RNA–Protein interactions for RNA: ENST00000621325.1

LIME1-210, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 2,410 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-210ENST00000621325 PRR20DP86480 221 aa17.13■□□□□ 0.33
LIME1-210ENST00000621325 PRR20BP86481 221 aa17.13■□□□□ 0.33
LIME1-210ENST00000621325 PRR20AP86496 221 aa17.13■□□□□ 0.33
LIME1-210ENST00000621325 LY6G5BQ8NDX9 201 aa17.13■□□□□ 0.33
LIME1-210ENST00000621325 TIMD4Q96H15 378 aa17.13■□□□□ 0.33
LIME1-210ENST00000621325 AKAP6Q13023 2319 aa17.13■□□□□ 0.33
LIME1-210ENST00000621325 IGHV1-3A0A0C4DH29 117 aa17.12■□□□□ 0.33
LIME1-210ENST00000621325 LINC00869P0C866 280 aa17.12■□□□□ 0.33
LIME1-210ENST00000621325 ERVFC1-1P60608 527 aa17.12■□□□□ 0.33
LIME1-210ENST00000621325 VMA21Q3ZAQ7 101 aa17.12■□□□□ 0.33
LIME1-210ENST00000621325 LDLRAD2Q5SZI1 272 aa17.12■□□□□ 0.33
LIME1-210ENST00000621325 RNASEH2CQ8TDP1 164 aaKnown RBP17.12■□□□□ 0.33
LIME1-210ENST00000621325 FNDC10F2Z333 226 aa17.12■□□□□ 0.33
LIME1-210ENST00000621325 STAG3L2P0CL84 134 aa17.12■□□□□ 0.33
LIME1-210ENST00000621325 STAG3L3P0CL85 134 aa17.12■□□□□ 0.33
LIME1-210ENST00000621325 ARF6P62330 175 aa17.12■□□□□ 0.33
LIME1-210ENST00000621325 ERHP84090 104 aaKnown RBP17.12■□□□□ 0.33
LIME1-210ENST00000621325 RAB31Q13636 194 aa17.12■□□□□ 0.33
LIME1-210ENST00000621325 TMEM144Q7Z5S9 345 aa17.12■□□□□ 0.33
LIME1-210ENST00000621325 DTX2Q86UW9 622 aa17.12■□□□□ 0.33
LIME1-210ENST00000621325 NEU4Q8WWR8 484 aaPredicted RBP17.12■□□□□ 0.33
LIME1-210ENST00000621325 SLC45A2Q9UMX9 530 aa17.12■□□□□ 0.33
LIME1-210ENST00000621325 INSIG2Q9Y5U4 225 aa17.12■□□□□ 0.33
LIME1-210ENST00000621325 C11orf94C9JXX5 98 aa17.11■□□□□ 0.33
LIME1-210ENST00000621325 C19orf84I3L1E1 186 aa17.11■□□□□ 0.33
LIME1-210ENST00000621325 LIPFP07098 398 aa17.11■□□□□ 0.33
LIME1-210ENST00000621325 NPPCP23582 126 aa17.11■□□□□ 0.33
LIME1-210ENST00000621325 ATP5G3P48201 142 aa17.11■□□□□ 0.33
LIME1-210ENST00000621325 CD69Q07108 199 aa17.11■□□□□ 0.33
LIME1-210ENST00000621325 OR51G1Q8NGK1 321 aa17.11■□□□□ 0.33
LIME1-210ENST00000621325 OR2T6Q8NHC8 308 aa17.11■□□□□ 0.33
LIME1-210ENST00000621325 PARLQ9H300 379 aa17.11■□□□□ 0.33
LIME1-210ENST00000621325 KCNIP2Q9NS61 270 aa17.11■□□□□ 0.33
LIME1-210ENST00000621325 TMEM250H0YL14 139 aa17.11■□□□□ 0.33
LIME1-210ENST00000621325 REG1AP05451 166 aa17.11■□□□□ 0.33
LIME1-210ENST00000621325 MED13LQ71F56 2210 aa17.1■□□□□ 0.33
LIME1-210ENST00000621325 A0A1W2PPI3 338 aa17.1■□□□□ 0.33
LIME1-210ENST00000621325 RBP4P02753 201 aa17.1■□□□□ 0.33
LIME1-210ENST00000621325 OR10J1P30954 320 aa17.1■□□□□ 0.33
LIME1-210ENST00000621325 LGALS7P47929 136 aa17.1■□□□□ 0.33
LIME1-210ENST00000621325 PNRC1Q12796 327 aaPredicted RBP17.1■□□□□ 0.33
LIME1-210ENST00000621325 TMEM249Q2WGJ8 235 aa17.1■□□□□ 0.33
LIME1-210ENST00000621325 CST9LP1Q5W188 147 aa17.1■□□□□ 0.33
LIME1-210ENST00000621325 IGFBPL1Q8WX77 278 aa17.1■□□□□ 0.33
LIME1-210ENST00000621325 A0A1W2PN81 502 aa17.1■□□□□ 0.33
LIME1-210ENST00000621325 INS-IGF2F8WCM5 200 aa17.1■□□□□ 0.33
LIME1-210ENST00000621325 ACTL6BO94805 426 aa17.1■□□□□ 0.33
LIME1-210ENST00000621325 IGHV3-48P01763 117 aa17.1■□□□□ 0.33
LIME1-210ENST00000621325 CHRNA7P36544 502 aa17.1■□□□□ 0.33
LIME1-210ENST00000621325 ATP5IP56385 69 aaPredicted RBP17.1■□□□□ 0.33
LIME1-210ENST00000621325 DNAJC4Q9NNZ3 241 aa17.1■□□□□ 0.33
LIME1-210ENST00000621325 CHTOPQ9Y3Y2 248 aaKnown RBP17.1■□□□□ 0.33
LIME1-210ENST00000621325 SPTAN1Q13813 2472 aaKnown RBP17.09■□□□□ 0.33
LIME1-210ENST00000621325 FOXH1O75593 365 aa17.09■□□□□ 0.33
LIME1-210ENST00000621325 CDKN1BP46527 198 aa17.09■□□□□ 0.33
LIME1-210ENST00000621325 RPEQ96AT9 228 aa17.09■□□□□ 0.33
LIME1-210ENST00000621325 CHODLQ9H9P2 273 aa17.09■□□□□ 0.33
LIME1-210ENST00000621325 APELAP0DMC3 54 aa17.09■□□□□ 0.33
LIME1-210ENST00000621325 SSBP2P81877 361 aaPredicted RBP17.09■□□□□ 0.33
LIME1-210ENST00000621325 OR5I1Q13606 314 aa17.09■□□□□ 0.33
LIME1-210ENST00000621325 CYP2G1PQ6ZSU1 146 aa17.09■□□□□ 0.33
LIME1-210ENST00000621325 ACY3Q96HD9 319 aa17.09■□□□□ 0.33
LIME1-210ENST00000621325 FNDC4Q9H6D8 234 aaPredicted RBP17.09■□□□□ 0.33
LIME1-210ENST00000621325 UBTD1Q9HAC8 227 aa17.09■□□□□ 0.33
LIME1-210ENST00000621325 NAT8Q9UHE5 227 aa17.09■□□□□ 0.33
LIME1-210ENST00000621325 B4DEV8 164 aa17.08■□□□□ 0.33
LIME1-210ENST00000621325 LY6LH3BQJ8 138 aa17.08■□□□□ 0.33
LIME1-210ENST00000621325 ADIRFQ15847 76 aa17.08■□□□□ 0.33
LIME1-210ENST00000621325 TMEM241Q24JQ0 296 aa17.08■□□□□ 0.33
LIME1-210ENST00000621325 TMEM183AQ8IXX5 376 aa17.08■□□□□ 0.33
LIME1-210ENST00000621325 ELOVL1Q9BW60 279 aa17.08■□□□□ 0.33
LIME1-210ENST00000621325 SSBP3Q9BWW4 388 aaPredicted RBP17.08■□□□□ 0.33
LIME1-210ENST00000621325 ASH1LQ9NR48 2969 aaKnown RBP17.08■□□□□ 0.32
LIME1-210ENST00000621325 CXorf1O96002 111 aa17.08■□□□□ 0.32
LIME1-210ENST00000621325 RHOBP62745 196 aa17.08■□□□□ 0.32
LIME1-210ENST00000621325 PSG5Q15238 335 aa17.08■□□□□ 0.32
LIME1-210ENST00000621325 PRSS8Q16651 343 aa17.08■□□□□ 0.32
LIME1-210ENST00000621325 C19orf35Q6ZS72 473 aa17.08■□□□□ 0.32
LIME1-210ENST00000621325 MIR17HGQ75NE6 70 aa17.08■□□□□ 0.32
LIME1-210ENST00000621325 PITPNC1Q9UKF7 332 aa17.08■□□□□ 0.32
LIME1-210ENST00000621325 CFAP46Q8IYW2 2715 aa17.07■□□□□ 0.32
LIME1-210ENST00000621325 A0A1W2PPQ1 181 aa17.07■□□□□ 0.32
LIME1-210ENST00000621325 CRYGBP07316 175 aa17.07■□□□□ 0.32
LIME1-210ENST00000621325 S100A7P31151 101 aa17.07■□□□□ 0.32
LIME1-210ENST00000621325 KLRD1Q13241 179 aa17.07■□□□□ 0.32
LIME1-210ENST00000621325 FAM78BQ5VT40 261 aa17.07■□□□□ 0.32
LIME1-210ENST00000621325 ZNF705AQ6ZN79 300 aaPredicted RBP17.07■□□□□ 0.32
LIME1-210ENST00000621325 TEX45Q8NA69 505 aa17.07■□□□□ 0.32
LIME1-210ENST00000621325 LOC105371242A0A075B767 164 aa17.07■□□□□ 0.32
LIME1-210ENST00000621325 M0QZK8 103 aa17.07■□□□□ 0.32
LIME1-210ENST00000621325 GGCTO75223 188 aaKnown RBP17.07■□□□□ 0.32
LIME1-210ENST00000621325 BRS3P32247 399 aa17.07■□□□□ 0.32
LIME1-210ENST00000621325 GNB1P62873 340 aa17.07■□□□□ 0.32
LIME1-210ENST00000621325 SIGLEC9Q9Y336 463 aa17.07■□□□□ 0.32
LIME1-210ENST00000621325 IGLC7A0M8Q6 106 aa17.06■□□□□ 0.32
LIME1-210ENST00000621325 GCHFRP30047 84 aa17.06■□□□□ 0.32
LIME1-210ENST00000621325 TFPI2P48307 235 aa17.06■□□□□ 0.32
LIME1-210ENST00000621325 RPL23P62829 140 aaKnown RBP17.06■□□□□ 0.32
LIME1-210ENST00000621325 TNXAQ16473 311 aa17.06■□□□□ 0.32
LIME1-210ENST00000621325 DERL1Q9BUN8 251 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 182.6 ms