RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 A0A0B4J293 547 aa9.23□□□□□ -0.93
LINC00339-206ENST00000634451 A0A0G2JRQ6 117 aa9.23□□□□□ -0.93
LINC00339-206ENST00000634451 AMBPP02760 352 aa9.23□□□□□ -0.93
LINC00339-206ENST00000634451 RNASE2P10153 161 aaKnown RBP9.23□□□□□ -0.93
LINC00339-206ENST00000634451 NEDD8Q15843 81 aa9.23□□□□□ -0.93
LINC00339-206ENST00000634451 TIGITQ495A1 244 aa9.23□□□□□ -0.93
LINC00339-206ENST00000634451 TMEM69Q5SWH9 247 aa9.23□□□□□ -0.93
LINC00339-206ENST00000634451 CMTM1Q8IZ96 169 aa9.23□□□□□ -0.93
LINC00339-206ENST00000634451 DUSP18Q8NEJ0 188 aa9.23□□□□□ -0.93
LINC00339-206ENST00000634451 TSC22D3Q99576 134 aa9.23□□□□□ -0.93
LINC00339-206ENST00000634451 PLA2G2EQ9NZK7 142 aa9.23□□□□□ -0.93
LINC00339-206ENST00000634451 IGKV1-17P01599 117 aa9.22□□□□□ -0.93
LINC00339-206ENST00000634451 P0C879 139 aa9.22□□□□□ -0.93
LINC00339-206ENST00000634451 ETV6P41212 452 aa9.22□□□□□ -0.93
LINC00339-206ENST00000634451 PSMG4Q5JS54 123 aa9.22□□□□□ -0.93
LINC00339-206ENST00000634451 SAMD12Q8N8I0 201 aa9.22□□□□□ -0.93
LINC00339-206ENST00000634451 OR6F1Q8NGZ6 308 aa9.22□□□□□ -0.93
LINC00339-206ENST00000634451 FCGR1BQ92637 280 aa9.22□□□□□ -0.93
LINC00339-206ENST00000634451 XCL2Q9UBD3 114 aa9.22□□□□□ -0.93
LINC00339-206ENST00000634451 RAB26Q9ULW5 256 aa9.22□□□□□ -0.93
LINC00339-206ENST00000634451 LRP1BQ9NZR2 4599 aa9.21□□□□□ -0.93
LINC00339-206ENST00000634451 M0QYG6 137 aa9.21□□□□□ -0.94
LINC00339-206ENST00000634451 SPP1P10451 314 aa9.21□□□□□ -0.94
LINC00339-206ENST00000634451 NPPCP23582 126 aa9.21□□□□□ -0.94
LINC00339-206ENST00000634451 CRYBB3P26998 211 aa9.21□□□□□ -0.94
LINC00339-206ENST00000634451 RPS19P39019 145 aaKnown RBP9.21□□□□□ -0.94
LINC00339-206ENST00000634451 NPBWR1P48145 328 aa9.21□□□□□ -0.94
LINC00339-206ENST00000634451 FXYD7P58549 80 aa9.21□□□□□ -0.94
LINC00339-206ENST00000634451 TAS2R46P59540 309 aa9.21□□□□□ -0.94
LINC00339-206ENST00000634451 LSM3P62310 102 aaKnown RBP9.21□□□□□ -0.94
LINC00339-206ENST00000634451 ERHP84090 104 aaKnown RBP9.21□□□□□ -0.94
LINC00339-206ENST00000634451 RNASE12Q5GAN4 147 aaKnown RBP9.21□□□□□ -0.94
LINC00339-206ENST00000634451 UBE2NLQ5JXB2 153 aa9.21□□□□□ -0.94
LINC00339-206ENST00000634451 BORCS5Q969J3 196 aa9.21□□□□□ -0.94
LINC00339-206ENST00000634451 RAB40CQ96S21 281 aa9.21□□□□□ -0.94
LINC00339-206ENST00000634451 TP53RKQ96S44 253 aa9.21□□□□□ -0.94
LINC00339-206ENST00000634451 CLN5O75503 358 aa9.2□□□□□ -0.94
LINC00339-206ENST00000634451 EMP1P54849 157 aa9.2□□□□□ -0.94
LINC00339-206ENST00000634451 DHRS2Q13268 280 aa9.2□□□□□ -0.94
LINC00339-206ENST00000634451 GDF5OSQ5U4N7 250 aa9.2□□□□□ -0.94
LINC00339-206ENST00000634451 MORN3Q6PF18 240 aaPredicted RBP9.2□□□□□ -0.94
LINC00339-206ENST00000634451 SLC35G3Q8N808 338 aa9.2□□□□□ -0.94
LINC00339-206ENST00000634451 GPX8Q8TED1 209 aa9.2□□□□□ -0.94
LINC00339-206ENST00000634451 GLMPQ8WWB7 406 aa9.2□□□□□ -0.94
LINC00339-206ENST00000634451 S100A16Q96FQ6 103 aaKnown RBP9.2□□□□□ -0.94
LINC00339-206ENST00000634451 GRAMD2BQ96HH9 432 aa9.2□□□□□ -0.94
LINC00339-206ENST00000634451 METTL26Q96S19 204 aa9.2□□□□□ -0.94
LINC00339-206ENST00000634451 U3KQE9 123 aa9.2□□□□□ -0.94
LINC00339-206ENST00000634451 CD5P06127 495 aa9.19□□□□□ -0.94
LINC00339-206ENST00000634451 PRSS3P35030 304 aa9.19□□□□□ -0.94
LINC00339-206ENST00000634451 OPRK1P41145 380 aa9.19□□□□□ -0.94
LINC00339-206ENST00000634451 TSPAN5P62079 268 aa9.19□□□□□ -0.94
LINC00339-206ENST00000634451 SP6Q3SY56 376 aa9.19□□□□□ -0.94
LINC00339-206ENST00000634451 Q6ZR54 194 aa9.19□□□□□ -0.94
LINC00339-206ENST00000634451 Q6ZRM9 215 aa9.19□□□□□ -0.94
LINC00339-206ENST00000634451 SNX29P2Q8IUI4 249 aa9.19□□□□□ -0.94
LINC00339-206ENST00000634451 NDUFAF3Q9BU61 184 aa9.19□□□□□ -0.94
LINC00339-206ENST00000634451 VCX3BQ9H321 246 aa9.19□□□□□ -0.94
LINC00339-206ENST00000634451 HELTA6NFD8 242 aa9.18□□□□□ -0.94
LINC00339-206ENST00000634451 IFNA17P01571 189 aa9.18□□□□□ -0.94
LINC00339-206ENST00000634451 IGKV3-20P01619 116 aa9.18□□□□□ -0.94
LINC00339-206ENST00000634451 P0DMU3 169 aa9.18□□□□□ -0.94
LINC00339-206ENST00000634451 FAM231AP0DMU4 169 aa9.18□□□□□ -0.94
LINC00339-206ENST00000634451 FAM231CP0DMU5 169 aa9.18□□□□□ -0.94
LINC00339-206ENST00000634451 SNCAP37840 140 aa9.18□□□□□ -0.94
LINC00339-206ENST00000634451 HOXA1P49639 335 aaPredicted RBP9.18□□□□□ -0.94
LINC00339-206ENST00000634451 USF2Q15853 346 aaPredicted RBP9.18□□□□□ -0.94
LINC00339-206ENST00000634451 OR4X1Q8NH49 305 aa9.18□□□□□ -0.94
LINC00339-206ENST00000634451 TMEM170AQ8WVE7 144 aa9.18□□□□□ -0.94
LINC00339-206ENST00000634451 TMEM230Q96A57 120 aa9.18□□□□□ -0.94
LINC00339-206ENST00000634451 TMEM231Q9H6L2 316 aa9.18□□□□□ -0.94
LINC00339-206ENST00000634451 IGHV3OR16-12A0A075B7B8 117 aa9.17□□□□□ -0.94
LINC00339-206ENST00000634451 A0A1W2PS18 150 aa9.17□□□□□ -0.94
LINC00339-206ENST00000634451 FAM90A26D6RGX4 464 aa9.17□□□□□ -0.94
LINC00339-206ENST00000634451 H3BMM0 161 aa9.17□□□□□ -0.94
LINC00339-206ENST00000634451 NXPH3O95157 252 aa9.17□□□□□ -0.94
LINC00339-206ENST00000634451 CD74P04233 296 aa9.17□□□□□ -0.94
LINC00339-206ENST00000634451 IGLC1P0CG04 106 aa9.17□□□□□ -0.94
LINC00339-206ENST00000634451 AKR1C2P52895 323 aa9.17□□□□□ -0.94
LINC00339-206ENST00000634451 LGALS9BQ3B8N2 356 aa9.17□□□□□ -0.94
LINC00339-206ENST00000634451 TMEM41BQ5BJD5 291 aa9.17□□□□□ -0.94
LINC00339-206ENST00000634451 C16orf54Q6UWD8 224 aa9.17□□□□□ -0.94
LINC00339-206ENST00000634451 FAM212BQ9NTI7 297 aaPredicted RBP9.17□□□□□ -0.94
LINC00339-206ENST00000634451 INS-IGF2F8WCM5 200 aa9.16□□□□□ -0.94
LINC00339-206ENST00000634451 PGAM2P15259 253 aa9.16□□□□□ -0.94
LINC00339-206ENST00000634451 HTN3P15516 51 aa9.16□□□□□ -0.94
LINC00339-206ENST00000634451 RND2P52198 227 aa9.16□□□□□ -0.94
LINC00339-206ENST00000634451 UCP3P55916 312 aa9.16□□□□□ -0.94
LINC00339-206ENST00000634451 PIGPP57054 158 aa9.16□□□□□ -0.94
LINC00339-206ENST00000634451 DHODHQ02127 395 aa9.16□□□□□ -0.94
LINC00339-206ENST00000634451 BSXQ3C1V8 233 aa9.16□□□□□ -0.94
LINC00339-206ENST00000634451 PRSS54Q6PEW0 395 aa9.16□□□□□ -0.94
LINC00339-206ENST00000634451 ZNF705AQ6ZN79 300 aaPredicted RBP9.16□□□□□ -0.94
LINC00339-206ENST00000634451 OR4D10Q8NGI6 311 aa9.16□□□□□ -0.94
LINC00339-206ENST00000634451 APOBP04114 4563 aaKnown RBP9.15□□□□□ -0.94
LINC00339-206ENST00000634451 IFNA10P01566 189 aa9.15□□□□□ -0.94
LINC00339-206ENST00000634451 UBE2DNLQ8IWF7 75 aa9.15□□□□□ -0.94
LINC00339-206ENST00000634451 LHFPL5Q8TAF8 219 aa9.15□□□□□ -0.94
LINC00339-206ENST00000634451 COMMD3Q9UBI1 195 aa9.15□□□□□ -0.94
LINC00339-206ENST00000634451 ZNF705FA8MVS1 300 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms