RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 ZNF407Q9C0G0 2248 aa6.17□□□□□ -1.42
TRIM49B-202ENST00000622138 SMAD7O15105 426 aaKnown RBP6.17□□□□□ -1.42
TRIM49B-202ENST00000622138 FCGR2BP31994 310 aaPredicted RBP6.17□□□□□ -1.42
TRIM49B-202ENST00000622138 PLA2G5P39877 138 aa6.17□□□□□ -1.42
TRIM49B-202ENST00000622138 OPRK1P41145 380 aa6.17□□□□□ -1.42
TRIM49B-202ENST00000622138 IZUMO4Q1ZYL8 232 aa6.17□□□□□ -1.42
TRIM49B-202ENST00000622138 AAED1Q7RTV5 226 aa6.17□□□□□ -1.42
TRIM49B-202ENST00000622138 ZNF611Q8N823 705 aa6.17□□□□□ -1.42
TRIM49B-202ENST00000622138 NHLRC2Q8NBF2 726 aa6.17□□□□□ -1.42
TRIM49B-202ENST00000622138 OR51H1Q8NH63 302 aa6.17□□□□□ -1.42
TRIM49B-202ENST00000622138 FOXB1Q99853 325 aa6.17□□□□□ -1.42
TRIM49B-202ENST00000622138 MTCH1Q9NZJ7 389 aa6.17□□□□□ -1.42
TRIM49B-202ENST00000622138 RALYQ9UKM9 306 aaKnown RBP6.17□□□□□ -1.42
TRIM49B-202ENST00000622138 UFC1Q9Y3C8 167 aa6.17□□□□□ -1.42
TRIM49B-202ENST00000622138 LOXL2Q9Y4K0 774 aa6.17□□□□□ -1.42
TRIM49B-202ENST00000622138 MED12LQ86YW9 2145 aa6.17□□□□□ -1.42
TRIM49B-202ENST00000622138 FREM1Q5H8C1 2179 aa6.17□□□□□ -1.42
TRIM49B-202ENST00000622138 IGKV1-6A0A0C4DH72 117 aa6.17□□□□□ -1.42
TRIM49B-202ENST00000622138 A0A1W2PRE2 83 aa6.17□□□□□ -1.42
TRIM49B-202ENST00000622138 PINLYPA6NC86 204 aa6.17□□□□□ -1.42
TRIM49B-202ENST00000622138 HSPB6O14558 160 aa6.17□□□□□ -1.42
TRIM49B-202ENST00000622138 NKX2-8O15522 239 aa6.17□□□□□ -1.42
TRIM49B-202ENST00000622138 CER1O95813 267 aa6.17□□□□□ -1.42
TRIM49B-202ENST00000622138 SCTP09683 121 aa6.17□□□□□ -1.42
TRIM49B-202ENST00000622138 DEFA4P12838 97 aa6.17□□□□□ -1.42
TRIM49B-202ENST00000622138 BCL3P20749 454 aa6.17□□□□□ -1.42
TRIM49B-202ENST00000622138 GCHFRP30047 84 aa6.17□□□□□ -1.42
TRIM49B-202ENST00000622138 RPL8P62917 257 aaKnown RBP6.17□□□□□ -1.42
TRIM49B-202ENST00000622138 SLC35B1P78383 322 aa6.17□□□□□ -1.42
TRIM49B-202ENST00000622138 Q0VFX4 171 aa6.17□□□□□ -1.42
TRIM49B-202ENST00000622138 WIPI1Q5MNZ9 446 aaPredicted RBP6.17□□□□□ -1.42
TRIM49B-202ENST00000622138 Q6ZS92 163 aa6.17□□□□□ -1.42
TRIM49B-202ENST00000622138 RPS19BP1Q86WX3 136 aaKnown RBP6.17□□□□□ -1.42
TRIM49B-202ENST00000622138 C8orf46Q8TAG6 207 aa6.17□□□□□ -1.42
TRIM49B-202ENST00000622138 GTSF1Q8WW33 167 aa6.17□□□□□ -1.42
TRIM49B-202ENST00000622138 RAB1BQ9H0U4 201 aa6.17□□□□□ -1.42
TRIM49B-202ENST00000622138 RNASE7Q9H1E1 156 aaKnown RBP6.17□□□□□ -1.42
TRIM49B-202ENST00000622138 DEPPQ9NTK1 212 aa6.17□□□□□ -1.42
TRIM49B-202ENST00000622138 SELENOKQ9Y6D0 94 aa6.17□□□□□ -1.42
TRIM49B-202ENST00000622138 R4GN57 208 aa6.17□□□□□ -1.42
TRIM49B-202ENST00000622138 B5MCH6 92 aa6.16□□□□□ -1.42
TRIM49B-202ENST00000622138 TAS2R45P59539 299 aa6.16□□□□□ -1.42
TRIM49B-202ENST00000622138 FXYD3Q14802 87 aa6.16□□□□□ -1.42
TRIM49B-202ENST00000622138 PDLIM3Q53GG5 364 aaPredicted RBP6.16□□□□□ -1.42
TRIM49B-202ENST00000622138 Q6ZUT4 128 aa6.16□□□□□ -1.42
TRIM49B-202ENST00000622138 FAM231DQ6ZW35 169 aa6.16□□□□□ -1.42
TRIM49B-202ENST00000622138 CITED2Q99967 270 aaPredicted RBP6.16□□□□□ -1.42
TRIM49B-202ENST00000622138 C1QTNF4Q9BXJ3 329 aa6.16□□□□□ -1.42
TRIM49B-202ENST00000622138 CDIP1Q9H305 208 aa6.16□□□□□ -1.42
TRIM49B-202ENST00000622138 VCX2Q9H322 139 aa6.16□□□□□ -1.42
TRIM49B-202ENST00000622138 PRDM6Q9NQX0 595 aa6.16□□□□□ -1.42
TRIM49B-202ENST00000622138 ATP23Q9Y6H3 246 aa6.16□□□□□ -1.42
TRIM49B-202ENST00000622138 TNRC6BQ9UPQ9 1833 aaKnown RBP6.16□□□□□ -1.42
TRIM49B-202ENST00000622138 ZNF503-AS2A6NEH8 195 aa6.16□□□□□ -1.42
TRIM49B-202ENST00000622138 CXCL12P48061 93 aa6.16□□□□□ -1.42
TRIM49B-202ENST00000622138 FOXG1P55316 489 aaPredicted RBP6.16□□□□□ -1.42
TRIM49B-202ENST00000622138 ATP5G2Q06055 141 aa6.16□□□□□ -1.42
TRIM49B-202ENST00000622138 PQLC2Q6ZP29 291 aa6.16□□□□□ -1.42
TRIM49B-202ENST00000622138 LINC00173Q6ZV60 143 aa6.16□□□□□ -1.42
TRIM49B-202ENST00000622138 SSX8Q7RTT4 187 aa6.16□□□□□ -1.42
TRIM49B-202ENST00000622138 TEX50A0A1B0GTY4 177 aa6.15□□□□□ -1.43
TRIM49B-202ENST00000622138 NPIPB11E5RHQ5 1161 aa6.15□□□□□ -1.43
TRIM49B-202ENST00000622138 RRHO14718 337 aa6.15□□□□□ -1.43
TRIM49B-202ENST00000622138 NEURL1O76050 574 aa6.15□□□□□ -1.43
TRIM49B-202ENST00000622138 MFAP2P55001 183 aa6.15□□□□□ -1.43
TRIM49B-202ENST00000622138 ZXDAP98168 799 aa6.15□□□□□ -1.43
TRIM49B-202ENST00000622138 FOXE3Q13461 319 aa6.15□□□□□ -1.43
TRIM49B-202ENST00000622138 WFDC2Q14508 124 aa6.15□□□□□ -1.43
TRIM49B-202ENST00000622138 ETDBQ3ZM63 59 aa6.15□□□□□ -1.43
TRIM49B-202ENST00000622138 TDHQ8IZJ6 230 aa6.15□□□□□ -1.43
TRIM49B-202ENST00000622138 TRIB1Q96RU8 372 aa6.15□□□□□ -1.43
TRIM49B-202ENST00000622138 C1QTNF5Q9BXJ0 243 aa6.15□□□□□ -1.43
TRIM49B-202ENST00000622138 A0A096LPE4 126 aa6.14□□□□□ -1.43
TRIM49B-202ENST00000622138 TRBV6-6A0A0A6YYG2 114 aa6.14□□□□□ -1.43
TRIM49B-202ENST00000622138 A0A1B0GXF2 115 aa6.14□□□□□ -1.43
TRIM49B-202ENST00000622138 A0A1W2PPZ6 126 aa6.14□□□□□ -1.43
TRIM49B-202ENST00000622138 FBLL1A6NHQ2 334 aaKnown RBP6.14□□□□□ -1.43
TRIM49B-202ENST00000622138 SH2D7A6NKC9 451 aaPredicted RBP6.14□□□□□ -1.43
TRIM49B-202ENST00000622138 PATE3B3GLJ2 98 aa6.14□□□□□ -1.43
TRIM49B-202ENST00000622138 E9PLD3 99 aa6.14□□□□□ -1.43
TRIM49B-202ENST00000622138 DNPH1O43598 174 aa6.14□□□□□ -1.43
TRIM49B-202ENST00000622138 CLDN14O95500 239 aa6.14□□□□□ -1.43
TRIM49B-202ENST00000622138 P04436 131 aa6.14□□□□□ -1.43
TRIM49B-202ENST00000622138 VDAC2P45880 294 aaPredicted RBP6.14□□□□□ -1.43
TRIM49B-202ENST00000622138 IL11RAQ14626 422 aa6.14□□□□□ -1.43
TRIM49B-202ENST00000622138 RTL8BQ17RB0 113 aa6.14□□□□□ -1.43
TRIM49B-202ENST00000622138 GCSAMLQ5JQS6 135 aa6.14□□□□□ -1.43
TRIM49B-202ENST00000622138 GDF5OSQ5U4N7 250 aa6.14□□□□□ -1.43
TRIM49B-202ENST00000622138 C20orf204Q6ZNR8 217 aa6.14□□□□□ -1.43
TRIM49B-202ENST00000622138 PPP1R32Q7Z5V6 425 aa6.14□□□□□ -1.43
TRIM49B-202ENST00000622138 ARPC1AQ92747 370 aa6.14□□□□□ -1.43
TRIM49B-202ENST00000622138 IGF2BP2-AS1Q96M15 143 aa6.14□□□□□ -1.43
TRIM49B-202ENST00000622138 ZNF488Q96MN9 340 aa6.14□□□□□ -1.43
TRIM49B-202ENST00000622138 TM2D2Q9BX73 214 aa6.14□□□□□ -1.43
TRIM49B-202ENST00000622138 TMEM133Q9H2Q1 129 aa6.14□□□□□ -1.43
TRIM49B-202ENST00000622138 OR1A1Q9P1Q5 309 aa6.14□□□□□ -1.43
TRIM49B-202ENST00000622138 SOX21Q9Y651 276 aaPredicted RBP6.14□□□□□ -1.43
TRIM49B-202ENST00000622138 CELSR3Q9NYQ7 3312 aa6.14□□□□□ -1.43
TRIM49B-202ENST00000622138 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.14□□□□□ -1.43
TRIM49B-202ENST00000622138 IGLV2-8P01709 118 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms