RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 CYB5R2Q6BCY4 276 aa7.63□□□□□ -1.19
GGA3-223ENST00000621870 DPPA3Q6W0C5 159 aa7.63□□□□□ -1.19
GGA3-223ENST00000621870 CACNG8Q8WXS5 425 aa7.63□□□□□ -1.19
GGA3-223ENST00000621870 RCC1LQ96I51 464 aaKnown RBP7.63□□□□□ -1.19
GGA3-223ENST00000621870 TRAV34A0A0B4J273 112 aa7.62□□□□□ -1.19
GGA3-223ENST00000621870 A0A1W2PNU3 283 aaPredicted RBP7.62□□□□□ -1.19
GGA3-223ENST00000621870 GCHFRP30047 84 aa7.62□□□□□ -1.19
GGA3-223ENST00000621870 FAM3BP58499 235 aaPredicted RBP7.62□□□□□ -1.19
GGA3-223ENST00000621870 CD69Q07108 199 aa7.62□□□□□ -1.19
GGA3-223ENST00000621870 FHL1Q13642 323 aa7.62□□□□□ -1.19
GGA3-223ENST00000621870 STPG2Q8N412 459 aa7.62□□□□□ -1.19
GGA3-223ENST00000621870 COQ2Q96H96 371 aa7.62□□□□□ -1.19
GGA3-223ENST00000621870 C19orf24Q9BVV8 132 aa7.62□□□□□ -1.19
GGA3-223ENST00000621870 NPCDR1Q9BY65 106 aa7.62□□□□□ -1.19
GGA3-223ENST00000621870 PCDH15Q96QU1 1955 aa7.62□□□□□ -1.19
GGA3-223ENST00000621870 NPFFO15130 113 aa7.62□□□□□ -1.19
GGA3-223ENST00000621870 RBFOX2O43251 390 aaKnown RBP eCLIP7.62□□□□□ -1.19
GGA3-223ENST00000621870 PCP4P48539 62 aa7.62□□□□□ -1.19
GGA3-223ENST00000621870 DLX1P56177 255 aa7.62□□□□□ -1.19
GGA3-223ENST00000621870 LINC00205P59089 165 aa7.62□□□□□ -1.19
GGA3-223ENST00000621870 PSG9Q00887 426 aa7.62□□□□□ -1.19
GGA3-223ENST00000621870 ZNF324BQ6AW86 544 aaPredicted RBP7.62□□□□□ -1.19
GGA3-223ENST00000621870 FAM169BQ8N8A8 192 aa7.62□□□□□ -1.19
GGA3-223ENST00000621870 HS3ST6Q96QI5 342 aa7.62□□□□□ -1.19
GGA3-223ENST00000621870 C15orf61A6NNL5 157 aa7.62□□□□□ -1.19
GGA3-223ENST00000621870 ANOS1P23352 680 aa7.62□□□□□ -1.19
GGA3-223ENST00000621870 SAA4P35542 130 aa7.62□□□□□ -1.19
GGA3-223ENST00000621870 COX19Q49B96 90 aa7.62□□□□□ -1.19
GGA3-223ENST00000621870 LEMD1Q68G75 181 aa7.62□□□□□ -1.19
GGA3-223ENST00000621870 ZNF841Q6ZN19 808 aa7.62□□□□□ -1.19
GGA3-223ENST00000621870 TEX45Q8NA69 505 aa7.62□□□□□ -1.19
GGA3-223ENST00000621870 OR52E5Q8NH55 327 aa7.62□□□□□ -1.19
GGA3-223ENST00000621870 RNASEH2CQ8TDP1 164 aaKnown RBP7.62□□□□□ -1.19
GGA3-223ENST00000621870 Q96MF0 132 aa7.62□□□□□ -1.19
GGA3-223ENST00000621870 GAFA1Q96PS6 74 aa7.62□□□□□ -1.19
GGA3-223ENST00000621870 MOB4Q9Y3A3 225 aa7.62□□□□□ -1.19
GGA3-223ENST00000621870 IGHV1-3A0A0C4DH29 117 aa7.62□□□□□ -1.19
GGA3-223ENST00000621870 B4DEV8 164 aa7.62□□□□□ -1.19
GGA3-223ENST00000621870 NAPSAO96009 420 aa7.62□□□□□ -1.19
GGA3-223ENST00000621870 CGAP01215 116 aa7.62□□□□□ -1.19
GGA3-223ENST00000621870 MSMBP08118 114 aa7.62□□□□□ -1.19
GGA3-223ENST00000621870 BTCP35070 178 aa7.62□□□□□ -1.19
GGA3-223ENST00000621870 SNRPEP62304 92 aaKnown RBP7.62□□□□□ -1.19
GGA3-223ENST00000621870 Q1RN00 199 aa7.62□□□□□ -1.19
GGA3-223ENST00000621870 Q6ZN92 141 aa7.62□□□□□ -1.19
GGA3-223ENST00000621870 ZNF600Q6ZNG1 722 aa7.62□□□□□ -1.19
GGA3-223ENST00000621870 TMEM144Q7Z5S9 345 aa7.62□□□□□ -1.19
GGA3-223ENST00000621870 M0R2Z0 102 aa7.61□□□□□ -1.19
GGA3-223ENST00000621870 RNF212Q495C1 297 aa7.61□□□□□ -1.19
GGA3-223ENST00000621870 FAM209BQ5JX69 171 aa7.61□□□□□ -1.19
GGA3-223ENST00000621870 AMMECR1LQ6DCA0 310 aa7.61□□□□□ -1.19
GGA3-223ENST00000621870 GLMPQ8WWB7 406 aa7.61□□□□□ -1.19
GGA3-223ENST00000621870 FRMPD3Q5JV73 1810 aa7.61□□□□□ -1.19
GGA3-223ENST00000621870 TRAV41A0A0B4J266 112 aa7.61□□□□□ -1.19
GGA3-223ENST00000621870 MYOD1P15172 320 aa7.61□□□□□ -1.19
GGA3-223ENST00000621870 C2orf83Q53S99 150 aa7.61□□□□□ -1.19
GGA3-223ENST00000621870 TPTE2P1Q5T6R2 138 aa7.61□□□□□ -1.19
GGA3-223ENST00000621870 FOXL2NBQ6ZUU3 175 aa7.61□□□□□ -1.19
GGA3-223ENST00000621870 RARRES2Q99969 163 aa7.61□□□□□ -1.19
GGA3-223ENST00000621870 MRPL32Q9BYC8 188 aaKnown RBP7.61□□□□□ -1.19
GGA3-223ENST00000621870 XIRP2A4UGR9 3374 aa7.61□□□□□ -1.19
GGA3-223ENST00000621870 TRIOO75962 3097 aa7.61□□□□□ -1.19
GGA3-223ENST00000621870 PSMB11A5LHX3 300 aa7.61□□□□□ -1.19
GGA3-223ENST00000621870 ZNF503-AS2A6NEH8 195 aa7.61□□□□□ -1.19
GGA3-223ENST00000621870 CKS2P33552 79 aa7.61□□□□□ -1.19
GGA3-223ENST00000621870 Q6ZR03 302 aa7.61□□□□□ -1.19
GGA3-223ENST00000621870 LINC01356Q8N9X3 169 aa7.61□□□□□ -1.19
GGA3-223ENST00000621870 SYT8Q8NBV8 401 aa7.61□□□□□ -1.19
GGA3-223ENST00000621870 PGLYRP4Q96LB8 373 aa7.61□□□□□ -1.19
GGA3-223ENST00000621870 PRB4P10163 310 aaPredicted RBP7.6□□□□□ -1.19
GGA3-223ENST00000621870 PRTN3P24158 256 aa7.6□□□□□ -1.19
GGA3-223ENST00000621870 C15orf32Q32M92 178 aa7.6□□□□□ -1.19
GGA3-223ENST00000621870 IGKV3OR2-268A0A0C4DH90 116 aa7.6□□□□□ -1.19
GGA3-223ENST00000621870 MUC21A0A0G2JKD1 596 aa7.6□□□□□ -1.19
GGA3-223ENST00000621870 MUC21A0A140T8X8 626 aa7.6□□□□□ -1.19
GGA3-223ENST00000621870 M0R381 172 aa7.6□□□□□ -1.19
GGA3-223ENST00000621870 CD8AP01732 235 aa7.6□□□□□ -1.19
GGA3-223ENST00000621870 CD33P20138 364 aa7.6□□□□□ -1.19
GGA3-223ENST00000621870 MUC21Q5SSG8 566 aa7.6□□□□□ -1.19
GGA3-223ENST00000621870 MINOS1Q5TGZ0 78 aa7.6□□□□□ -1.19
GGA3-223ENST00000621870 KLHDC1Q8N7A1 406 aa7.6□□□□□ -1.19
GGA3-223ENST00000621870 RNF125Q96EQ8 232 aa7.6□□□□□ -1.19
GGA3-223ENST00000621870 PSMG3Q9BT73 122 aaPredicted RBP7.6□□□□□ -1.19
GGA3-223ENST00000621870 ZNRD1Q9P1U0 126 aa7.6□□□□□ -1.19
GGA3-223ENST00000621870 PEMTQ9UBM1 199 aa7.6□□□□□ -1.19
GGA3-223ENST00000621870 MINOS1-NBL1R4GNA1 71 aa7.6□□□□□ -1.19
GGA3-223ENST00000621870 NCOA6Q14686 2063 aaPredicted RBP7.6□□□□□ -1.19
GGA3-223ENST00000621870 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.6□□□□□ -1.19
GGA3-223ENST00000621870 CEACAM4O75871 244 aa7.6□□□□□ -1.19
GGA3-223ENST00000621870 MPZP25189 248 aa7.6□□□□□ -1.19
GGA3-223ENST00000621870 PRSS8Q16651 343 aa7.6□□□□□ -1.19
GGA3-223ENST00000621870 TMEM155Q4W5P6 130 aa7.6□□□□□ -1.19
GGA3-223ENST00000621870 LDLRAD2Q5SZI1 272 aa7.6□□□□□ -1.19
GGA3-223ENST00000621870 C3orf56Q8N813 242 aa7.6□□□□□ -1.19
GGA3-223ENST00000621870 OR8A1Q8NGG7 326 aa7.6□□□□□ -1.19
GGA3-223ENST00000621870 NEU1Q99519 415 aa7.6□□□□□ -1.19
GGA3-223ENST00000621870 PARLQ9H300 379 aa7.6□□□□□ -1.19
GGA3-223ENST00000621870 SMDT1Q9H4I9 107 aa7.6□□□□□ -1.19
GGA3-223ENST00000621870 BEX4Q9NWD9 120 aaPredicted RBP7.6□□□□□ -1.19
GGA3-223ENST00000621870 C2orf16Q68DN1 1984 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms