RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 TRAPPC2LH3BP13 241 aa2.1□□□□□ -2.07
CPNE3-213ENST00000622183 S1PR2O95136 353 aa2.1□□□□□ -2.07
CPNE3-213ENST00000622183 C8GP07360 202 aa2.1□□□□□ -2.07
CPNE3-213ENST00000622183 UCHL1P09936 223 aa2.1□□□□□ -2.07
CPNE3-213ENST00000622183 TRAPPC2P0DI81 140 aa2.1□□□□□ -2.07
CPNE3-213ENST00000622183 TRAPPC2BP0DI82 140 aa2.1□□□□□ -2.07
CPNE3-213ENST00000622183 HIST1H1BP16401 226 aaKnown RBP2.1□□□□□ -2.07
CPNE3-213ENST00000622183 HIST1H1TP22492 207 aaPredicted RBP2.1□□□□□ -2.07
CPNE3-213ENST00000622183 MAP2K4P45985 399 aa2.1□□□□□ -2.07
CPNE3-213ENST00000622183 TAS2R20P59543 309 aa2.1□□□□□ -2.07
CPNE3-213ENST00000622183 TNFAIP6P98066 277 aaPredicted RBP2.1□□□□□ -2.07
CPNE3-213ENST00000622183 EDDM3AQ14507 147 aa2.1□□□□□ -2.07
CPNE3-213ENST00000622183 HIST3H3Q16695 136 aa2.1□□□□□ -2.07
CPNE3-213ENST00000622183 LRRC75BQ2VPJ9 315 aa2.1□□□□□ -2.07
CPNE3-213ENST00000622183 TMEM78Q5T7P6 136 aa2.1□□□□□ -2.07
CPNE3-213ENST00000622183 C9orf62Q8N4C0 152 aa2.1□□□□□ -2.07
CPNE3-213ENST00000622183 ZNF283Q8N7M2 679 aa2.1□□□□□ -2.07
CPNE3-213ENST00000622183 OR13C8Q8NGS7 320 aa2.1□□□□□ -2.07
CPNE3-213ENST00000622183 NMNAT3Q96T66 252 aa2.1□□□□□ -2.07
CPNE3-213ENST00000622183 CXorf21Q9HAI6 301 aa2.1□□□□□ -2.07
CPNE3-213ENST00000622183 NIT2Q9NQR4 276 aa2.1□□□□□ -2.07
CPNE3-213ENST00000622183 GPR84Q9NQS5 396 aa2.1□□□□□ -2.07
CPNE3-213ENST00000622183 SPANXCQ9NY87 97 aa2.1□□□□□ -2.07
CPNE3-213ENST00000622183 METTL1Q9UBP6 276 aaKnown RBP2.1□□□□□ -2.07
CPNE3-213ENST00000622183 AK3Q9UIJ7 227 aa2.1□□□□□ -2.07
CPNE3-213ENST00000622183 SLC35A3Q9Y2D2 325 aa2.1□□□□□ -2.07
CPNE3-213ENST00000622183 LCTP09848 1927 aa2.1□□□□□ -2.07
CPNE3-213ENST00000622183 ATG2AQ2TAZ0 1938 aa2.1□□□□□ -2.07
CPNE3-213ENST00000622183 PLXND1Q9Y4D7 1925 aa2.1□□□□□ -2.07
CPNE3-213ENST00000622183 EPRSP07814 1512 aaKnown RBP2.1□□□□□ -2.07
CPNE3-213ENST00000622183 A0A1B0GUL6 1792 aa2.1□□□□□ -2.07
CPNE3-213ENST00000622183 CHD2O14647 1828 aaKnown RBP2.1□□□□□ -2.07
CPNE3-213ENST00000622183 KTN1Q86UP2 1357 aaKnown RBP2.1□□□□□ -2.07
CPNE3-213ENST00000622183 CACNA1GO43497 2377 aa2.09□□□□□ -2.07
CPNE3-213ENST00000622183 GOLGA3Q08378 1498 aa2.09□□□□□ -2.07
CPNE3-213ENST00000622183 ADGRB3O60242 1522 aa2.09□□□□□ -2.07
CPNE3-213ENST00000622183 DISP1Q96F81 1524 aa2.09□□□□□ -2.07
CPNE3-213ENST00000622183 FAAHO00519 579 aa2.09□□□□□ -2.07
CPNE3-213ENST00000622183 CYB5BO43169 146 aa2.09□□□□□ -2.07
CPNE3-213ENST00000622183 ORC5O43913 435 aa2.09□□□□□ -2.07
CPNE3-213ENST00000622183 CNIH1O95406 144 aa2.09□□□□□ -2.07
CPNE3-213ENST00000622183 IFNA1P01562 189 aa2.09□□□□□ -2.07
CPNE3-213ENST00000622183 CD79AP11912 226 aa2.09□□□□□ -2.07
CPNE3-213ENST00000622183 SULT1A1P50225 295 aa2.09□□□□□ -2.07
CPNE3-213ENST00000622183 PKIAP61925 76 aa2.09□□□□□ -2.07
CPNE3-213ENST00000622183 GNG3P63215 75 aa2.09□□□□□ -2.07
CPNE3-213ENST00000622183 HSD17B12Q53GQ0 312 aa2.09□□□□□ -2.07
CPNE3-213ENST00000622183 AGTRAPQ6RW13 159 aa2.09□□□□□ -2.07
CPNE3-213ENST00000622183 SLC35F6Q8N357 371 aa2.09□□□□□ -2.07
CPNE3-213ENST00000622183 SLC22A24Q8N4F4 322 aa2.09□□□□□ -2.07
CPNE3-213ENST00000622183 DEFB125Q8N687 156 aa2.09□□□□□ -2.07
CPNE3-213ENST00000622183 ACBD7Q8N6N7 88 aa2.09□□□□□ -2.07
CPNE3-213ENST00000622183 Q8NDZ9 215 aa2.09□□□□□ -2.07
CPNE3-213ENST00000622183 OR9Q1Q8NGQ5 310 aa2.09□□□□□ -2.07
CPNE3-213ENST00000622183 OR4X1Q8NH49 305 aa2.09□□□□□ -2.07
CPNE3-213ENST00000622183 OR4C6Q8NH72 309 aa2.09□□□□□ -2.07
CPNE3-213ENST00000622183 SGMS2Q8NHU3 365 aa2.09□□□□□ -2.07
CPNE3-213ENST00000622183 MRPS24Q96EL2 167 aaKnown RBP2.09□□□□□ -2.07
CPNE3-213ENST00000622183 IMP4Q96G21 291 aaKnown RBP2.09□□□□□ -2.07
CPNE3-213ENST00000622183 PDCD10Q9BUL8 212 aa2.09□□□□□ -2.07
CPNE3-213ENST00000622183 TTTY12Q9BZ98 90 aa2.09□□□□□ -2.07
CPNE3-213ENST00000622183 DCSTAMPQ9H295 470 aa2.09□□□□□ -2.07
CPNE3-213ENST00000622183 TAAR3PQ9P1P4 343 aa2.09□□□□□ -2.07
CPNE3-213ENST00000622183 VPS29Q9UBQ0 182 aa2.09□□□□□ -2.07
CPNE3-213ENST00000622183 RSL24D1Q9UHA3 163 aaKnown RBP2.09□□□□□ -2.07
CPNE3-213ENST00000622183 TMEM2Q9UHN6 1383 aa2.09□□□□□ -2.08
CPNE3-213ENST00000622183 MYH4Q9Y623 1939 aa2.09□□□□□ -2.08
CPNE3-213ENST00000622183 PIK3C2GO75747 1445 aa2.08□□□□□ -2.08
CPNE3-213ENST00000622183 DAPK1P53355 1430 aa2.08□□□□□ -2.08
CPNE3-213ENST00000622183 KNDC1Q76NI1 1749 aa2.08□□□□□ -2.08
CPNE3-213ENST00000622183 MLH3Q9UHC1 1453 aa2.08□□□□□ -2.08
CPNE3-213ENST00000622183 CDK13Q14004 1512 aaKnown RBP2.08□□□□□ -2.08
CPNE3-213ENST00000622183 ARL5CA6NH57 179 aa2.08□□□□□ -2.08
CPNE3-213ENST00000622183 CLDN24A6NM45 220 aa2.08□□□□□ -2.08
CPNE3-213ENST00000622183 K7ERU9 68 aa2.08□□□□□ -2.08
CPNE3-213ENST00000622183 P0DMU3 169 aa2.08□□□□□ -2.08
CPNE3-213ENST00000622183 FAM231AP0DMU4 169 aa2.08□□□□□ -2.08
CPNE3-213ENST00000622183 FAM231CP0DMU5 169 aa2.08□□□□□ -2.08
CPNE3-213ENST00000622183 ZNF25P17030 456 aaPredicted RBP2.08□□□□□ -2.08
CPNE3-213ENST00000622183 RPL35P42766 123 aaKnown RBP2.08□□□□□ -2.08
CPNE3-213ENST00000622183 FXYD7P58549 80 aa2.08□□□□□ -2.08
CPNE3-213ENST00000622183 TAS2R41P59536 307 aa2.08□□□□□ -2.08
CPNE3-213ENST00000622183 KRTAP12-3P60328 96 aa2.08□□□□□ -2.08
CPNE3-213ENST00000622183 FABP9Q0Z7S8 132 aa2.08□□□□□ -2.08
CPNE3-213ENST00000622183 HES1Q14469 280 aa2.08□□□□□ -2.08
CPNE3-213ENST00000622183 FAM201AQ5SY85 155 aa2.08□□□□□ -2.08
CPNE3-213ENST00000622183 C1orf158Q8N1D5 194 aa2.08□□□□□ -2.08
CPNE3-213ENST00000622183 SLC30A7Q8NEW0 376 aa2.08□□□□□ -2.08
CPNE3-213ENST00000622183 OR13C4Q8NGS5 318 aa2.08□□□□□ -2.08
CPNE3-213ENST00000622183 ZNF675Q8TD23 568 aa2.08□□□□□ -2.08
CPNE3-213ENST00000622183 ACOT12Q8WYK0 555 aa2.08□□□□□ -2.08
CPNE3-213ENST00000622183 GINS3Q9BRX5 216 aa2.08□□□□□ -2.08
CPNE3-213ENST00000622183 TTTY13Q9BZ97 58 aa2.08□□□□□ -2.08
CPNE3-213ENST00000622183 RNF122Q9H9V4 155 aa2.08□□□□□ -2.08
CPNE3-213ENST00000622183 NDUFB11Q9NX14 153 aa2.08□□□□□ -2.08
CPNE3-213ENST00000622183 CALML5Q9NZT1 146 aa2.08□□□□□ -2.08
CPNE3-213ENST00000622183 SCP2D1Q9UJQ7 156 aa2.08□□□□□ -2.08
CPNE3-213ENST00000622183 ZFP30Q9Y2G7 519 aa2.08□□□□□ -2.08
CPNE3-213ENST00000622183 UFC1Q9Y3C8 167 aa2.08□□□□□ -2.08
CPNE3-213ENST00000622183 COL24A1Q17RW2 1714 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms