RNA–Protein interactions for RNA: ENST00000627490.2

PBX1-222, Transcript of PBX homeobox 1, humanhuman

TSL 2 BASIC

Gene PBX1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-222ENST00000627490 OR1L4Q8NGR5 311 aa16.34■□□□□ 0.21
PBX1-222ENST00000627490 ZNF596Q8TC21 504 aa16.34■□□□□ 0.21
PBX1-222ENST00000627490 ITLN2Q8WWU7 325 aaPredicted RBP16.34■□□□□ 0.21
PBX1-222ENST00000627490 H0YJW9 148 aa16.33■□□□□ 0.21
PBX1-222ENST00000627490 NDUFB7P17568 137 aa16.33■□□□□ 0.21
PBX1-222ENST00000627490 SUB1P53999 127 aaKnown RBP eCLIP16.33■□□□□ 0.21
PBX1-222ENST00000627490 PDPNQ86YL7 162 aa16.33■□□□□ 0.21
PBX1-222ENST00000627490 HARBI1Q96MB7 349 aa16.33■□□□□ 0.21
PBX1-222ENST00000627490 NUPR1O60356 82 aa16.33■□□□□ 0.2
PBX1-222ENST00000627490 WFDC8Q8IUA0 241 aa16.33■□□□□ 0.2
PBX1-222ENST00000627490 MRPL20Q9BYC9 149 aaKnown RBP16.33■□□□□ 0.2
PBX1-222ENST00000627490 DNAJC4Q9NNZ3 241 aa16.33■□□□□ 0.2
PBX1-222ENST00000627490 POLR3KQ9Y2Y1 108 aaPredicted RBP16.33■□□□□ 0.2
PBX1-222ENST00000627490 PSMB11A5LHX3 300 aa16.32■□□□□ 0.2
PBX1-222ENST00000627490 PRB1P04280 392 aa16.32■□□□□ 0.2
PBX1-222ENST00000627490 IER3P46695 156 aa16.32■□□□□ 0.2
PBX1-222ENST00000627490 TMEM186Q96B77 213 aa16.32■□□□□ 0.2
PBX1-222ENST00000627490 FLYWCH2Q96CP2 140 aaKnown RBP16.32■□□□□ 0.2
PBX1-222ENST00000627490 TP53TG3Q9ULZ0 132 aa16.32■□□□□ 0.2
PBX1-222ENST00000627490 DYSFO75923 2080 aa16.31■□□□□ 0.2
PBX1-222ENST00000627490 C17orf100A8MU93 164 aa16.31■□□□□ 0.2
PBX1-222ENST00000627490 SNURFLB1AK76 121 aa16.31■□□□□ 0.2
PBX1-222ENST00000627490 OR10J3Q5JRS4 329 aa16.31■□□□□ 0.2
PBX1-222ENST00000627490 OR8I2Q8N0Y5 310 aa16.31■□□□□ 0.2
PBX1-222ENST00000627490 OR4C13Q8NGP0 309 aa16.31■□□□□ 0.2
PBX1-222ENST00000627490 MISP3Q96FF7 219 aa16.31■□□□□ 0.2
PBX1-222ENST00000627490 IGF2BP2-AS1Q96M15 143 aa16.31■□□□□ 0.2
PBX1-222ENST00000627490 HIVEP3Q5T1R4 2406 aa16.31■□□□□ 0.2
PBX1-222ENST00000627490 SMIM27A0A1W2PRY6 76 aa16.31■□□□□ 0.2
PBX1-222ENST00000627490 DPRXA6NFQ7 191 aa16.31■□□□□ 0.2
PBX1-222ENST00000627490 GGTLC3B5MD39 225 aa16.31■□□□□ 0.2
PBX1-222ENST00000627490 RASL11AQ6T310 242 aa16.31■□□□□ 0.2
PBX1-222ENST00000627490 BAGE3Q86Y29 109 aa16.31■□□□□ 0.2
PBX1-222ENST00000627490 BAGE2Q86Y30 109 aa16.31■□□□□ 0.2
PBX1-222ENST00000627490 OR9G1Q8NH87 305 aa16.31■□□□□ 0.2
PBX1-222ENST00000627490 FAM167A-AS1Q96KT0 104 aa16.31■□□□□ 0.2
PBX1-222ENST00000627490 ZNF430Q9H8G1 570 aaPredicted RBP16.31■□□□□ 0.2
PBX1-222ENST00000627490 CDC42EP3Q9UKI2 254 aa16.31■□□□□ 0.2
PBX1-222ENST00000627490 GRIFINA4D1Z8 144 aa16.3■□□□□ 0.2
PBX1-222ENST00000627490 ZNF705FA8MVS1 300 aaPredicted RBP16.3■□□□□ 0.2
PBX1-222ENST00000627490 SERF1AO75920 110 aa16.3■□□□□ 0.2
PBX1-222ENST00000627490 HLA-DQA1P01909 254 aa16.3■□□□□ 0.2
PBX1-222ENST00000627490 ZNF705DP0CH99 300 aaPredicted RBP16.3■□□□□ 0.2
PBX1-222ENST00000627490 ZNF705BP0CI00 300 aaPredicted RBP16.3■□□□□ 0.2
PBX1-222ENST00000627490 SUMO1P63165 101 aaKnown RBP16.3■□□□□ 0.2
PBX1-222ENST00000627490 OR5I1Q13606 314 aa16.3■□□□□ 0.2
PBX1-222ENST00000627490 USF2Q15853 346 aaPredicted RBP16.3■□□□□ 0.2
PBX1-222ENST00000627490 TEX43Q6ZNM6 134 aa16.3■□□□□ 0.2
PBX1-222ENST00000627490 THAP8Q8NA92 274 aa16.3■□□□□ 0.2
PBX1-222ENST00000627490 OR5AU1Q8NGC0 362 aa16.3■□□□□ 0.2
PBX1-222ENST00000627490 C20orf144Q9BQM9 153 aa16.3■□□□□ 0.2
PBX1-222ENST00000627490 A0A1B0GUS0 222 aa16.29■□□□□ 0.2
PBX1-222ENST00000627490 VSTM5A8MXK1 200 aa16.29■□□□□ 0.2
PBX1-222ENST00000627490 KALRNO60229 2985 aa16.29■□□□□ 0.2
PBX1-222ENST00000627490 IGLV2-8P01709 118 aa16.29■□□□□ 0.2
PBX1-222ENST00000627490 AMY1AP04745 511 aa16.29■□□□□ 0.2
PBX1-222ENST00000627490 LINC00310P59036 64 aa16.29■□□□□ 0.2
PBX1-222ENST00000627490 BPIFB3P59826 476 aa16.29■□□□□ 0.2
PBX1-222ENST00000627490 FAM231DQ6ZW35 169 aa16.29■□□□□ 0.2
PBX1-222ENST00000627490 MOB3BQ86TA1 216 aa16.29■□□□□ 0.2
PBX1-222ENST00000627490 TBX15Q96SF7 602 aa16.29■□□□□ 0.2
PBX1-222ENST00000627490 CHRDL1Q9BU40 450 aa16.29■□□□□ 0.2
PBX1-222ENST00000627490 SLC25A2Q9BXI2 301 aa16.29■□□□□ 0.2
PBX1-222ENST00000627490 GRNP28799 593 aaKnown RBP16.28■□□□□ 0.2
PBX1-222ENST00000627490 ZNF137PP52743 207 aa16.28■□□□□ 0.2
PBX1-222ENST00000627490 BSPH1Q075Z2 132 aa16.28■□□□□ 0.2
PBX1-222ENST00000627490 TMEM136Q6ZRR5 245 aa16.28■□□□□ 0.2
PBX1-222ENST00000627490 WASHC3Q9Y3C0 194 aa16.28■□□□□ 0.2
PBX1-222ENST00000627490 NBASA2RRP1 2371 aa16.28■□□□□ 0.2
PBX1-222ENST00000627490 PPIAL4EA0A075B759 164 aa16.28■□□□□ 0.2
PBX1-222ENST00000627490 IZUMO1RA6ND01 250 aa16.28■□□□□ 0.2
PBX1-222ENST00000627490 PPIAL4DF5H284 164 aa16.28■□□□□ 0.2
PBX1-222ENST00000627490 M0QZK8 103 aa16.28■□□□□ 0.2
PBX1-222ENST00000627490 M0R143 59 aa16.28■□□□□ 0.2
PBX1-222ENST00000627490 PPIAL4FP0DN26 164 aa16.28■□□□□ 0.2
PBX1-222ENST00000627490 BRS3P32247 399 aa16.28■□□□□ 0.2
PBX1-222ENST00000627490 MC5RP33032 325 aa16.28■□□□□ 0.2
PBX1-222ENST00000627490 IBA57Q5T440 356 aaKnown RBP16.28■□□□□ 0.2
PBX1-222ENST00000627490 TMEM200BQ69YZ2 307 aa16.28■□□□□ 0.2
PBX1-222ENST00000627490 Q6ZWC4 215 aa16.28■□□□□ 0.2
PBX1-222ENST00000627490 OR10W1Q8NGF6 305 aa16.28■□□□□ 0.2
PBX1-222ENST00000627490 NAT8BQ9UHF3 227 aa16.28■□□□□ 0.2
PBX1-222ENST00000627490 PPIAL4AQ9Y536 164 aa16.28■□□□□ 0.2
PBX1-222ENST00000627490 TCRBV4S1A1TA0A5B7 111 aa16.27■□□□□ 0.2
PBX1-222ENST00000627490 TMEM178BH3BS89 294 aa16.27■□□□□ 0.2
PBX1-222ENST00000627490 TNFRSF13BO14836 293 aaPredicted RBP16.27■□□□□ 0.2
PBX1-222ENST00000627490 COX7A2P2O60397 106 aa16.27■□□□□ 0.2
PBX1-222ENST00000627490 REG1AP05451 166 aa16.27■□□□□ 0.2
PBX1-222ENST00000627490 GATA2P23769 480 aaPredicted RBP16.27■□□□□ 0.2
PBX1-222ENST00000627490 UBE2L3P68036 154 aaKnown RBP16.27■□□□□ 0.2
PBX1-222ENST00000627490 ADIPOQQ15848 244 aa16.27■□□□□ 0.2
PBX1-222ENST00000627490 LRRC10Q5BKY1 277 aa16.27■□□□□ 0.2
PBX1-222ENST00000627490 C10orf113Q5VZT2 155 aa16.27■□□□□ 0.2
PBX1-222ENST00000627490 ETFRF1Q6IPR1 90 aa16.27■□□□□ 0.2
PBX1-222ENST00000627490 STXBP6Q8NFX7 210 aa16.27■□□□□ 0.2
PBX1-222ENST00000627490 WIPF2Q8TF74 440 aaPredicted RBP16.27■□□□□ 0.2
PBX1-222ENST00000627490 NDUFB3O43676 98 aa16.26■□□□□ 0.19
PBX1-222ENST00000627490 SNRPCP09234 159 aaKnown RBP16.26■□□□□ 0.19
PBX1-222ENST00000627490 CCL8P80075 99 aa16.26■□□□□ 0.19
PBX1-222ENST00000627490 VMA21Q3ZAQ7 101 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms