RNA–Protein interactions for RNA: ENST00000622057.4

TARDBP-227, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-227ENST00000622057 ZFAND3Q9H8U3 227 aa6.8□□□□□ -1.32
TARDBP-227ENST00000622057 TRAV2A0A0B4J234 112 aa6.79□□□□□ -1.32
TARDBP-227ENST00000622057 C3orf85A0A1B0GTC6 90 aa6.79□□□□□ -1.32
TARDBP-227ENST00000622057 KNCNA6PVL3 124 aa6.79□□□□□ -1.32
TARDBP-227ENST00000622057 CORTO00230 105 aa6.79□□□□□ -1.32
TARDBP-227ENST00000622057 CLN5O75503 358 aa6.79□□□□□ -1.32
TARDBP-227ENST00000622057 ATG12O94817 140 aa6.79□□□□□ -1.32
TARDBP-227ENST00000622057 CD3DP04234 171 aa6.79□□□□□ -1.32
TARDBP-227ENST00000622057 RNASE2P10153 161 aaKnown RBP6.79□□□□□ -1.32
TARDBP-227ENST00000622057 RND3P61587 244 aa6.79□□□□□ -1.32
TARDBP-227ENST00000622057 PRR20EP86478 221 aa6.79□□□□□ -1.32
TARDBP-227ENST00000622057 PRR20CP86479 221 aa6.79□□□□□ -1.32
TARDBP-227ENST00000622057 PRR20DP86480 221 aa6.79□□□□□ -1.32
TARDBP-227ENST00000622057 PRR20BP86481 221 aa6.79□□□□□ -1.32
TARDBP-227ENST00000622057 PRR20AP86496 221 aa6.79□□□□□ -1.32
TARDBP-227ENST00000622057 RNASE10Q5GAN6 216 aaKnown RBP6.79□□□□□ -1.32
TARDBP-227ENST00000622057 RNASE11Q8TAA1 199 aaKnown RBP6.79□□□□□ -1.32
TARDBP-227ENST00000622057 RRNAD1Q96FB5 475 aaKnown RBP6.79□□□□□ -1.32
TARDBP-227ENST00000622057 ZNF486Q96H40 463 aaPredicted RBP6.79□□□□□ -1.32
TARDBP-227ENST00000622057 METTL26Q96S19 204 aa6.79□□□□□ -1.32
TARDBP-227ENST00000622057 MRPL36Q9P0J6 103 aaKnown RBP6.79□□□□□ -1.32
TARDBP-227ENST00000622057 COPZ2Q9P299 210 aa6.79□□□□□ -1.32
TARDBP-227ENST00000622057 KLK11Q9UBX7 282 aa6.79□□□□□ -1.32
TARDBP-227ENST00000622057 IGHV4-28A0A0C4DH34 117 aa6.78□□□□□ -1.32
TARDBP-227ENST00000622057 A0A0G2JRQ6 117 aa6.78□□□□□ -1.32
TARDBP-227ENST00000622057 INS-IGF2F8WCM5 200 aa6.78□□□□□ -1.32
TARDBP-227ENST00000622057 SCGB2A1O75556 95 aa6.78□□□□□ -1.32
TARDBP-227ENST00000622057 ZNF688P0C7X2 276 aa6.78□□□□□ -1.32
TARDBP-227ENST00000622057 RBMY1A1P0DJD3 496 aaKnown RBP6.78□□□□□ -1.32
TARDBP-227ENST00000622057 RBMY1CP0DJD4 496 aa6.78□□□□□ -1.32
TARDBP-227ENST00000622057 P2RY1P47900 373 aa6.78□□□□□ -1.32
TARDBP-227ENST00000622057 RORCP51449 518 aa6.78□□□□□ -1.32
TARDBP-227ENST00000622057 TCTAP57738 103 aa6.78□□□□□ -1.32
TARDBP-227ENST00000622057 RBMY1FQ15415 496 aaKnown RBP6.78□□□□□ -1.32
TARDBP-227ENST00000622057 TIGITQ495A1 244 aa6.78□□□□□ -1.32
TARDBP-227ENST00000622057 SCGB2B2Q4G0G5 96 aa6.78□□□□□ -1.32
TARDBP-227ENST00000622057 MORN3Q6PF18 240 aaPredicted RBP6.78□□□□□ -1.32
TARDBP-227ENST00000622057 LHFPL1Q86WI0 220 aa6.78□□□□□ -1.32
TARDBP-227ENST00000622057 CENPSQ8N2Z9 138 aa6.78□□□□□ -1.32
TARDBP-227ENST00000622057 OR4X1Q8NH49 305 aa6.78□□□□□ -1.32
TARDBP-227ENST00000622057 OR52I2Q8NH67 350 aa6.78□□□□□ -1.32
TARDBP-227ENST00000622057 NARS2Q96I59 477 aaKnown RBP6.78□□□□□ -1.32
TARDBP-227ENST00000622057 FUNDC2Q9BWH2 189 aa6.78□□□□□ -1.32
TARDBP-227ENST00000622057 FNDC4Q9H6D8 234 aaPredicted RBP6.78□□□□□ -1.32
TARDBP-227ENST00000622057 CLEC5AQ9NY25 188 aa6.78□□□□□ -1.32
TARDBP-227ENST00000622057 APLNQ9ULZ1 77 aa6.78□□□□□ -1.32
TARDBP-227ENST00000622057 HERC2O95714 4834 aa6.77□□□□□ -1.33
TARDBP-227ENST00000622057 TRAV30A0A087WSZ9 112 aa6.77□□□□□ -1.33
TARDBP-227ENST00000622057 C11orf94C9JXX5 98 aa6.77□□□□□ -1.33
TARDBP-227ENST00000622057 K7EQG2 157 aa6.77□□□□□ -1.33
TARDBP-227ENST00000622057 TNFAIP8O95379 198 aa6.77□□□□□ -1.33
TARDBP-227ENST00000622057 GIG44P09565 113 aaPredicted RBP6.77□□□□□ -1.33
TARDBP-227ENST00000622057 P0C879 139 aa6.77□□□□□ -1.33
TARDBP-227ENST00000622057 CRYBB3P26998 211 aa6.77□□□□□ -1.33
TARDBP-227ENST00000622057 HLA-DMBP28068 263 aa6.77□□□□□ -1.33
TARDBP-227ENST00000622057 DHRS2Q13268 280 aa6.77□□□□□ -1.33
TARDBP-227ENST00000622057 ACTL10Q5JWF8 245 aa6.77□□□□□ -1.33
TARDBP-227ENST00000622057 PVRIGQ6DKI7 326 aa6.77□□□□□ -1.33
TARDBP-227ENST00000622057 MZT2AQ6P582 158 aa6.77□□□□□ -1.33
TARDBP-227ENST00000622057 TRPT1Q86TN4 253 aaKnown RBP6.77□□□□□ -1.33
TARDBP-227ENST00000622057 ARRDC1Q8N5I2 433 aa6.77□□□□□ -1.33
TARDBP-227ENST00000622057 CCDC71LQ8N9Z2 235 aa6.77□□□□□ -1.33
TARDBP-227ENST00000622057 Q8NAQ8 132 aa6.77□□□□□ -1.33
TARDBP-227ENST00000622057 ZFAND1Q8TCF1 268 aa6.77□□□□□ -1.33
TARDBP-227ENST00000622057 Q8WTZ3 238 aa6.77□□□□□ -1.33
TARDBP-227ENST00000622057 EXTL2Q9UBQ6 330 aa6.77□□□□□ -1.33
TARDBP-227ENST00000622057 ELOA3CA0A087WX78 387 aaPredicted RBP6.76□□□□□ -1.33
TARDBP-227ENST00000622057 SPP1P10451 314 aa6.76□□□□□ -1.33
TARDBP-227ENST00000622057 MIFP14174 115 aa6.76□□□□□ -1.33
TARDBP-227ENST00000622057 C4BPBP20851 252 aa6.76□□□□□ -1.33
TARDBP-227ENST00000622057 RPL5P46777 297 aaKnown RBP6.76□□□□□ -1.33
TARDBP-227ENST00000622057 TMEM41BQ5BJD5 291 aa6.76□□□□□ -1.33
TARDBP-227ENST00000622057 Q6ZRM9 215 aa6.76□□□□□ -1.33
TARDBP-227ENST00000622057 Q6ZTC4 211 aa6.76□□□□□ -1.33
TARDBP-227ENST00000622057 OR4D10Q8NGI6 311 aa6.76□□□□□ -1.33
TARDBP-227ENST00000622057 OR13C8Q8NGS7 320 aa6.76□□□□□ -1.33
TARDBP-227ENST00000622057 TERB2Q8NHR7 220 aa6.76□□□□□ -1.33
TARDBP-227ENST00000622057 MARCH1Q8TCQ1 289 aa6.76□□□□□ -1.33
TARDBP-227ENST00000622057 GRAMD2BQ96HH9 432 aa6.76□□□□□ -1.33
TARDBP-227ENST00000622057 RAB40CQ96S21 281 aa6.76□□□□□ -1.33
TARDBP-227ENST00000622057 ABHD1Q96SE0 405 aa6.76□□□□□ -1.33
TARDBP-227ENST00000622057 HRH4Q9H3N8 390 aa6.76□□□□□ -1.33
TARDBP-227ENST00000622057 MTFP1Q9UDX5 166 aa6.76□□□□□ -1.33
TARDBP-227ENST00000622057 VPS13DQ5THJ4 4388 aa6.76□□□□□ -1.33
TARDBP-227ENST00000622057 IGHV4-4A0A075B6R2 117 aa6.75□□□□□ -1.33
TARDBP-227ENST00000622057 TRAV10A0A0B4J240 114 aa6.75□□□□□ -1.33
TARDBP-227ENST00000622057 TEX13DA0A0J9YY54 714 aaPredicted RBP6.75□□□□□ -1.33
TARDBP-227ENST00000622057 RPS10-NUDT3A0A1W2PQS6 291 aa6.75□□□□□ -1.33
TARDBP-227ENST00000622057 HELTA6NFD8 242 aa6.75□□□□□ -1.33
TARDBP-227ENST00000622057 ZNF705EA8MWA4 302 aaPredicted RBP6.75□□□□□ -1.33
TARDBP-227ENST00000622057 RAB3DO95716 219 aa6.75□□□□□ -1.33
TARDBP-227ENST00000622057 IGKV1-17P01599 117 aa6.75□□□□□ -1.33
TARDBP-227ENST00000622057 HNRNPCP07910 306 aaKnown RBP eCLIP6.75□□□□□ -1.33
TARDBP-227ENST00000622057 OR5AC1P0C628 307 aa6.75□□□□□ -1.33
TARDBP-227ENST00000622057 ZNF182P17025 639 aaPredicted RBP6.75□□□□□ -1.33
TARDBP-227ENST00000622057 UCP1P25874 307 aa6.75□□□□□ -1.33
TARDBP-227ENST00000622057 HTR2BP41595 481 aa6.75□□□□□ -1.33
TARDBP-227ENST00000622057 EIF2B2P49770 351 aaKnown RBP6.75□□□□□ -1.33
TARDBP-227ENST00000622057 SPCS3P61009 180 aa6.75□□□□□ -1.33
TARDBP-227ENST00000622057 DHODHQ02127 395 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms