RNA–Protein interactions for RNA: ENST00000621217.4

GGA3-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-222ENST00000621217 HILPDAQ9Y5L2 63 aa7.56□□□□□ -1.2
GGA3-222ENST00000621217 TRAV30A0A087WSZ9 112 aa7.56□□□□□ -1.2
GGA3-222ENST00000621217 OR4C46A6NHA9 309 aa7.56□□□□□ -1.2
GGA3-222ENST00000621217 A8MWL6 223 aa7.56□□□□□ -1.2
GGA3-222ENST00000621217 MGST3O14880 152 aa7.56□□□□□ -1.2
GGA3-222ENST00000621217 MPDU1O75352 247 aa7.56□□□□□ -1.2
GGA3-222ENST00000621217 CCL3L1P16619 93 aa7.56□□□□□ -1.2
GGA3-222ENST00000621217 CD1BP29016 333 aa7.56□□□□□ -1.2
GGA3-222ENST00000621217 SMAGPQ0VAQ4 97 aa7.56□□□□□ -1.2
GGA3-222ENST00000621217 C10orf91Q5T1B1 145 aa7.56□□□□□ -1.2
GGA3-222ENST00000621217 TMEM116Q8NCL8 245 aa7.56□□□□□ -1.2
GGA3-222ENST00000621217 OR1L4Q8NGR5 311 aa7.56□□□□□ -1.2
GGA3-222ENST00000621217 GP6Q9HCN6 339 aa7.56□□□□□ -1.2
GGA3-222ENST00000621217 JKAMPQ9P055 326 aa7.56□□□□□ -1.2
GGA3-222ENST00000621217 MLNRO43193 412 aa7.55□□□□□ -1.2
GGA3-222ENST00000621217 ZNF137PP52743 207 aa7.55□□□□□ -1.2
GGA3-222ENST00000621217 WDR86Q86TI4 376 aa7.55□□□□□ -1.2
GGA3-222ENST00000621217 CALYQ9NYX4 217 aa7.55□□□□□ -1.2
GGA3-222ENST00000621217 FRYQ5TBA9 3013 aa7.55□□□□□ -1.2
GGA3-222ENST00000621217 TRAV9-1A0A075B6T8 112 aa7.55□□□□□ -1.2
GGA3-222ENST00000621217 SMIM13P0DJ93 91 aa7.55□□□□□ -1.2
GGA3-222ENST00000621217 OPRK1P41145 380 aa7.55□□□□□ -1.2
GGA3-222ENST00000621217 NBL1P41271 181 aa7.55□□□□□ -1.2
GGA3-222ENST00000621217 ARF6P62330 175 aa7.55□□□□□ -1.2
GGA3-222ENST00000621217 NRN1LQ496H8 165 aa7.55□□□□□ -1.2
GGA3-222ENST00000621217 NMSQ5H8A3 153 aa7.55□□□□□ -1.2
GGA3-222ENST00000621217 ZNF497Q6ZNH5 498 aa7.55□□□□□ -1.2
GGA3-222ENST00000621217 SSC4DQ8WTU2 575 aa7.55□□□□□ -1.2
GGA3-222ENST00000621217 RPEQ96AT9 228 aa7.55□□□□□ -1.2
GGA3-222ENST00000621217 PLA2G2EQ9NZK7 142 aa7.55□□□□□ -1.2
GGA3-222ENST00000621217 TRAV9-2A0A087WT02 112 aa7.55□□□□□ -1.2
GGA3-222ENST00000621217 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.55□□□□□ -1.2
GGA3-222ENST00000621217 A0A1B0GW64 132 aa7.55□□□□□ -1.2
GGA3-222ENST00000621217 MAS1LP35410 378 aa7.55□□□□□ -1.2
GGA3-222ENST00000621217 CDKN1AP38936 164 aa7.55□□□□□ -1.2
GGA3-222ENST00000621217 CRIP3Q6Q6R5 217 aa7.55□□□□□ -1.2
GGA3-222ENST00000621217 PCSK4Q6UW60 755 aa7.55□□□□□ -1.2
GGA3-222ENST00000621217 COLCA1Q6ZS62 124 aa7.55□□□□□ -1.2
GGA3-222ENST00000621217 ZNF525Q8N782 197 aa7.55□□□□□ -1.2
GGA3-222ENST00000621217 LRTM2Q8N967 370 aa7.55□□□□□ -1.2
GGA3-222ENST00000621217 OR4S2Q8NH73 311 aa7.55□□□□□ -1.2
GGA3-222ENST00000621217 ST6GALNAC6Q969X2 333 aa7.55□□□□□ -1.2
GGA3-222ENST00000621217 PLSCR4Q9NRQ2 329 aa7.55□□□□□ -1.2
GGA3-222ENST00000621217 JMJD1CQ15652 2540 aa7.55□□□□□ -1.2
GGA3-222ENST00000621217 PGPEP1LA6NFU8 196 aa7.54□□□□□ -1.2
GGA3-222ENST00000621217 FOXI3A8MTJ6 420 aaPredicted RBP7.54□□□□□ -1.2
GGA3-222ENST00000621217 SLC17A3O00476 420 aa7.54□□□□□ -1.2
GGA3-222ENST00000621217 IGHG3P01860 377 aa7.54□□□□□ -1.2
GGA3-222ENST00000621217 GATA2P23769 480 aaPredicted RBP7.54□□□□□ -1.2
GGA3-222ENST00000621217 IL3RAP26951 378 aa7.54□□□□□ -1.2
GGA3-222ENST00000621217 TPTE2P1Q5T6R2 138 aa7.54□□□□□ -1.2
GGA3-222ENST00000621217 WDR31Q8NA23 367 aa7.54□□□□□ -1.2
GGA3-222ENST00000621217 OR51G1Q8NGK1 321 aa7.54□□□□□ -1.2
GGA3-222ENST00000621217 SGK494Q96LW2 274 aa7.54□□□□□ -1.2
GGA3-222ENST00000621217 RAB1BQ9H0U4 201 aa7.54□□□□□ -1.2
GGA3-222ENST00000621217 TMEM140Q9NV12 185 aa7.54□□□□□ -1.2
GGA3-222ENST00000621217 IL36BQ9NZH7 164 aa7.54□□□□□ -1.2
GGA3-222ENST00000621217 RNF115Q9Y4L5 304 aa7.54□□□□□ -1.2
GGA3-222ENST00000621217 IGHV3OR16-10A0A075B7F0 116 aa7.54□□□□□ -1.2
GGA3-222ENST00000621217 MYOD1P15172 320 aa7.54□□□□□ -1.2
GGA3-222ENST00000621217 NPY1RP25929 384 aa7.54□□□□□ -1.2
GGA3-222ENST00000621217 DLX1P56177 255 aa7.54□□□□□ -1.2
GGA3-222ENST00000621217 AMMECR1LQ6DCA0 310 aa7.54□□□□□ -1.2
GGA3-222ENST00000621217 TEPPQ6URK8 271 aa7.54□□□□□ -1.2
GGA3-222ENST00000621217 PDPNQ86YL7 162 aa7.54□□□□□ -1.2
GGA3-222ENST00000621217 ZNRD1Q9P1U0 126 aa7.54□□□□□ -1.2
GGA3-222ENST00000621217 LOC107984156A0A0G2JMH3 177 aa7.54□□□□□ -1.2
GGA3-222ENST00000621217 IQCF6A8MYZ5 107 aa7.54□□□□□ -1.2
GGA3-222ENST00000621217 J3QR06 171 aa7.54□□□□□ -1.2
GGA3-222ENST00000621217 REG1AP05451 166 aa7.54□□□□□ -1.2
GGA3-222ENST00000621217 LIPFP07098 398 aa7.54□□□□□ -1.2
GGA3-222ENST00000621217 ORM2P19652 201 aa7.54□□□□□ -1.2
GGA3-222ENST00000621217 ASCL4Q6XD76 172 aa7.54□□□□□ -1.2
GGA3-222ENST00000621217 ARL17AQ8IVW1 177 aa7.54□□□□□ -1.2
GGA3-222ENST00000621217 ZBTB34Q8NCN2 500 aa7.54□□□□□ -1.2
GGA3-222ENST00000621217 HARBI1Q96MB7 349 aa7.54□□□□□ -1.2
GGA3-222ENST00000621217 ARHGAP32A7KAX9 2087 aa7.54□□□□□ -1.2
GGA3-222ENST00000621217 TMEM238LA0A1B0GVL6 79 aa7.53□□□□□ -1.2
GGA3-222ENST00000621217 A6NJY4 79 aa7.53□□□□□ -1.2
GGA3-222ENST00000621217 H3BUT2 72 aa7.53□□□□□ -1.2
GGA3-222ENST00000621217 Q6P435 159 aa7.53□□□□□ -1.2
GGA3-222ENST00000621217 OR2K2Q8NGT1 345 aa7.53□□□□□ -1.2
GGA3-222ENST00000621217 KCNS1Q96KK3 526 aa7.53□□□□□ -1.2
GGA3-222ENST00000621217 DIRC2Q96SL1 478 aa7.53□□□□□ -1.2
GGA3-222ENST00000621217 SLC25A33Q9BSK2 321 aa7.53□□□□□ -1.2
GGA3-222ENST00000621217 PXMP4Q9Y6I8 212 aa7.53□□□□□ -1.2
GGA3-222ENST00000621217 PQLC2Q6ZP29 291 aa7.53□□□□□ -1.2
GGA3-222ENST00000621217 RNASEH2CQ8TDP1 164 aaKnown RBP7.53□□□□□ -1.2
GGA3-222ENST00000621217 RAB1CQ92928 201 aa7.53□□□□□ -1.2
GGA3-222ENST00000621217 C5orf30Q96GV9 206 aa7.53□□□□□ -1.2
GGA3-222ENST00000621217 FAM215AQ9Y5M1 114 aa7.53□□□□□ -1.2
GGA3-222ENST00000621217 SLC25A15Q9Y619 301 aa7.53□□□□□ -1.2
GGA3-222ENST00000621217 ZNF462Q96JM2 2506 aa7.53□□□□□ -1.2
GGA3-222ENST00000621217 FAM90A26D6RGX4 464 aa7.53□□□□□ -1.2
GGA3-222ENST00000621217 RPL7P18124 248 aaKnown RBP7.53□□□□□ -1.2
GGA3-222ENST00000621217 CD24P25063 80 aa7.53□□□□□ -1.2
GGA3-222ENST00000621217 FAM19A2Q8N3H0 131 aa7.53□□□□□ -1.2
GGA3-222ENST00000621217 OR5A1Q8NGJ0 315 aa7.53□□□□□ -1.2
GGA3-222ENST00000621217 OR10AG1Q8NH19 301 aa7.53□□□□□ -1.2
GGA3-222ENST00000621217 NPVFQ9HCQ7 196 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms