RNA–Protein interactions for RNA: ENST00000628496.2

SOX2-OT-248, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 801 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-248ENST00000628496 MITD1Q8WV92 249 aa10.3□□□□□ -0.76
SOX2-OT-248ENST00000628496 CACNG8Q8WXS5 425 aa10.3□□□□□ -0.76
SOX2-OT-248ENST00000628496 TXN2Q99757 166 aa10.3□□□□□ -0.76
SOX2-OT-248ENST00000628496 SEC22CQ9BRL7 303 aa10.3□□□□□ -0.76
SOX2-OT-248ENST00000628496 HIPK2Q9H2X6 1198 aa10.3□□□□□ -0.76
SOX2-OT-248ENST00000628496 MRPL36Q9P0J6 103 aaKnown RBP10.3□□□□□ -0.76
SOX2-OT-248ENST00000628496 LY86O95711 162 aa10.29□□□□□ -0.76
SOX2-OT-248ENST00000628496 H2AFB2P0C5Z0 115 aa10.29□□□□□ -0.76
SOX2-OT-248ENST00000628496 FOLR2P14207 255 aa10.29□□□□□ -0.76
SOX2-OT-248ENST00000628496 NPY1RP25929 384 aa10.29□□□□□ -0.76
SOX2-OT-248ENST00000628496 OPRK1P41145 380 aa10.29□□□□□ -0.76
SOX2-OT-248ENST00000628496 MLANAQ16655 118 aa10.29□□□□□ -0.76
SOX2-OT-248ENST00000628496 TM4SF20Q53R12 229 aa10.29□□□□□ -0.76
SOX2-OT-248ENST00000628496 TMEM190Q8WZ59 177 aa10.29□□□□□ -0.76
SOX2-OT-248ENST00000628496 GAR1Q9NY12 217 aaKnown RBP10.29□□□□□ -0.76
SOX2-OT-248ENST00000628496 IGHV3OR16-8A0A075B7F1 116 aa10.28□□□□□ -0.76
SOX2-OT-248ENST00000628496 IZUMO1RA6ND01 250 aa10.28□□□□□ -0.76
SOX2-OT-248ENST00000628496 FAM90A26D6RGX4 464 aa10.28□□□□□ -0.76
SOX2-OT-248ENST00000628496 NDUFA4O00483 81 aa10.28□□□□□ -0.76
SOX2-OT-248ENST00000628496 NUPL2O15504 423 aaKnown RBP10.28□□□□□ -0.76
SOX2-OT-248ENST00000628496 GNG7O60262 68 aa10.28□□□□□ -0.76
SOX2-OT-248ENST00000628496 IFNA10P01566 189 aa10.28□□□□□ -0.76
SOX2-OT-248ENST00000628496 IAPPP10997 89 aa10.28□□□□□ -0.76
SOX2-OT-248ENST00000628496 GP9P14770 177 aa10.28□□□□□ -0.76
SOX2-OT-248ENST00000628496 CBLN1P23435 193 aa10.28□□□□□ -0.76
SOX2-OT-248ENST00000628496 DUSP18Q8NEJ0 188 aa10.28□□□□□ -0.76
SOX2-OT-248ENST00000628496 RNASEH2CQ8TDP1 164 aaKnown RBP10.28□□□□□ -0.76
SOX2-OT-248ENST00000628496 MAGT1Q9H0U3 335 aa10.28□□□□□ -0.76
SOX2-OT-248ENST00000628496 PRKDCP78527 4128 aaKnown RBP10.27□□□□□ -0.76
SOX2-OT-248ENST00000628496 IFNA21P01568 189 aa10.27□□□□□ -0.77
SOX2-OT-248ENST00000628496 NPBWR1P48145 328 aa10.27□□□□□ -0.77
SOX2-OT-248ENST00000628496 DEFB114Q30KQ6 69 aa10.27□□□□□ -0.77
SOX2-OT-248ENST00000628496 CD300EQ496F6 205 aaPredicted RBP10.27□□□□□ -0.77
SOX2-OT-248ENST00000628496 NRARPQ7Z6K4 114 aa10.27□□□□□ -0.77
SOX2-OT-248ENST00000628496 OR4D5Q8NGN0 318 aa10.27□□□□□ -0.77
SOX2-OT-248ENST00000628496 OR4X1Q8NH49 305 aa10.27□□□□□ -0.77
SOX2-OT-248ENST00000628496 ENKURQ8TC29 256 aa10.27□□□□□ -0.77
SOX2-OT-248ENST00000628496 ZNF431Q8TF32 576 aaPredicted RBP10.27□□□□□ -0.77
SOX2-OT-248ENST00000628496 OR10C1Q96KK4 312 aa10.27□□□□□ -0.77
SOX2-OT-248ENST00000628496 MLXQ9UH92 298 aa10.27□□□□□ -0.77
SOX2-OT-248ENST00000628496 UFC1Q9Y3C8 167 aa10.27□□□□□ -0.77
SOX2-OT-248ENST00000628496 LSM4Q9Y4Z0 139 aaKnown RBP10.27□□□□□ -0.77
SOX2-OT-248ENST00000628496 SELENOKQ9Y6D0 94 aa10.27□□□□□ -0.77
SOX2-OT-248ENST00000628496 U3KQ87 197 aa10.27□□□□□ -0.77
SOX2-OT-248ENST00000628496 RPS10-NUDT3A0A1W2PQS6 291 aa10.26□□□□□ -0.77
SOX2-OT-248ENST00000628496 C15orf62A8K5M9 175 aa10.26□□□□□ -0.77
SOX2-OT-248ENST00000628496 CCSO14618 274 aa10.26□□□□□ -0.77
SOX2-OT-248ENST00000628496 SYNGR2O43760 224 aa10.26□□□□□ -0.77
SOX2-OT-248ENST00000628496 CLN5O75503 358 aa10.26□□□□□ -0.77
SOX2-OT-248ENST00000628496 TMEM50AO95807 157 aa10.26□□□□□ -0.77
SOX2-OT-248ENST00000628496 C8orf88P0DMB2 117 aa10.26□□□□□ -0.77
SOX2-OT-248ENST00000628496 ELLP55199 621 aaPredicted RBP10.26□□□□□ -0.77
SOX2-OT-248ENST00000628496 ID3Q02535 119 aa10.26□□□□□ -0.77
SOX2-OT-248ENST00000628496 RELQ04864 619 aaPredicted RBP10.26□□□□□ -0.77
SOX2-OT-248ENST00000628496 DEFB121Q5J5C9 76 aa10.26□□□□□ -0.77
SOX2-OT-248ENST00000628496 PRSS54Q6PEW0 395 aa10.26□□□□□ -0.77
SOX2-OT-248ENST00000628496 NOXA1Q86UR1 476 aa10.26□□□□□ -0.77
SOX2-OT-248ENST00000628496 UXS1Q8NBZ7 420 aa10.26□□□□□ -0.77
SOX2-OT-248ENST00000628496 DYNLRB2Q8TF09 96 aa10.26□□□□□ -0.77
SOX2-OT-248ENST00000628496 C20orf24Q9BUV8 137 aa10.26□□□□□ -0.77
SOX2-OT-248ENST00000628496 PALMDQ9NP74 551 aa10.26□□□□□ -0.77
SOX2-OT-248ENST00000628496 DAZ1Q9NQZ3 744 aaKnown RBP10.26□□□□□ -0.77
SOX2-OT-248ENST00000628496 ZNF207O43670 478 aaKnown RBP10.25□□□□□ -0.77
SOX2-OT-248ENST00000628496 MED6O75586 246 aa10.25□□□□□ -0.77
SOX2-OT-248ENST00000628496 SLC25A4P12235 298 aa10.25□□□□□ -0.77
SOX2-OT-248ENST00000628496 POLR2GP62487 172 aaKnown RBP eCLIP10.25□□□□□ -0.77
SOX2-OT-248ENST00000628496 IAH1Q2TAA2 248 aaPredicted RBP10.25□□□□□ -0.77
SOX2-OT-248ENST00000628496 LCN12Q6JVE5 192 aa10.25□□□□□ -0.77
SOX2-OT-248ENST00000628496 BTNL8Q6UX41 500 aa10.25□□□□□ -0.77
SOX2-OT-248ENST00000628496 OR2K2Q8NGT1 345 aa10.25□□□□□ -0.77
SOX2-OT-248ENST00000628496 MARC2Q969Z3 335 aa10.25□□□□□ -0.77
SOX2-OT-248ENST00000628496 TECRQ9NZ01 308 aaKnown RBP10.25□□□□□ -0.77
SOX2-OT-248ENST00000628496 WRBO00258 174 aa10.24□□□□□ -0.77
SOX2-OT-248ENST00000628496 YIF1AO95070 293 aa10.24□□□□□ -0.77
SOX2-OT-248ENST00000628496 IGKV1-17P01599 117 aa10.24□□□□□ -0.77
SOX2-OT-248ENST00000628496 IFNA4P05014 189 aa10.24□□□□□ -0.77
SOX2-OT-248ENST00000628496 IL5P05113 134 aa10.24□□□□□ -0.77
SOX2-OT-248ENST00000628496 NKX2-1P43699 371 aaPredicted RBP10.24□□□□□ -0.77
SOX2-OT-248ENST00000628496 RND2P52198 227 aa10.24□□□□□ -0.77
SOX2-OT-248ENST00000628496 ATP5IP56385 69 aaPredicted RBP10.24□□□□□ -0.77
SOX2-OT-248ENST00000628496 DEFA1P59665 94 aa10.24□□□□□ -0.77
SOX2-OT-248ENST00000628496 DEFA3P59666 94 aa10.24□□□□□ -0.77
SOX2-OT-248ENST00000628496 CD69Q07108 199 aa10.24□□□□□ -0.77
SOX2-OT-248ENST00000628496 TOMM20LQ6UXN7 152 aa10.24□□□□□ -0.77
SOX2-OT-248ENST00000628496 ZNF600Q6ZNG1 722 aa10.24□□□□□ -0.77
SOX2-OT-248ENST00000628496 SLC16A13Q7RTY0 426 aa10.24□□□□□ -0.77
SOX2-OT-248ENST00000628496 C12orf45Q8N5I9 185 aaPredicted RBP10.24□□□□□ -0.77
SOX2-OT-248ENST00000628496 ZBTB8BQ8NAP8 495 aaPredicted RBP10.24□□□□□ -0.77
SOX2-OT-248ENST00000628496 TMEM116Q8NCL8 245 aa10.24□□□□□ -0.77
SOX2-OT-248ENST00000628496 CIB3Q96Q77 187 aaPredicted RBP10.24□□□□□ -0.77
SOX2-OT-248ENST00000628496 ZFAND3Q9H8U3 227 aa10.24□□□□□ -0.77
SOX2-OT-248ENST00000628496 MRPL27Q9P0M9 148 aaKnown RBP10.24□□□□□ -0.77
SOX2-OT-248ENST00000628496 PUS1Q9Y606 427 aaKnown RBP eCLIP10.24□□□□□ -0.77
SOX2-OT-248ENST00000628496 ZNF785A8K8V0 405 aa10.23□□□□□ -0.77
SOX2-OT-248ENST00000628496 H3BP45 60 aa10.23□□□□□ -0.77
SOX2-OT-248ENST00000628496 J3QL48 77 aa10.23□□□□□ -0.77
SOX2-OT-248ENST00000628496 K7EMT4 169 aa10.23□□□□□ -0.77
SOX2-OT-248ENST00000628496 IGLC1P0CG04 106 aa10.23□□□□□ -0.77
SOX2-OT-248ENST00000628496 TIGITQ495A1 244 aa10.23□□□□□ -0.77
SOX2-OT-248ENST00000628496 ETFRF1Q6IPR1 90 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms