
CLN6-223	ENST00000637823	NDUFB8	O95169	186 aa		9.21	□□□□□ -0.94
CLN6-223	ENST00000637823	PPIF	P30405	207 aa	Known RBP	9.21	□□□□□ -0.94
CLN6-223	ENST00000637823	OR10J1	P30954	320 aa		9.21	□□□□□ -0.94
CLN6-223	ENST00000637823	MFAP4	P55083	255 aa		9.21	□□□□□ -0.94
CLN6-223	ENST00000637823	FFAR4	Q5NUL3	377 aa		9.21	□□□□□ -0.94
CLN6-223	ENST00000637823		Q8N2B8	174 aa		9.21	□□□□□ -0.94
CLN6-223	ENST00000637823	NECAP1	Q8NC96	275 aa		9.21	□□□□□ -0.94
CLN6-223	ENST00000637823	NOL4L	Q96MY1	436 aa	Predicted RBP	9.21	□□□□□ -0.94
CLN6-223	ENST00000637823	TRGV9	Q99603	122 aa		9.21	□□□□□ -0.94
CLN6-223	ENST00000637823	TXN2	Q99757	166 aa		9.21	□□□□□ -0.94
CLN6-223	ENST00000637823	LINC00527	Q9UJ94	153 aa		9.21	□□□□□ -0.94
CLN6-223	ENST00000637823	SVEP1	Q4LDE5	3571 aa		9.21	□□□□□ -0.94
CLN6-223	ENST00000637823	TRAV30	A0A087WSZ9	112 aa		9.2	□□□□□ -0.94
CLN6-223	ENST00000637823	TCRBV4S1A1T	A0A5B7	111 aa		9.2	□□□□□ -0.94
CLN6-223	ENST00000637823	ZFP92	A6NM28	416 aa		9.2	□□□□□ -0.94
CLN6-223	ENST00000637823	CLN5	O75503	358 aa		9.2	□□□□□ -0.94
CLN6-223	ENST00000637823	OR2J3	O76001	311 aa		9.2	□□□□□ -0.94
CLN6-223	ENST00000637823	TSPAN15	O95858	294 aa		9.2	□□□□□ -0.94
CLN6-223	ENST00000637823	LINC00869	P0C866	280 aa		9.2	□□□□□ -0.94
CLN6-223	ENST00000637823	NPBWR1	P48145	328 aa		9.2	□□□□□ -0.94
CLN6-223	ENST00000637823	RPL15	P61313	204 aa	Known RBP	9.2	□□□□□ -0.94
CLN6-223	ENST00000637823	SELENOT	P62341	195 aa		9.2	□□□□□ -0.94
CLN6-223	ENST00000637823	RHOG	P84095	191 aa		9.2	□□□□□ -0.94
CLN6-223	ENST00000637823	ACOT6	Q3I5F7	207 aa	Predicted RBP	9.2	□□□□□ -0.94
CLN6-223	ENST00000637823	TMEM41B	Q5BJD5	291 aa		9.2	□□□□□ -0.94
CLN6-223	ENST00000637823	MIC13	Q5XKP0	118 aa		9.2	□□□□□ -0.94
CLN6-223	ENST00000637823	CYP2G1P	Q6ZSU1	146 aa		9.2	□□□□□ -0.94
CLN6-223	ENST00000637823	FAM213B	Q8TBF2	198 aa		9.2	□□□□□ -0.94
CLN6-223	ENST00000637823	PCNP	Q8WW12	178 aa	Known RBP	9.2	□□□□□ -0.94
CLN6-223	ENST00000637823	CXorf58	Q96LI9	332 aa		9.2	□□□□□ -0.94
CLN6-223	ENST00000637823	DUX5	Q96PT3	197 aa		9.2	□□□□□ -0.94
CLN6-223	ENST00000637823	GSX1	Q9H4S2	264 aa	Predicted RBP	9.2	□□□□□ -0.94
CLN6-223	ENST00000637823	ZNF702P	Q9H963	129 aa		9.2	□□□□□ -0.94
CLN6-223	ENST00000637823	RPRM	Q9NS64	109 aa		9.2	□□□□□ -0.94
CLN6-223	ENST00000637823	PXMP4	Q9Y6I8	212 aa		9.2	□□□□□ -0.94
CLN6-223	ENST00000637823	IGKV1D-37	A0A075B6S9	117 aa		9.19	□□□□□ -0.94
CLN6-223	ENST00000637823	TMEM89	A2RUT3	159 aa		9.19	□□□□□ -0.94
CLN6-223	ENST00000637823	LINC00862	A6NCI5	91 aa		9.19	□□□□□ -0.94
CLN6-223	ENST00000637823	FAM223B	A6NKX1	122 aa		9.19	□□□□□ -0.94
CLN6-223	ENST00000637823	IGLV1-40	P01703	118 aa		9.19	□□□□□ -0.94
CLN6-223	ENST00000637823	FABP1	P07148	127 aa		9.19	□□□□□ -0.94
CLN6-223	ENST00000637823	M6PR	P20645	277 aa		9.19	□□□□□ -0.94
CLN6-223	ENST00000637823	FCGR2B	P31994	310 aa	Predicted RBP	9.19	□□□□□ -0.94
CLN6-223	ENST00000637823	ELL	P55199	621 aa	Predicted RBP	9.19	□□□□□ -0.94
CLN6-223	ENST00000637823	B2M	P61769	119 aa		9.19	□□□□□ -0.94
CLN6-223	ENST00000637823	PRR20E	P86478	221 aa		9.19	□□□□□ -0.94
CLN6-223	ENST00000637823	PRR20C	P86479	221 aa		9.19	□□□□□ -0.94
CLN6-223	ENST00000637823	PRR20D	P86480	221 aa		9.19	□□□□□ -0.94
CLN6-223	ENST00000637823	PRR20B	P86481	221 aa		9.19	□□□□□ -0.94
CLN6-223	ENST00000637823	PRR20A	P86496	221 aa		9.19	□□□□□ -0.94
CLN6-223	ENST00000637823	CFHR3	Q02985	330 aa		9.19	□□□□□ -0.94
CLN6-223	ENST00000637823	ATP5G2	Q06055	141 aa		9.19	□□□□□ -0.94

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