RNA–Protein interactions for RNA: ENST00000630424.2

UBE3A-220, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 5,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-220ENST00000630424 PTPN13Q12923 2485 aa11.75□□□□□ -0.53
UBE3A-220ENST00000630424 Q0VFX4 171 aa11.75□□□□□ -0.53
UBE3A-220ENST00000630424 LBHQ53QV2 105 aaPredicted RBP11.75□□□□□ -0.53
UBE3A-220ENST00000630424 SP5Q6BEB4 398 aaPredicted RBP11.75□□□□□ -0.53
UBE3A-220ENST00000630424 ZNF497Q6ZNH5 498 aa11.75□□□□□ -0.53
UBE3A-220ENST00000630424 VMO1Q7Z5L0 202 aa11.75□□□□□ -0.53
UBE3A-220ENST00000630424 LYZL4Q96KX0 146 aa11.75□□□□□ -0.53
UBE3A-220ENST00000630424 MALP21145 153 aa11.75□□□□□ -0.53
UBE3A-220ENST00000630424 PSMG4Q5JS54 123 aa11.75□□□□□ -0.53
UBE3A-220ENST00000630424 SCGB3A1Q96QR1 104 aa11.75□□□□□ -0.53
UBE3A-220ENST00000630424 RPUSD1Q9UJJ7 312 aaKnown RBP11.75□□□□□ -0.53
UBE3A-220ENST00000630424 SLC17A3O00476 420 aa11.75□□□□□ -0.53
UBE3A-220ENST00000630424 SMIM6P0DI80 62 aa11.75□□□□□ -0.53
UBE3A-220ENST00000630424 SPATA45Q537H7 98 aa11.75□□□□□ -0.53
UBE3A-220ENST00000630424 FAM209BQ5JX69 171 aa11.75□□□□□ -0.53
UBE3A-220ENST00000630424 FREM3P0C091 2139 aa11.75□□□□□ -0.53
UBE3A-220ENST00000630424 C15orf61A6NNL5 157 aa11.75□□□□□ -0.53
UBE3A-220ENST00000630424 FABP5P3A8MUU1 101 aa11.75□□□□□ -0.53
UBE3A-220ENST00000630424 OR1P1Q8NH06 330 aa11.75□□□□□ -0.53
UBE3A-220ENST00000630424 IGHV2-26A0A0B4J1V2 119 aa11.74□□□□□ -0.53
UBE3A-220ENST00000630424 ZNF415Q09FC8 603 aa11.74□□□□□ -0.53
UBE3A-220ENST00000630424 SLC25A34Q6PIV7 304 aa11.74□□□□□ -0.53
UBE3A-220ENST00000630424 KIR3DL3Q8N743 410 aa11.74□□□□□ -0.53
UBE3A-220ENST00000630424 TNFRSF14Q92956 283 aa11.74□□□□□ -0.53
UBE3A-220ENST00000630424 KIAA2026Q5HYC2 2103 aa11.74□□□□□ -0.53
UBE3A-220ENST00000630424 SCO2A0A1W2PP80 73 aa11.74□□□□□ -0.53
UBE3A-220ENST00000630424 ATOH7Q8N100 152 aa11.74□□□□□ -0.53
UBE3A-220ENST00000630424 PAQR4Q8N4S7 273 aaPredicted RBP11.74□□□□□ -0.53
UBE3A-220ENST00000630424 ZNF414Q96IQ9 312 aa11.74□□□□□ -0.53
UBE3A-220ENST00000630424 SLC25A15Q9Y619 301 aa11.74□□□□□ -0.53
UBE3A-220ENST00000630424 IGKV3D-20A0A0C4DH25 116 aa11.74□□□□□ -0.53
UBE3A-220ENST00000630424 FABP2P12104 132 aa11.74□□□□□ -0.53
UBE3A-220ENST00000630424 C10orf55Q5SWW7 151 aa11.74□□□□□ -0.53
UBE3A-220ENST00000630424 H3BRM9 83 aa11.73□□□□□ -0.53
UBE3A-220ENST00000630424 RAMP3O60896 148 aa11.73□□□□□ -0.53
UBE3A-220ENST00000630424 LINC00271P0C7V0 271 aa11.73□□□□□ -0.53
UBE3A-220ENST00000630424 JOSD1Q15040 202 aaPredicted RBP11.73□□□□□ -0.53
UBE3A-220ENST00000630424 RTBDNQ9BSG5 229 aaPredicted RBP11.73□□□□□ -0.53
UBE3A-220ENST00000630424 TMEM178BH3BS89 294 aa11.73□□□□□ -0.53
UBE3A-220ENST00000630424 CRPP02741 224 aa11.73□□□□□ -0.53
UBE3A-220ENST00000630424 ATP5G3P48201 142 aa11.73□□□□□ -0.53
UBE3A-220ENST00000630424 C12orf54Q6X4T0 127 aa11.73□□□□□ -0.53
UBE3A-220ENST00000630424 VGLL1Q99990 258 aa11.73□□□□□ -0.53
UBE3A-220ENST00000630424 BPESC1Q9GZL8 116 aa11.73□□□□□ -0.53
UBE3A-220ENST00000630424 CRIM1Q9NZV1 1036 aa11.73□□□□□ -0.53
UBE3A-220ENST00000630424 PLXNA1Q9UIW2 1896 aa11.73□□□□□ -0.53
UBE3A-220ENST00000630424 SRSF7Q16629 238 aaKnown RBP eCLIP11.73□□□□□ -0.534e-11■■■■□ 19.7
UBE3A-220ENST00000630424 C15orf32Q32M92 178 aa11.73□□□□□ -0.53
UBE3A-220ENST00000630424 ZNF329Q86UD4 541 aa11.73□□□□□ -0.53
UBE3A-220ENST00000630424 LRTM2Q8N967 370 aa11.73□□□□□ -0.53
UBE3A-220ENST00000630424 DUTP33316 252 aaKnown RBP11.73□□□□□ -0.53
UBE3A-220ENST00000630424 CDX1P47902 265 aaPredicted RBP11.73□□□□□ -0.53
UBE3A-220ENST00000630424 TMEM42Q69YG0 159 aa11.73□□□□□ -0.53
UBE3A-220ENST00000630424 HEPN1Q6WQI6 88 aa11.73□□□□□ -0.53
UBE3A-220ENST00000630424 MDS2Q8NDY4 140 aa11.73□□□□□ -0.53
UBE3A-220ENST00000630424 ASCL2Q99929 193 aa11.73□□□□□ -0.53
UBE3A-220ENST00000630424 CHCHD5Q9BSY4 110 aa11.73□□□□□ -0.53
UBE3A-220ENST00000630424 TAF1LQ8IZX4 1826 aa11.72□□□□□ -0.53
UBE3A-220ENST00000630424 RNF223E7ERA6 249 aa11.72□□□□□ -0.53
UBE3A-220ENST00000630424 MLNRO43193 412 aa11.72□□□□□ -0.53
UBE3A-220ENST00000630424 LEPP41159 167 aa11.72□□□□□ -0.53
UBE3A-220ENST00000630424 ERVK11-1P61568 191 aa11.72□□□□□ -0.53
UBE3A-220ENST00000630424 FMC1Q96HJ9 113 aa11.72□□□□□ -0.53
UBE3A-220ENST00000630424 CSPG4Q6UVK1 2322 aa11.72□□□□□ -0.53
UBE3A-220ENST00000630424 BRCA1P38398 1863 aaKnown RBP11.72□□□□□ -0.53
UBE3A-220ENST00000630424 MPTX1A8MV57 137 aa11.72□□□□□ -0.53
UBE3A-220ENST00000630424 IGHV1-8P0DP01 117 aa11.72□□□□□ -0.53
UBE3A-220ENST00000630424 IGFBP3P17936 291 aaPredicted RBP11.72□□□□□ -0.53
UBE3A-220ENST00000630424 PKIAP61925 76 aa11.72□□□□□ -0.53
UBE3A-220ENST00000630424 TMEM50AO95807 157 aa11.72□□□□□ -0.53
UBE3A-220ENST00000630424 PRR30Q53SZ7 412 aaPredicted RBP11.72□□□□□ -0.53
UBE3A-220ENST00000630424 RPP21Q9H633 154 aaKnown RBP11.71□□□□□ -0.53
UBE3A-220ENST00000630424 A0A087WX48 190 aa11.71□□□□□ -0.53
UBE3A-220ENST00000630424 GAGE10A6NGK3 116 aa11.71□□□□□ -0.53
UBE3A-220ENST00000630424 VENTXO95231 258 aa11.71□□□□□ -0.53
UBE3A-220ENST00000630424 APOHP02749 345 aaPredicted RBP11.71□□□□□ -0.53
UBE3A-220ENST00000630424 SLC25A16P16260 332 aa11.71□□□□□ -0.53
UBE3A-220ENST00000630424 GNG5P63218 68 aa11.71□□□□□ -0.53
UBE3A-220ENST00000630424 DOPEY1Q5JWR5 2465 aa11.71□□□□□ -0.53
UBE3A-220ENST00000630424 A0A087WV48 116 aa11.71□□□□□ -0.53
UBE3A-220ENST00000630424 TRBV9A0A0B4J1U6 114 aa11.71□□□□□ -0.53
UBE3A-220ENST00000630424 TRAV21A0A0B4J279 112 aa11.71□□□□□ -0.53
UBE3A-220ENST00000630424 K7ENP7 123 aa11.71□□□□□ -0.53
UBE3A-220ENST00000630424 RPLP1P05386 114 aaKnown RBP11.71□□□□□ -0.53
UBE3A-220ENST00000630424 CNTFRP26992 372 aa11.71□□□□□ -0.53
UBE3A-220ENST00000630424 PPIFP30405 207 aaKnown RBP11.71□□□□□ -0.53
UBE3A-220ENST00000630424 ZNF362Q5T0B9 420 aaPredicted RBP11.71□□□□□ -0.53
UBE3A-220ENST00000630424 TMEM200BQ69YZ2 307 aa11.71□□□□□ -0.53
UBE3A-220ENST00000630424 ZNF525Q8N782 197 aa11.71□□□□□ -0.53
UBE3A-220ENST00000630424 MAPK1IP1LQ8NDC0 245 aa11.71□□□□□ -0.53
UBE3A-220ENST00000630424 FAM131CQ96AQ9 280 aa11.71□□□□□ -0.53
UBE3A-220ENST00000630424 NUDT11Q96G61 164 aa11.71□□□□□ -0.53
UBE3A-220ENST00000630424 PTPRFP10586 1907 aa11.71□□□□□ -0.54
UBE3A-220ENST00000630424 TMEM8BA6NDV4 472 aa11.71□□□□□ -0.54
UBE3A-220ENST00000630424 HOXA5P20719 270 aa11.71□□□□□ -0.54
UBE3A-220ENST00000630424 CRYGSP22914 178 aa11.71□□□□□ -0.54
UBE3A-220ENST00000630424 MST1P26927 711 aa11.71□□□□□ -0.54
UBE3A-220ENST00000630424 OR10W1Q8NGF6 305 aa11.71□□□□□ -0.54
UBE3A-220ENST00000630424 GTF3AQ92664 365 aaKnown RBP11.71□□□□□ -0.54
UBE3A-220ENST00000630424 OTORQ9NRC9 128 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms