RNA–Protein interactions for RNA: ENST00000627000.1

CHRNA4-209, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-209ENST00000627000 C1orf122Q6ZSJ8 110 aa15.69■□□□□ 0.1
CHRNA4-209ENST00000627000 KIR3DL3Q8N743 410 aa15.69■□□□□ 0.1
CHRNA4-209ENST00000627000 MISP3Q96FF7 219 aa15.69■□□□□ 0.1
CHRNA4-209ENST00000627000 AP4M1O00189 453 aa15.68■□□□□ 0.1
CHRNA4-209ENST00000627000 PNRC1Q12796 327 aaPredicted RBP15.68■□□□□ 0.1
CHRNA4-209ENST00000627000 CYP2G1PQ6ZSU1 146 aa15.68■□□□□ 0.1
CHRNA4-209ENST00000627000 LINC00469Q8N7U9 141 aa15.68■□□□□ 0.1
CHRNA4-209ENST00000627000 RNF5Q99942 180 aa15.68■□□□□ 0.1
CHRNA4-209ENST00000627000 SIRPDQ9H106 197 aa15.68■□□□□ 0.1
CHRNA4-209ENST00000627000 NAT8Q9UHE5 227 aa15.68■□□□□ 0.1
CHRNA4-209ENST00000627000 IGKV1D-37A0A075B6S9 117 aa15.68■□□□□ 0.1
CHRNA4-209ENST00000627000 SRSF12Q8WXF0 261 aaKnown RBP15.68■□□□□ 0.1
CHRNA4-209ENST00000627000 FUT9Q9Y231 359 aa15.68■□□□□ 0.1
CHRNA4-209ENST00000627000 YTHDF2Q9Y5A9 579 aaKnown RBP15.68■□□□□ 0.1
CHRNA4-209ENST00000627000 IGHV3-21A0A0B4J1V1 117 aa15.67■□□□□ 0.1
CHRNA4-209ENST00000627000 RND2P52198 227 aa15.67■□□□□ 0.1
CHRNA4-209ENST00000627000 ZNF90Q03938 601 aa15.67■□□□□ 0.1
CHRNA4-209ENST00000627000 TMEM241Q24JQ0 296 aa15.67■□□□□ 0.1
CHRNA4-209ENST00000627000 C1QL4Q86Z23 238 aa15.67■□□□□ 0.1
CHRNA4-209ENST00000627000 TMEM37Q8WXS4 190 aa15.67■□□□□ 0.1
CHRNA4-209ENST00000627000 URGCP-MRPS24S4R325 110 aa15.67■□□□□ 0.1
CHRNA4-209ENST00000627000 IGHV2-70DA0A0C4DH43 119 aa15.66■□□□□ 0.1
CHRNA4-209ENST00000627000 ADIRFQ15847 76 aa15.66■□□□□ 0.1
CHRNA4-209ENST00000627000 FAM209BQ5JX69 171 aa15.66■□□□□ 0.1
CHRNA4-209ENST00000627000 PVRIGQ6DKI7 326 aa15.66■□□□□ 0.1
CHRNA4-209ENST00000627000 ZNF114Q8NC26 417 aa15.66■□□□□ 0.1
CHRNA4-209ENST00000627000 EAF1Q96JC9 268 aaPredicted RBP15.66■□□□□ 0.1
CHRNA4-209ENST00000627000 SLC25A33Q9BSK2 321 aa15.66■□□□□ 0.1
CHRNA4-209ENST00000627000 B4DEV8 164 aa15.66■□□□□ 0.1
CHRNA4-209ENST00000627000 BBC3Q96PG8 261 aaPredicted RBP15.66■□□□□ 0.1
CHRNA4-209ENST00000627000 DMRT1Q9Y5R6 373 aa15.66■□□□□ 0.1
CHRNA4-209ENST00000627000 NBR2O15453 112 aa15.65■□□□□ 0.1
CHRNA4-209ENST00000627000 GATCO43716 136 aaKnown RBP15.65■□□□□ 0.1
CHRNA4-209ENST00000627000 MOSP00540 346 aa15.65■□□□□ 0.1
CHRNA4-209ENST00000627000 RPL23P62829 140 aaKnown RBP15.65■□□□□ 0.1
CHRNA4-209ENST00000627000 HES1Q14469 280 aa15.65■□□□□ 0.1
CHRNA4-209ENST00000627000 MRPL41Q8IXM3 137 aaKnown RBP15.65■□□□□ 0.1
CHRNA4-209ENST00000627000 ZNF503Q96F45 646 aa15.65■□□□□ 0.1
CHRNA4-209ENST00000627000 SSX3Q99909 188 aa15.65■□□□□ 0.1
CHRNA4-209ENST00000627000 DERL1Q9BUN8 251 aa15.65■□□□□ 0.1
CHRNA4-209ENST00000627000 DOK5Q9P104 306 aa15.65■□□□□ 0.1
CHRNA4-209ENST00000627000 SVEP1Q4LDE5 3571 aa15.65■□□□□ 0.1
CHRNA4-209ENST00000627000 PSMB11A5LHX3 300 aa15.65■□□□□ 0.1
CHRNA4-209ENST00000627000 NDUFS6O75380 124 aaKnown RBP15.65■□□□□ 0.1
CHRNA4-209ENST00000627000 CRYGCP07315 174 aa15.65■□□□□ 0.1
CHRNA4-209ENST00000627000 OR5G3P0C626 314 aa15.65■□□□□ 0.1
CHRNA4-209ENST00000627000 MORN5Q5VZ52 161 aa15.65■□□□□ 0.1
CHRNA4-209ENST00000627000 THAP8Q8NA92 274 aa15.65■□□□□ 0.1
CHRNA4-209ENST00000627000 Q8WTZ3 238 aa15.65■□□□□ 0.1
CHRNA4-209ENST00000627000 FLNCQ14315 2725 aa15.64■□□□□ 0.1
CHRNA4-209ENST00000627000 TCRBV4S1A1TA0A5B7 111 aa15.64■□□□□ 0.09
CHRNA4-209ENST00000627000 PDE6DO43924 150 aa15.64■□□□□ 0.09
CHRNA4-209ENST00000627000 NDUFB4O95168 129 aa15.64■□□□□ 0.09
CHRNA4-209ENST00000627000 ELOBQ15370 118 aa15.64■□□□□ 0.09
CHRNA4-209ENST00000627000 OR1P1Q8NH06 330 aa15.64■□□□□ 0.09
CHRNA4-209ENST00000627000 LPAR2Q9HBW0 351 aa15.64■□□□□ 0.09
CHRNA4-209ENST00000627000 F11RQ9Y624 299 aaKnown RBP15.64■□□□□ 0.09
CHRNA4-209ENST00000627000 TRAV20A0A0B4J274 112 aa15.63■□□□□ 0.09
CHRNA4-209ENST00000627000 TOX4O94842 621 aa15.63■□□□□ 0.09
CHRNA4-209ENST00000627000 CNIH1O95406 144 aa15.63■□□□□ 0.09
CHRNA4-209ENST00000627000 MT-CO2P00403 227 aa15.63■□□□□ 0.09
CHRNA4-209ENST00000627000 CXCL1P09341 107 aa15.63■□□□□ 0.09
CHRNA4-209ENST00000627000 TBX15Q96SF7 602 aa15.63■□□□□ 0.09
CHRNA4-209ENST00000627000 CSMD1Q96PZ7 3565 aa15.63■□□□□ 0.09
CHRNA4-209ENST00000627000 NDUFA3O95167 84 aa15.63■□□□□ 0.09
CHRNA4-209ENST00000627000 NPBQ8NG41 125 aa15.63■□□□□ 0.09
CHRNA4-209ENST00000627000 FAM103A1Q9BTL3 118 aaKnown RBP15.63■□□□□ 0.09
CHRNA4-209ENST00000627000 TECRQ9NZ01 308 aaKnown RBP15.63■□□□□ 0.09
CHRNA4-209ENST00000627000 USP9XQ93008 2570 aaPredicted RBP15.63■□□□□ 0.09
CHRNA4-209ENST00000627000 DOPEY1Q5JWR5 2465 aa15.62■□□□□ 0.09
CHRNA4-209ENST00000627000 TRAV5A0A0B4J249 113 aa15.62■□□□□ 0.09
CHRNA4-209ENST00000627000 SCO2A0A1W2PP80 73 aa15.62■□□□□ 0.09
CHRNA4-209ENST00000627000 CCL19Q99731 98 aa15.62■□□□□ 0.09
CHRNA4-209ENST00000627000 TGIF2-C20orf24A0A0A6YYL0 155 aa15.62■□□□□ 0.09
CHRNA4-209ENST00000627000 CLN5O75503 358 aa15.62■□□□□ 0.09
CHRNA4-209ENST00000627000 PDLIM4P50479 330 aa15.62■□□□□ 0.09
CHRNA4-209ENST00000627000 ETFRF1Q6IPR1 90 aa15.62■□□□□ 0.09
CHRNA4-209ENST00000627000 PATE2Q6UY27 113 aa15.62■□□□□ 0.09
CHRNA4-209ENST00000627000 ZFYVE26Q68DK2 2539 aa15.61■□□□□ 0.09
CHRNA4-209ENST00000627000 CXorf65A6NEN9 183 aa15.61■□□□□ 0.09
CHRNA4-209ENST00000627000 F6UZH7 168 aa15.61■□□□□ 0.09
CHRNA4-209ENST00000627000 OR7C2O60412 319 aa15.61■□□□□ 0.09
CHRNA4-209ENST00000627000 OR10J4P0C629 311 aa15.61■□□□□ 0.09
CHRNA4-209ENST00000627000 MINOS1Q5TGZ0 78 aa15.61■□□□□ 0.09
CHRNA4-209ENST00000627000 OR2T10Q8NGZ9 312 aa15.61■□□□□ 0.09
CHRNA4-209ENST00000627000 C19orf24Q9BVV8 132 aa15.61■□□□□ 0.09
CHRNA4-209ENST00000627000 GSX1Q9H4S2 264 aaPredicted RBP15.61■□□□□ 0.09
CHRNA4-209ENST00000627000 DNAJC4Q9NNZ3 241 aa15.61■□□□□ 0.09
CHRNA4-209ENST00000627000 MINOS1-NBL1R4GNA1 71 aa15.61■□□□□ 0.09
CHRNA4-209ENST00000627000 CCDC144NLQ6NUI1 221 aa15.6■□□□□ 0.09
CHRNA4-209ENST00000627000 OR5T1Q8NG75 326 aa15.6■□□□□ 0.09
CHRNA4-209ENST00000627000 OR4X1Q8NH49 305 aa15.6■□□□□ 0.09
CHRNA4-209ENST00000627000 UHRF2Q96PU4 802 aa15.6■□□□□ 0.09
CHRNA4-209ENST00000627000 WNT10AQ9GZT5 417 aa15.6■□□□□ 0.09
CHRNA4-209ENST00000627000 TNFRSF19Q9NS68 423 aa15.6■□□□□ 0.09
CHRNA4-209ENST00000627000 AURKAIP1Q9NWT8 199 aaPredicted RBP15.6■□□□□ 0.09
CHRNA4-209ENST00000627000 CLDN34H7C241 214 aa15.6■□□□□ 0.09
CHRNA4-209ENST00000627000 FXYD3Q14802 87 aa15.6■□□□□ 0.09
CHRNA4-209ENST00000627000 C5orf64Q2M2E5 130 aa15.6■□□□□ 0.09
CHRNA4-209ENST00000627000 C16orf82Q7Z2V1 217 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms