RNA–Protein interactions for RNA: ENST00000623266.1

PCDHB9-202, Transcript of protocadherin beta 9, humanhuman

TSL 4

Gene PCDHB9, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-202ENST00000623266 IGKV1-17P01599 117 aa6.62□□□□□ -1.35
PCDHB9-202ENST00000623266 CD5P06127 495 aa6.62□□□□□ -1.35
PCDHB9-202ENST00000623266 NPPCP23582 126 aa6.62□□□□□ -1.35
PCDHB9-202ENST00000623266 CRYBB3P26998 211 aa6.62□□□□□ -1.35
PCDHB9-202ENST00000623266 RCVRNP35243 200 aa6.62□□□□□ -1.35
PCDHB9-202ENST00000623266 SNCAP37840 140 aa6.62□□□□□ -1.35
PCDHB9-202ENST00000623266 RPL5P46777 297 aaKnown RBP6.62□□□□□ -1.35
PCDHB9-202ENST00000623266 TMEM187Q14656 261 aa6.62□□□□□ -1.35
PCDHB9-202ENST00000623266 RBMS2Q15434 407 aaKnown RBP6.62□□□□□ -1.35
PCDHB9-202ENST00000623266 Q8NAQ8 132 aa6.62□□□□□ -1.35
PCDHB9-202ENST00000623266 CSNK1G2-AS1Q8NCQ2 148 aa6.62□□□□□ -1.35
PCDHB9-202ENST00000623266 TERB2Q8NHR7 220 aa6.62□□□□□ -1.35
PCDHB9-202ENST00000623266 GLYATL2Q8WU03 294 aa6.62□□□□□ -1.35
PCDHB9-202ENST00000623266 ZNF486Q96H40 463 aaPredicted RBP6.62□□□□□ -1.35
PCDHB9-202ENST00000623266 GINS3Q9BRX5 216 aa6.62□□□□□ -1.35
PCDHB9-202ENST00000623266 C6orf62Q9GZU0 229 aaPredicted RBP6.62□□□□□ -1.35
PCDHB9-202ENST00000623266 C11orf68Q9H3H3 251 aaKnown RBP6.62□□□□□ -1.35
PCDHB9-202ENST00000623266 MTFP1Q9UDX5 166 aa6.62□□□□□ -1.35
PCDHB9-202ENST00000623266 FBXL17Q9UF56 701 aa6.62□□□□□ -1.35
PCDHB9-202ENST00000623266 U3KQE9 123 aa6.62□□□□□ -1.35
PCDHB9-202ENST00000623266 KIAA1109Q2LD37 5005 aa6.61□□□□□ -1.35
PCDHB9-202ENST00000623266 TRAV2A0A0B4J234 112 aa6.61□□□□□ -1.35
PCDHB9-202ENST00000623266 CA1P00915 261 aaPredicted RBP6.61□□□□□ -1.35
PCDHB9-202ENST00000623266 IFNA17P01571 189 aa6.61□□□□□ -1.35
PCDHB9-202ENST00000623266 IFNA4P05014 189 aa6.61□□□□□ -1.35
PCDHB9-202ENST00000623266 PGAM2P15259 253 aa6.61□□□□□ -1.35
PCDHB9-202ENST00000623266 UCP1P25874 307 aa6.61□□□□□ -1.35
PCDHB9-202ENST00000623266 S100GP29377 79 aa6.61□□□□□ -1.35
PCDHB9-202ENST00000623266 CTF1Q16619 201 aa6.61□□□□□ -1.35
PCDHB9-202ENST00000623266 TIGITQ495A1 244 aa6.61□□□□□ -1.35
PCDHB9-202ENST00000623266 AARDQ4LEZ3 155 aa6.61□□□□□ -1.35
PCDHB9-202ENST00000623266 RNASE12Q5GAN4 147 aaKnown RBP6.61□□□□□ -1.35
PCDHB9-202ENST00000623266 TRPT1Q86TN4 253 aaKnown RBP6.61□□□□□ -1.35
PCDHB9-202ENST00000623266 OR4X1Q8NH49 305 aa6.61□□□□□ -1.35
PCDHB9-202ENST00000623266 LHFPL5Q8TAF8 219 aa6.61□□□□□ -1.35
PCDHB9-202ENST00000623266 DCANP1Q8TF63 244 aa6.61□□□□□ -1.35
PCDHB9-202ENST00000623266 TMEM170AQ8WVE7 144 aa6.61□□□□□ -1.35
PCDHB9-202ENST00000623266 RTBDNQ9BSG5 229 aaPredicted RBP6.61□□□□□ -1.35
PCDHB9-202ENST00000623266 MIXL1Q9H2W2 232 aa6.61□□□□□ -1.35
PCDHB9-202ENST00000623266 DYNC1H1Q14204 4646 aaKnown RBP6.61□□□□□ -1.35
PCDHB9-202ENST00000623266 ELOA3CA0A087WX78 387 aaPredicted RBP6.6□□□□□ -1.35
PCDHB9-202ENST00000623266 KNCNA6PVL3 124 aa6.6□□□□□ -1.35
PCDHB9-202ENST00000623266 ZNF705EA8MWA4 302 aaPredicted RBP6.6□□□□□ -1.35
PCDHB9-202ENST00000623266 NXPH3O95157 252 aa6.6□□□□□ -1.35
PCDHB9-202ENST00000623266 CDS2O95674 445 aa6.6□□□□□ -1.35
PCDHB9-202ENST00000623266 CD74P04233 296 aa6.6□□□□□ -1.35
PCDHB9-202ENST00000623266 RORCP51449 518 aa6.6□□□□□ -1.35
PCDHB9-202ENST00000623266 SUB1P53999 127 aaKnown RBP eCLIP6.6□□□□□ -1.35
PCDHB9-202ENST00000623266 RPL11P62913 178 aaKnown RBP6.6□□□□□ -1.35
PCDHB9-202ENST00000623266 SELENOHQ8IZQ5 122 aaKnown RBP6.6□□□□□ -1.35
PCDHB9-202ENST00000623266 TMEM229BQ8NBD8 167 aa6.6□□□□□ -1.35
PCDHB9-202ENST00000623266 MARCH1Q8TCQ1 289 aa6.6□□□□□ -1.35
PCDHB9-202ENST00000623266 C2CD4CQ8TF44 421 aa6.6□□□□□ -1.35
PCDHB9-202ENST00000623266 X6R8D5 127 aa6.6□□□□□ -1.35
PCDHB9-202ENST00000623266 IGHV4-28A0A0C4DH34 117 aa6.59□□□□□ -1.35
PCDHB9-202ENST00000623266 A0A1W2PS18 150 aa6.59□□□□□ -1.35
PCDHB9-202ENST00000623266 FAM25AB3EWG3 89 aa6.59□□□□□ -1.35
PCDHB9-202ENST00000623266 FAM25CB3EWG5 89 aa6.59□□□□□ -1.35
PCDHB9-202ENST00000623266 FAM25GB3EWG6 89 aa6.59□□□□□ -1.35
PCDHB9-202ENST00000623266 IGLL5B9A064 214 aa6.59□□□□□ -1.35
PCDHB9-202ENST00000623266 TNFAIP8O95379 198 aa6.59□□□□□ -1.35
PCDHB9-202ENST00000623266 C4BPBP20851 252 aa6.59□□□□□ -1.35
PCDHB9-202ENST00000623266 P2RY1P47900 373 aa6.59□□□□□ -1.35
PCDHB9-202ENST00000623266 SPCS3P61009 180 aa6.59□□□□□ -1.35
PCDHB9-202ENST00000623266 RNASE10Q5GAN6 216 aaKnown RBP6.59□□□□□ -1.35
PCDHB9-202ENST00000623266 PRSS54Q6PEW0 395 aa6.59□□□□□ -1.35
PCDHB9-202ENST00000623266 C16orf54Q6UWD8 224 aa6.59□□□□□ -1.35
PCDHB9-202ENST00000623266 STHQ8IWL8 128 aa6.59□□□□□ -1.35
PCDHB9-202ENST00000623266 ARRDC1Q8N5I2 433 aa6.59□□□□□ -1.35
PCDHB9-202ENST00000623266 SLC35G3Q8N808 338 aa6.59□□□□□ -1.35
PCDHB9-202ENST00000623266 OR13C8Q8NGS7 320 aa6.59□□□□□ -1.35
PCDHB9-202ENST00000623266 OR52E5Q8NH55 327 aa6.59□□□□□ -1.35
PCDHB9-202ENST00000623266 ZFAND1Q8TCF1 268 aa6.59□□□□□ -1.35
PCDHB9-202ENST00000623266 TMEM230Q96A57 120 aa6.59□□□□□ -1.35
PCDHB9-202ENST00000623266 GPR146Q96CH1 333 aa6.59□□□□□ -1.35
PCDHB9-202ENST00000623266 GRAMD2BQ96HH9 432 aa6.59□□□□□ -1.35
PCDHB9-202ENST00000623266 RAB40CQ96S21 281 aa6.59□□□□□ -1.35
PCDHB9-202ENST00000623266 MFFQ9GZY8 342 aa6.59□□□□□ -1.35
PCDHB9-202ENST00000623266 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.59□□□□□ -1.35
PCDHB9-202ENST00000623266 CLEC5AQ9NY25 188 aa6.59□□□□□ -1.35
PCDHB9-202ENST00000623266 EXTL2Q9UBQ6 330 aa6.59□□□□□ -1.35
PCDHB9-202ENST00000623266 RABAC1Q9UI14 185 aa6.59□□□□□ -1.35
PCDHB9-202ENST00000623266 GPR132Q9UNW8 380 aa6.59□□□□□ -1.35
PCDHB9-202ENST00000623266 TEX13DA0A0J9YY54 714 aaPredicted RBP6.58□□□□□ -1.36
PCDHB9-202ENST00000623266 CORTO00230 105 aa6.58□□□□□ -1.36
PCDHB9-202ENST00000623266 CTDSP2O14595 271 aa6.58□□□□□ -1.36
PCDHB9-202ENST00000623266 OR5AC1P0C628 307 aa6.58□□□□□ -1.36
PCDHB9-202ENST00000623266 ZNF688P0C7X2 276 aa6.58□□□□□ -1.36
PCDHB9-202ENST00000623266 IGLC1P0CG04 106 aa6.58□□□□□ -1.36
PCDHB9-202ENST00000623266 ZNF182P17025 639 aaPredicted RBP6.58□□□□□ -1.36
PCDHB9-202ENST00000623266 HLA-DMBP28068 263 aa6.58□□□□□ -1.36
PCDHB9-202ENST00000623266 OPRK1P41145 380 aa6.58□□□□□ -1.36
PCDHB9-202ENST00000623266 AKR1C2P52895 323 aa6.58□□□□□ -1.36
PCDHB9-202ENST00000623266 TCTAP57738 103 aa6.58□□□□□ -1.36
PCDHB9-202ENST00000623266 DHODHQ02127 395 aa6.58□□□□□ -1.36
PCDHB9-202ENST00000623266 MEF2DQ14814 521 aa6.58□□□□□ -1.36
PCDHB9-202ENST00000623266 TRIM16LQ309B1 348 aa6.58□□□□□ -1.36
PCDHB9-202ENST00000623266 STEAP1BQ6NZ63 245 aa6.58□□□□□ -1.36
PCDHB9-202ENST00000623266 MZT2AQ6P582 158 aa6.58□□□□□ -1.36
PCDHB9-202ENST00000623266 STXBP6Q8NFX7 210 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms