RNA–Protein interactions for RNA: ENST00000636602.1

CLN5-212, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 3

Gene CLN5, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-212ENST00000636602 C20orf196Q8IYI0 205 aa2.04□□□□□ -2.08
CLN5-212ENST00000636602 LRRC25Q8N386 305 aaPredicted RBP2.04□□□□□ -2.08
CLN5-212ENST00000636602 ZNF471Q9BX82 626 aaPredicted RBP2.04□□□□□ -2.08
CLN5-212ENST00000636602 PAPPA2Q9BXP8 1791 aa2.04□□□□□ -2.08
CLN5-212ENST00000636602 ULBP3Q9BZM4 244 aa2.04□□□□□ -2.08
CLN5-212ENST00000636602 PAQR5Q9NXK6 330 aaPredicted RBP2.04□□□□□ -2.08
CLN5-212ENST00000636602 ZNF337Q9Y3M9 751 aa2.04□□□□□ -2.08
CLN5-212ENST00000636602 MYH4Q9Y623 1939 aa2.03□□□□□ -2.08
CLN5-212ENST00000636602 KNCNA6PVL3 124 aa2.03□□□□□ -2.08
CLN5-212ENST00000636602 C2orf74A8MZ97 194 aa2.03□□□□□ -2.08
CLN5-212ENST00000636602 BHLHE40O14503 412 aa2.03□□□□□ -2.08
CLN5-212ENST00000636602 NSA2O95478 260 aaKnown RBP2.03□□□□□ -2.08
CLN5-212ENST00000636602 IFNA6P05013 189 aa2.03□□□□□ -2.08
CLN5-212ENST00000636602 CA5AP35218 305 aa2.03□□□□□ -2.08
CLN5-212ENST00000636602 FUSP35637 526 aaKnown RBP eCLIP2.03□□□□□ -2.08
CLN5-212ENST00000636602 HINT1P49773 126 aaPredicted RBP2.03□□□□□ -2.08
CLN5-212ENST00000636602 AKR1C1Q04828 323 aa2.03□□□□□ -2.08
CLN5-212ENST00000636602 MIAQ16674 131 aa2.03□□□□□ -2.08
CLN5-212ENST00000636602 GUK1Q16774 197 aa2.03□□□□□ -2.08
CLN5-212ENST00000636602 ZNF767PQ75MW2 155 aa2.03□□□□□ -2.08
CLN5-212ENST00000636602 LHFPL1Q86WI0 220 aa2.03□□□□□ -2.08
CLN5-212ENST00000636602 MRPS24Q96EL2 167 aaKnown RBP2.03□□□□□ -2.08
CLN5-212ENST00000636602 BOLA2Q9H3K6 86 aa2.03□□□□□ -2.08
CLN5-212ENST00000636602 FAM215AQ9Y5M1 114 aa2.03□□□□□ -2.08
CLN5-212ENST00000636602 PTPRFP10586 1907 aa2.03□□□□□ -2.08
CLN5-212ENST00000636602 PHIPQ8WWQ0 1821 aa2.03□□□□□ -2.09
CLN5-212ENST00000636602 ZNF532Q9HCE3 1301 aa2.02□□□□□ -2.09
CLN5-212ENST00000636602 TRBV20OR9-2A0A075B6H5 130 aa2.02□□□□□ -2.09
CLN5-212ENST00000636602 TRGV5A0A0B4J1U4 118 aa2.02□□□□□ -2.09
CLN5-212ENST00000636602 TRGV4A0A0C4DH28 118 aa2.02□□□□□ -2.09
CLN5-212ENST00000636602 MUC21A0A0G2JKD1 596 aa2.02□□□□□ -2.09
CLN5-212ENST00000636602 MUC21A0A140T8X8 626 aa2.02□□□□□ -2.09
CLN5-212ENST00000636602 SMIM9A6NGZ8 99 aa2.02□□□□□ -2.09
CLN5-212ENST00000636602 SRP19P09132 144 aaKnown RBP2.02□□□□□ -2.09
CLN5-212ENST00000636602 CSRP1P21291 193 aaKnown RBP2.02□□□□□ -2.09
CLN5-212ENST00000636602 SPA17Q15506 151 aa2.02□□□□□ -2.09
CLN5-212ENST00000636602 SLC35E3Q7Z769 313 aa2.02□□□□□ -2.09
CLN5-212ENST00000636602 OR4X2Q8NGF9 303 aa2.02□□□□□ -2.09
CLN5-212ENST00000636602 OR5J2Q8NH18 312 aa2.02□□□□□ -2.09
CLN5-212ENST00000636602 NDUFB11Q9NX14 153 aa2.02□□□□□ -2.09
CLN5-212ENST00000636602 PARP14Q460N5 1801 aa2.02□□□□□ -2.09
CLN5-212ENST00000636602 LOC285556D6RIA3 1793 aa2.02□□□□□ -2.09
CLN5-212ENST00000636602 MYH6P13533 1939 aa2.01□□□□□ -2.09
CLN5-212ENST00000636602 ROBO3Q96MS0 1386 aa2.01□□□□□ -2.09
CLN5-212ENST00000636602 RBBP6Q7Z6E9 1792 aaKnown RBP2.01□□□□□ -2.09
CLN5-212ENST00000636602 CCDC171Q6TFL3 1326 aa2.01□□□□□ -2.09
CLN5-212ENST00000636602 A0A087WUJ7 227 aa2.01□□□□□ -2.09
CLN5-212ENST00000636602 A0A0J9YW62 118 aa2.01□□□□□ -2.09
CLN5-212ENST00000636602 A0A0J9YY10 115 aa2.01□□□□□ -2.09
CLN5-212ENST00000636602 A0A1B0GX78 115 aa2.01□□□□□ -2.09
CLN5-212ENST00000636602 PQLC2LA1A4F0 135 aa2.01□□□□□ -2.09
CLN5-212ENST00000636602 TFPTP0C1Z6 253 aa2.01□□□□□ -2.09
CLN5-212ENST00000636602 HIST1H1TP22492 207 aaPredicted RBP2.01□□□□□ -2.09
CLN5-212ENST00000636602 CTAG1AP78358 180 aa2.01□□□□□ -2.09
CLN5-212ENST00000636602 BASP1P80723 227 aaKnown RBP2.01□□□□□ -2.09
CLN5-212ENST00000636602 MRPS25P82663 173 aaKnown RBP2.01□□□□□ -2.09
CLN5-212ENST00000636602 EDDM3AQ14507 147 aa2.01□□□□□ -2.09
CLN5-212ENST00000636602 SS18Q15532 418 aa2.01□□□□□ -2.09
CLN5-212ENST00000636602 ALX1Q15699 326 aa2.01□□□□□ -2.09
CLN5-212ENST00000636602 ZNF283Q8N7M2 679 aa2.01□□□□□ -2.09
CLN5-212ENST00000636602 OR51T1Q8NGJ9 327 aa2.01□□□□□ -2.09
CLN5-212ENST00000636602 DNAJC30Q96LL9 226 aa2.01□□□□□ -2.09
CLN5-212ENST00000636602 PRAP1Q96NZ9 151 aa2.01□□□□□ -2.09
CLN5-212ENST00000636602 PSTPIP2Q9H939 334 aa2.01□□□□□ -2.09
CLN5-212ENST00000636602 GLTPQ9NZD2 209 aa2.01□□□□□ -2.09
CLN5-212ENST00000636602 MRPL27Q9P0M9 148 aaKnown RBP2.01□□□□□ -2.09
CLN5-212ENST00000636602 RBM7Q9Y580 266 aaKnown RBP2.01□□□□□ -2.09
CLN5-212ENST00000636602 PCNTO95613 3336 aa2.01□□□□□ -2.09
CLN5-212ENST00000636602 SSC5DA1L4H1 1573 aa2.01□□□□□ -2.09
CLN5-212ENST00000636602 MGAMO43451 1857 aa2.01□□□□□ -2.09
CLN5-212ENST00000636602 COL11A1P12107 1806 aaPredicted RBP2.01□□□□□ -2.09
CLN5-212ENST00000636602 A0A0G2JMZ2 1700 aa2□□□□□ -2.09
CLN5-212ENST00000636602 A0A0D9SFI3 127 aa2□□□□□ -2.09
CLN5-212ENST00000636602 OR4C46A6NHA9 309 aa2□□□□□ -2.09
CLN5-212ENST00000636602 ZNF878C9JN71 531 aa2□□□□□ -2.09
CLN5-212ENST00000636602 H3BT86 120 aa2□□□□□ -2.09
CLN5-212ENST00000636602 LEPROTO15243 131 aa2□□□□□ -2.09
CLN5-212ENST00000636602 KLRC4O43908 158 aa2□□□□□ -2.09
CLN5-212ENST00000636602 HLA-DRB1P01911 266 aa2□□□□□ -2.09
CLN5-212ENST00000636602 HOXA6P31267 233 aa2□□□□□ -2.09
CLN5-212ENST00000636602 ERVS71-1P61550 626 aa2□□□□□ -2.09
CLN5-212ENST00000636602 SNRPD2P62316 118 aaKnown RBP2□□□□□ -2.09
CLN5-212ENST00000636602 KCNJ8Q15842 424 aa2□□□□□ -2.09
CLN5-212ENST00000636602 AKIRIN2Q53H80 203 aa2□□□□□ -2.09
CLN5-212ENST00000636602 PABPC1L2AQ5JQF8 200 aa2□□□□□ -2.09
CLN5-212ENST00000636602 ANKRD29Q8N6D5 301 aa2□□□□□ -2.09
CLN5-212ENST00000636602 OR5B17Q8NGF7 314 aa2□□□□□ -2.09
CLN5-212ENST00000636602 ACOT12Q8WYK0 555 aa2□□□□□ -2.09
CLN5-212ENST00000636602 DGCR14Q96DF8 476 aaKnown RBP2□□□□□ -2.09
CLN5-212ENST00000636602 ERMAPQ96PL5 475 aaPredicted RBP2□□□□□ -2.09
CLN5-212ENST00000636602 IMMP2LQ96T52 175 aa2□□□□□ -2.09
CLN5-212ENST00000636602 Q9BRP9 147 aa2□□□□□ -2.09
CLN5-212ENST00000636602 COMMD5Q9GZQ3 224 aa2□□□□□ -2.09
CLN5-212ENST00000636602 WDR61Q9GZS3 305 aaKnown RBP2□□□□□ -2.09
CLN5-212ENST00000636602 DCSTAMPQ9H295 470 aa2□□□□□ -2.09
CLN5-212ENST00000636602 XAGE1AQ9HD64 81 aa2□□□□□ -2.09
CLN5-212ENST00000636602 PRTFDC1Q9NRG1 225 aa2□□□□□ -2.09
CLN5-212ENST00000636602 CISHQ9NSE2 258 aa2□□□□□ -2.09
CLN5-212ENST00000636602 RSL24D1Q9UHA3 163 aaKnown RBP2□□□□□ -2.09
CLN5-212ENST00000636602 HHLA3Q9XRX5 114 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms