RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 SSMEM1Q8WWF3 244 aa7.51□□□□□ -1.21
PDLIM5-223ENST00000627587 RASL11BQ9BPW5 248 aa7.51□□□□□ -1.21
PDLIM5-223ENST00000627587 HRH4Q9H3N8 390 aa7.51□□□□□ -1.21
PDLIM5-223ENST00000627587 VSIRQ9H7M9 311 aa7.51□□□□□ -1.21
PDLIM5-223ENST00000627587 CORTO00230 105 aa7.5□□□□□ -1.21
PDLIM5-223ENST00000627587 FSHBP01225 129 aa7.5□□□□□ -1.21
PDLIM5-223ENST00000627587 GPX4P36969 197 aaPredicted RBP7.5□□□□□ -1.21
PDLIM5-223ENST00000627587 OPRK1P41145 380 aa7.5□□□□□ -1.21
PDLIM5-223ENST00000627587 CX3CL1P78423 397 aa7.5□□□□□ -1.21
PDLIM5-223ENST00000627587 TEPPQ6URK8 271 aa7.5□□□□□ -1.21
PDLIM5-223ENST00000627587 OR1P1Q8NH06 330 aa7.5□□□□□ -1.21
PDLIM5-223ENST00000627587 CACNG8Q8WXS5 425 aa7.5□□□□□ -1.21
PDLIM5-223ENST00000627587 ARPC1AQ92747 370 aa7.5□□□□□ -1.21
PDLIM5-223ENST00000627587 SSX3Q99909 188 aa7.5□□□□□ -1.21
PDLIM5-223ENST00000627587 FNDC4Q9H6D8 234 aaPredicted RBP7.5□□□□□ -1.21
PDLIM5-223ENST00000627587 LSM4Q9Y4Z0 139 aaKnown RBP7.5□□□□□ -1.21
PDLIM5-223ENST00000627587 F11RQ9Y624 299 aaKnown RBP7.5□□□□□ -1.21
PDLIM5-223ENST00000627587 IGKV1OR2-108A0A075B7D4 117 aa7.49□□□□□ -1.21
PDLIM5-223ENST00000627587 NUDT19A8MXV4 375 aa7.49□□□□□ -1.21
PDLIM5-223ENST00000627587 SOX15O60248 233 aa7.49□□□□□ -1.21
PDLIM5-223ENST00000627587 HLA-DRB1P01911 266 aa7.49□□□□□ -1.21
PDLIM5-223ENST00000627587 ELLP55199 621 aaPredicted RBP7.49□□□□□ -1.21
PDLIM5-223ENST00000627587 RAB31Q13636 194 aa7.49□□□□□ -1.21
PDLIM5-223ENST00000627587 ASPHD1Q5U4P2 390 aa7.49□□□□□ -1.21
PDLIM5-223ENST00000627587 SLC16A13Q7RTY0 426 aa7.49□□□□□ -1.21
PDLIM5-223ENST00000627587 MARC2Q969Z3 335 aa7.49□□□□□ -1.21
PDLIM5-223ENST00000627587 SLC35E1Q96K37 410 aa7.49□□□□□ -1.21
PDLIM5-223ENST00000627587 FAM103A1Q9BTL3 118 aaKnown RBP7.49□□□□□ -1.21
PDLIM5-223ENST00000627587 KCNIP2Q9NS61 270 aa7.49□□□□□ -1.21
PDLIM5-223ENST00000627587 TSPAN15O95858 294 aa7.49□□□□□ -1.21
PDLIM5-223ENST00000627587 MBP02144 154 aa7.49□□□□□ -1.21
PDLIM5-223ENST00000627587 AMY1AP04745 511 aa7.49□□□□□ -1.21
PDLIM5-223ENST00000627587 EGR2P11161 476 aaPredicted RBP7.49□□□□□ -1.21
PDLIM5-223ENST00000627587 DEFA4P12838 97 aa7.49□□□□□ -1.21
PDLIM5-223ENST00000627587 GAMTQ14353 236 aa7.49□□□□□ -1.21
PDLIM5-223ENST00000627587 ZNF726P1Q15940 193 aa7.49□□□□□ -1.21
PDLIM5-223ENST00000627587 TMEM41BQ5BJD5 291 aa7.49□□□□□ -1.21
PDLIM5-223ENST00000627587 ETFRF1Q6IPR1 90 aa7.49□□□□□ -1.21
PDLIM5-223ENST00000627587 ACSM6Q6P461 480 aa7.49□□□□□ -1.21
PDLIM5-223ENST00000627587 IL34Q6ZMJ4 242 aa7.49□□□□□ -1.21
PDLIM5-223ENST00000627587 SSX7Q7RTT5 188 aa7.49□□□□□ -1.21
PDLIM5-223ENST00000627587 TMEM144Q7Z5S9 345 aa7.49□□□□□ -1.21
PDLIM5-223ENST00000627587 MISP3Q96FF7 219 aa7.49□□□□□ -1.21
PDLIM5-223ENST00000627587 RBM14Q96PK6 669 aaKnown RBP7.49□□□□□ -1.21
PDLIM5-223ENST00000627587 MGST2Q99735 147 aa7.49□□□□□ -1.21
PDLIM5-223ENST00000627587 SLC25A33Q9BSK2 321 aa7.49□□□□□ -1.21
PDLIM5-223ENST00000627587 ESM1Q9NQ30 184 aa7.49□□□□□ -1.21
PDLIM5-223ENST00000627587 RPRMQ9NS64 109 aa7.49□□□□□ -1.21
PDLIM5-223ENST00000627587 MRPL36Q9P0J6 103 aaKnown RBP7.49□□□□□ -1.21
PDLIM5-223ENST00000627587 MOB4Q9Y3A3 225 aa7.49□□□□□ -1.21
PDLIM5-223ENST00000627587 MGAM2Q2M2H8 2515 aa7.49□□□□□ -1.21
PDLIM5-223ENST00000627587 MEGF8Q7Z7M0 2845 aa7.48□□□□□ -1.21
PDLIM5-223ENST00000627587 IGHV7-81A0A0B4J1V7 117 aa7.48□□□□□ -1.21
PDLIM5-223ENST00000627587 RAB19A4D1S5 217 aa7.48□□□□□ -1.21
PDLIM5-223ENST00000627587 AGPAT2O15120 278 aa7.48□□□□□ -1.21
PDLIM5-223ENST00000627587 TSPAN9O75954 239 aa7.48□□□□□ -1.21
PDLIM5-223ENST00000627587 H2AFB1P0C5Y9 115 aa7.48□□□□□ -1.21
PDLIM5-223ENST00000627587 CTRB1P17538 263 aa7.48□□□□□ -1.21
PDLIM5-223ENST00000627587 SMCPP49901 116 aaPredicted RBP7.48□□□□□ -1.21
PDLIM5-223ENST00000627587 AANATQ16613 207 aa7.48□□□□□ -1.21
PDLIM5-223ENST00000627587 FFAR4Q5NUL3 377 aa7.48□□□□□ -1.21
PDLIM5-223ENST00000627587 CTRB2Q6GPI1 263 aa7.48□□□□□ -1.21
PDLIM5-223ENST00000627587 TMEM219Q86XT9 240 aa7.48□□□□□ -1.21
PDLIM5-223ENST00000627587 BCL6BQ8N143 479 aaPredicted RBP7.48□□□□□ -1.21
PDLIM5-223ENST00000627587 EIF4E3Q8N5X7 224 aaKnown RBP7.48□□□□□ -1.21
PDLIM5-223ENST00000627587 OR1L6Q8NGR2 347 aa7.48□□□□□ -1.21
PDLIM5-223ENST00000627587 HSPB9Q9BQS6 159 aa7.48□□□□□ -1.21
PDLIM5-223ENST00000627587 SCRT1Q9BWW7 348 aa7.48□□□□□ -1.21
PDLIM5-223ENST00000627587 GGTLC1Q9BX51 225 aa7.48□□□□□ -1.21
PDLIM5-223ENST00000627587 WNT10AQ9GZT5 417 aa7.48□□□□□ -1.21
PDLIM5-223ENST00000627587 PITPNC1Q9UKF7 332 aa7.48□□□□□ -1.21
PDLIM5-223ENST00000627587 MDFIC2A0A1B0GVS7 189 aa7.47□□□□□ -1.21
PDLIM5-223ENST00000627587 H3BUX3 64 aa7.47□□□□□ -1.21
PDLIM5-223ENST00000627587 CLDN34H7C241 214 aa7.47□□□□□ -1.21
PDLIM5-223ENST00000627587 I3L521 148 aa7.47□□□□□ -1.21
PDLIM5-223ENST00000627587 RAB2AP61019 212 aa7.47□□□□□ -1.21
PDLIM5-223ENST00000627587 SRSF3P84103 164 aaKnown RBP7.47□□□□□ -1.21
PDLIM5-223ENST00000627587 ACOT6Q3I5F7 207 aaPredicted RBP7.47□□□□□ -1.21
PDLIM5-223ENST00000627587 SPSB3Q6PJ21 355 aa7.47□□□□□ -1.21
PDLIM5-223ENST00000627587 COMMD1Q8N668 190 aa7.47□□□□□ -1.21
PDLIM5-223ENST00000627587 SIGLECL1Q8N7X8 197 aa7.47□□□□□ -1.21
PDLIM5-223ENST00000627587 C5orf56Q8N8D9 126 aa7.47□□□□□ -1.21
PDLIM5-223ENST00000627587 LFNGQ8NES3 379 aa7.47□□□□□ -1.21
PDLIM5-223ENST00000627587 OR2T6Q8NHC8 308 aa7.47□□□□□ -1.21
PDLIM5-223ENST00000627587 C22orf15Q8WYQ4 148 aa7.47□□□□□ -1.21
PDLIM5-223ENST00000627587 ACY3Q96HD9 319 aa7.47□□□□□ -1.21
PDLIM5-223ENST00000627587 PXMP4Q9Y6I8 212 aa7.47□□□□□ -1.21
PDLIM5-223ENST00000627587 A0A1B0GUS0 222 aa7.47□□□□□ -1.21
PDLIM5-223ENST00000627587 ANKRD34BA5PLL1 514 aa7.47□□□□□ -1.21
PDLIM5-223ENST00000627587 NPIPB5A8MRT5 1133 aa7.47□□□□□ -1.21
PDLIM5-223ENST00000627587 CYB5BO43169 146 aa7.47□□□□□ -1.21
PDLIM5-223ENST00000627587 YIF1AO95070 293 aa7.47□□□□□ -1.21
PDLIM5-223ENST00000627587 IGHV3-48P01763 117 aa7.47□□□□□ -1.21
PDLIM5-223ENST00000627587 HBE1P02100 147 aa7.47□□□□□ -1.21
PDLIM5-223ENST00000627587 CRYGCP07315 174 aa7.47□□□□□ -1.21
PDLIM5-223ENST00000627587 RNASE1P07998 156 aaKnown RBP7.47□□□□□ -1.21
PDLIM5-223ENST00000627587 M6PRP20645 277 aa7.47□□□□□ -1.21
PDLIM5-223ENST00000627587 UQCC3Q6UW78 93 aa7.47□□□□□ -1.21
PDLIM5-223ENST00000627587 RPP25LQ8N5L8 163 aaKnown RBP7.47□□□□□ -1.21
PDLIM5-223ENST00000627587 OR10G4Q8NGN3 311 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms