RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 CYCSP99999 105 aaKnown RBP11.32□□□□□ -0.6
PNKP-221ENST00000627317 SPANXN5Q5MJ07 72 aa11.32□□□□□ -0.6
PNKP-221ENST00000627317 ACSM6Q6P461 480 aa11.32□□□□□ -0.6
PNKP-221ENST00000627317 TMEM170AQ8WVE7 144 aa11.32□□□□□ -0.6
PNKP-221ENST00000627317 NMES1Q9C002 83 aa11.32□□□□□ -0.6
PNKP-221ENST00000627317 PSENENQ9NZ42 101 aa11.32□□□□□ -0.6
PNKP-221ENST00000627317 STRAPQ9Y3F4 350 aaKnown RBP11.32□□□□□ -0.6
PNKP-221ENST00000627317 OR2T8A6NH00 312 aa11.31□□□□□ -0.6
PNKP-221ENST00000627317 PPP5D1E7EU14 171 aa11.31□□□□□ -0.6
PNKP-221ENST00000627317 BMPR1BO00238 502 aa11.31□□□□□ -0.6
PNKP-221ENST00000627317 IGHV3-48P01763 117 aa11.31□□□□□ -0.6
PNKP-221ENST00000627317 CD33P20138 364 aa11.31□□□□□ -0.6
PNKP-221ENST00000627317 HOXD3P31249 432 aaPredicted RBP11.31□□□□□ -0.6
PNKP-221ENST00000627317 SLURP1P55000 103 aa11.31□□□□□ -0.6
PNKP-221ENST00000627317 H2BFSP57053 126 aa11.31□□□□□ -0.6
PNKP-221ENST00000627317 RAB32Q13637 225 aa11.31□□□□□ -0.6
PNKP-221ENST00000627317 RPEL1Q2QD12 228 aa11.31□□□□□ -0.6
PNKP-221ENST00000627317 SMIM8Q96KF7 97 aa11.31□□□□□ -0.6
PNKP-221ENST00000627317 OR4C12Q96R67 309 aa11.31□□□□□ -0.6
PNKP-221ENST00000627317 GAR1Q9NY12 217 aaKnown RBP11.31□□□□□ -0.6
PNKP-221ENST00000627317 GGCTO75223 188 aaKnown RBP11.3□□□□□ -0.6
PNKP-221ENST00000627317 CLEC3BP05452 202 aa11.3□□□□□ -0.6
PNKP-221ENST00000627317 IGLL1P15814 213 aa11.3□□□□□ -0.6
PNKP-221ENST00000627317 NPBWR1P48145 328 aa11.3□□□□□ -0.6
PNKP-221ENST00000627317 TAS2R30P59541 319 aa11.3□□□□□ -0.6
PNKP-221ENST00000627317 FCN2Q15485 313 aa11.3□□□□□ -0.6
PNKP-221ENST00000627317 LRRC37A5PQ49AS3 106 aa11.3□□□□□ -0.6
PNKP-221ENST00000627317 ETFRF1Q6IPR1 90 aa11.3□□□□□ -0.6
PNKP-221ENST00000627317 BSCL2Q96G97 398 aaPredicted RBP11.3□□□□□ -0.6
PNKP-221ENST00000627317 ATP6V0BQ99437 205 aa11.3□□□□□ -0.6
PNKP-221ENST00000627317 TXN2Q99757 166 aa11.3□□□□□ -0.6
PNKP-221ENST00000627317 FNDC4Q9H6D8 234 aaPredicted RBP11.3□□□□□ -0.6
PNKP-221ENST00000627317 ZC4H2Q9NQZ6 224 aa11.3□□□□□ -0.6
PNKP-221ENST00000627317 TGOLN2O43493 480 aa11.29□□□□□ -0.6
PNKP-221ENST00000627317 GNG7O60262 68 aa11.29□□□□□ -0.6
PNKP-221ENST00000627317 TSC22D2O75157 780 aa11.29□□□□□ -0.6
PNKP-221ENST00000627317 SCGB2A1O75556 95 aa11.29□□□□□ -0.6
PNKP-221ENST00000627317 TMEM50AO95807 157 aa11.29□□□□□ -0.6
PNKP-221ENST00000627317 PRB2P02812 416 aaPredicted RBP11.29□□□□□ -0.6
PNKP-221ENST00000627317 RLN2P04090 185 aa11.29□□□□□ -0.6
PNKP-221ENST00000627317 SLC25A4P12235 298 aa11.29□□□□□ -0.6
PNKP-221ENST00000627317 RRAS2P62070 204 aaPredicted RBP11.29□□□□□ -0.6
PNKP-221ENST00000627317 IL15RAQ13261 267 aa11.29□□□□□ -0.6
PNKP-221ENST00000627317 SPSB3Q6PJ21 355 aa11.29□□□□□ -0.6
PNKP-221ENST00000627317 SLC16A13Q7RTY0 426 aa11.29□□□□□ -0.6
PNKP-221ENST00000627317 RCC1LQ96I51 464 aaKnown RBP11.29□□□□□ -0.6
PNKP-221ENST00000627317 F8W735 103 aaPredicted RBP11.28□□□□□ -0.6
PNKP-221ENST00000627317 NUPL2O15504 423 aaKnown RBP11.28□□□□□ -0.6
PNKP-221ENST00000627317 CXCL3P19876 107 aa11.28□□□□□ -0.6
PNKP-221ENST00000627317 FCGR2BP31994 310 aaPredicted RBP11.28□□□□□ -0.6
PNKP-221ENST00000627317 BCAP31P51572 246 aa11.28□□□□□ -0.6
PNKP-221ENST00000627317 CAV2P51636 162 aa11.28□□□□□ -0.6
PNKP-221ENST00000627317 RND2P52198 227 aa11.28□□□□□ -0.6
PNKP-221ENST00000627317 PAX9P55771 341 aa11.28□□□□□ -0.6
PNKP-221ENST00000627317 CD69Q07108 199 aa11.28□□□□□ -0.6
PNKP-221ENST00000627317 OR11H7Q8NGC8 314 aa11.28□□□□□ -0.6
PNKP-221ENST00000627317 PPP1R1CQ8WVI7 109 aa11.28□□□□□ -0.6
PNKP-221ENST00000627317 DCUN1D4Q92564 292 aa11.28□□□□□ -0.6
PNKP-221ENST00000627317 DLX4Q92988 240 aaPredicted RBP11.28□□□□□ -0.6
PNKP-221ENST00000627317 ACY3Q96HD9 319 aa11.28□□□□□ -0.6
PNKP-221ENST00000627317 SLC35E1Q96K37 410 aa11.28□□□□□ -0.6
PNKP-221ENST00000627317 OVOL1O14753 267 aa11.27□□□□□ -0.61
PNKP-221ENST00000627317 DEDDO75618 318 aa11.27□□□□□ -0.61
PNKP-221ENST00000627317 OR2C1O95371 312 aa11.27□□□□□ -0.61
PNKP-221ENST00000627317 METTL15P1P0C7V9 234 aa11.27□□□□□ -0.61
PNKP-221ENST00000627317 PET100P0DJ07 73 aa11.27□□□□□ -0.61
PNKP-221ENST00000627317 GPX4P36969 197 aaPredicted RBP11.27□□□□□ -0.61
PNKP-221ENST00000627317 SYNJ2BPP57105 145 aa11.27□□□□□ -0.61
PNKP-221ENST00000627317 MLANAQ16655 118 aa11.27□□□□□ -0.61
PNKP-221ENST00000627317 OR8G2PQ6IF36 304 aa11.27□□□□□ -0.61
PNKP-221ENST00000627317 REC114Q7Z4M0 266 aa11.27□□□□□ -0.61
PNKP-221ENST00000627317 OR4X1Q8NH49 305 aa11.27□□□□□ -0.61
PNKP-221ENST00000627317 IGHV3-35A0A0C4DH35 117 aa11.26□□□□□ -0.61
PNKP-221ENST00000627317 CLN5O75503 358 aa11.26□□□□□ -0.61
PNKP-221ENST00000627317 RELQ04864 619 aaPredicted RBP11.26□□□□□ -0.61
PNKP-221ENST00000627317 EGFEM1PQ0D2K5 195 aa11.26□□□□□ -0.61
PNKP-221ENST00000627317 KLF5Q13887 457 aaPredicted RBP11.26□□□□□ -0.61
PNKP-221ENST00000627317 FAM106AQ4KMX7 169 aa11.26□□□□□ -0.61
PNKP-221ENST00000627317 PRSS54Q6PEW0 395 aa11.26□□□□□ -0.61
PNKP-221ENST00000627317 TMEM14EPQ6UXP3 125 aa11.26□□□□□ -0.61
PNKP-221ENST00000627317 CACNG8Q8WXS5 425 aa11.26□□□□□ -0.61
PNKP-221ENST00000627317 WDR89Q96FK6 387 aaPredicted RBP11.26□□□□□ -0.61
PNKP-221ENST00000627317 CHRDL1Q9BU40 450 aa11.26□□□□□ -0.61
PNKP-221ENST00000627317 MCRIP2Q9BUT9 160 aaKnown RBP11.26□□□□□ -0.61
PNKP-221ENST00000627317 ZNF436Q9C0F3 470 aaPredicted RBP11.26□□□□□ -0.61
PNKP-221ENST00000627317 C11orf1Q9H5F2 150 aa11.26□□□□□ -0.61
PNKP-221ENST00000627317 AURKAIP1Q9NWT8 199 aaPredicted RBP11.26□□□□□ -0.61
PNKP-221ENST00000627317 MRPL36Q9P0J6 103 aaKnown RBP11.26□□□□□ -0.61
PNKP-221ENST00000627317 SEC14L6B5MCN3 397 aa11.25□□□□□ -0.61
PNKP-221ENST00000627317 E5RGE8 158 aa11.25□□□□□ -0.61
PNKP-221ENST00000627317 SCAF4O95104 1147 aaKnown RBP11.25□□□□□ -0.61
PNKP-221ENST00000627317 CTSGP08311 255 aa11.25□□□□□ -0.61
PNKP-221ENST00000627317 GIPP09681 153 aaPredicted RBP11.25□□□□□ -0.61
PNKP-221ENST00000627317 ADMP35318 185 aa11.25□□□□□ -0.61
PNKP-221ENST00000627317 KRTAP10-11P60412 298 aa11.25□□□□□ -0.61
PNKP-221ENST00000627317 ACOT7LQ6ZUV0 252 aa11.25□□□□□ -0.61
PNKP-221ENST00000627317 STX12Q86Y82 276 aa11.25□□□□□ -0.61
PNKP-221ENST00000627317 TMEM116Q8NCL8 245 aa11.25□□□□□ -0.61
PNKP-221ENST00000627317 OR10P1Q8NGE3 313 aa11.25□□□□□ -0.61
PNKP-221ENST00000627317 NPIPB3Q92617 1050 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms