RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 IGHV3OR16-13A0A075B7E8 117 aa16.21■□□□□ 0.19
SRRT-218ENST00000620394 IGHV3-74A0A0B4J1X5 117 aa16.21■□□□□ 0.19
SRRT-218ENST00000620394 HOXA1P49639 335 aaPredicted RBP16.21■□□□□ 0.19
SRRT-218ENST00000620394 SUB1P53999 127 aaKnown RBP eCLIP16.21■□□□□ 0.19
SRRT-218ENST00000620394 MEF2DQ14814 521 aa16.21■□□□□ 0.19
SRRT-218ENST00000620394 SURF2Q15527 256 aaPredicted RBP16.21■□□□□ 0.19
SRRT-218ENST00000620394 TCF24Q7RTU0 167 aa16.21■□□□□ 0.19
SRRT-218ENST00000620394 FAM219AQ8IW50 185 aa16.21■□□□□ 0.19
SRRT-218ENST00000620394 ST8SIA2Q92186 375 aa16.21■□□□□ 0.19
SRRT-218ENST00000620394 RRNAD1Q96FB5 475 aaKnown RBP16.21■□□□□ 0.19
SRRT-218ENST00000620394 FNDC4Q9H6D8 234 aaPredicted RBP16.21■□□□□ 0.19
SRRT-218ENST00000620394 PUS1Q9Y606 427 aaKnown RBP eCLIP16.21■□□□□ 0.19
SRRT-218ENST00000620394 TRAV2A0A0B4J234 112 aa16.2■□□□□ 0.18
SRRT-218ENST00000620394 CDS2O95674 445 aa16.2■□□□□ 0.18
SRRT-218ENST00000620394 TMEM50AO95807 157 aa16.2■□□□□ 0.18
SRRT-218ENST00000620394 ETV6P41212 452 aa16.2■□□□□ 0.18
SRRT-218ENST00000620394 RPL5P46777 297 aaKnown RBP16.2■□□□□ 0.18
SRRT-218ENST00000620394 SPCS2Q15005 226 aa16.2■□□□□ 0.18
SRRT-218ENST00000620394 ZNF124Q15973 351 aa16.2■□□□□ 0.18
SRRT-218ENST00000620394 Q6ZRM9 215 aa16.2■□□□□ 0.18
SRRT-218ENST00000620394 GPR141Q7Z602 305 aa16.2■□□□□ 0.18
SRRT-218ENST00000620394 MRPL36Q9P0J6 103 aaKnown RBP16.2■□□□□ 0.18
SRRT-218ENST00000620394 HECTD4Q9Y4D8 3996 aa16.19■□□□□ 0.18
SRRT-218ENST00000620394 A0A1B0GU03 582 aa16.19■□□□□ 0.18
SRRT-218ENST00000620394 CTDSP2O14595 271 aa16.19■□□□□ 0.18
SRRT-218ENST00000620394 RGS5O15539 181 aa16.19■□□□□ 0.18
SRRT-218ENST00000620394 APOHP02749 345 aaPredicted RBP16.19■□□□□ 0.18
SRRT-218ENST00000620394 OR5AC1P0C628 307 aa16.19■□□□□ 0.18
SRRT-218ENST00000620394 TFPI2P48307 235 aa16.19■□□□□ 0.18
SRRT-218ENST00000620394 FAAP20Q6NZ36 180 aa16.19■□□□□ 0.18
SRRT-218ENST00000620394 OR52E5Q8NH55 327 aa16.19■□□□□ 0.18
SRRT-218ENST00000620394 LHFPL5Q8TAF8 219 aa16.19■□□□□ 0.18
SRRT-218ENST00000620394 GLYATL2Q8WU03 294 aa16.19■□□□□ 0.18
SRRT-218ENST00000620394 RTBDNQ9BSG5 229 aaPredicted RBP16.19■□□□□ 0.18
SRRT-218ENST00000620394 IGKV3-7A0A075B6H7 116 aa16.18■□□□□ 0.18
SRRT-218ENST00000620394 CTDSPLO15194 276 aa16.18■□□□□ 0.18
SRRT-218ENST00000620394 CLN5O75503 358 aa16.18■□□□□ 0.18
SRRT-218ENST00000620394 SPCS3P61009 180 aa16.18■□□□□ 0.18
SRRT-218ENST00000620394 PAFAH1B2P68402 229 aa16.18■□□□□ 0.18
SRRT-218ENST00000620394 LILRB2Q8N423 598 aa16.18■□□□□ 0.18
SRRT-218ENST00000620394 OR4X1Q8NH49 305 aa16.18■□□□□ 0.18
SRRT-218ENST00000620394 RNASE11Q8TAA1 199 aaKnown RBP16.18■□□□□ 0.18
SRRT-218ENST00000620394 GATAD1Q8WUU5 269 aa16.18■□□□□ 0.18
SRRT-218ENST00000620394 RBPMSQ93062 196 aaKnown RBP16.18■□□□□ 0.18
SRRT-218ENST00000620394 CSTL1Q9H114 145 aa16.18■□□□□ 0.18
SRRT-218ENST00000620394 NAA60Q9H7X0 242 aa16.18■□□□□ 0.18
SRRT-218ENST00000620394 ENY2Q9NPA8 101 aa16.18■□□□□ 0.18
SRRT-218ENST00000620394 C14orf166Q9Y224 244 aaKnown RBP16.18■□□□□ 0.18
SRRT-218ENST00000620394 DFFBO76075 338 aa16.17■□□□□ 0.18
SRRT-218ENST00000620394 OPRK1P41145 380 aa16.17■□□□□ 0.18
SRRT-218ENST00000620394 GBGT1Q8N5D6 347 aa16.17■□□□□ 0.18
SRRT-218ENST00000620394 OR4C16Q8NGL9 310 aa16.17■□□□□ 0.18
SRRT-218ENST00000620394 MS4A6AQ9H2W1 248 aa16.17■□□□□ 0.18
SRRT-218ENST00000620394 TMEM231Q9H6L2 316 aa16.17■□□□□ 0.18
SRRT-218ENST00000620394 CCDC59Q9P031 241 aaKnown RBP16.17■□□□□ 0.18
SRRT-218ENST00000620394 RABL2AQ9UBK7 228 aaPredicted RBP16.17■□□□□ 0.18
SRRT-218ENST00000620394 RABL2BQ9UNT1 228 aa16.17■□□□□ 0.18
SRRT-218ENST00000620394 MPTX1A8MV57 137 aa16.16■□□□□ 0.18
SRRT-218ENST00000620394 DISC1C4P0D8 188 aa16.16■□□□□ 0.18
SRRT-218ENST00000620394 PHLDA1Q8WV24 401 aaPredicted RBP16.16■□□□□ 0.18
SRRT-218ENST00000620394 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.16■□□□□ 0.18
SRRT-218ENST00000620394 TEX13DA0A0J9YY54 714 aaPredicted RBP16.15■□□□□ 0.18
SRRT-218ENST00000620394 CRYM-AS1A6NIL9 109 aa16.15■□□□□ 0.18
SRRT-218ENST00000620394 IGKV1-17P01599 117 aa16.15■□□□□ 0.18
SRRT-218ENST00000620394 AKAIN1P0CW23 69 aa16.15■□□□□ 0.18
SRRT-218ENST00000620394 CRYBB3P26998 211 aa16.15■□□□□ 0.18
SRRT-218ENST00000620394 HTR2BP41595 481 aa16.15■□□□□ 0.18
SRRT-218ENST00000620394 DHODHQ02127 395 aa16.15■□□□□ 0.18
SRRT-218ENST00000620394 SELENOHQ8IZQ5 122 aaKnown RBP16.15■□□□□ 0.18
SRRT-218ENST00000620394 DYNC2LI1Q8TCX1 351 aa16.15■□□□□ 0.18
SRRT-218ENST00000620394 RAB2BQ8WUD1 216 aa16.15■□□□□ 0.18
SRRT-218ENST00000620394 BCL7BQ9BQE9 202 aa16.15■□□□□ 0.18
SRRT-218ENST00000620394 GPR132Q9UNW8 380 aa16.15■□□□□ 0.18
SRRT-218ENST00000620394 SCGB2A1O75556 95 aa16.14■□□□□ 0.17
SRRT-218ENST00000620394 PRRT1Q99946 306 aa16.14■□□□□ 0.17
SRRT-218ENST00000620394 C11orf68Q9H3H3 251 aaKnown RBP16.14■□□□□ 0.17
SRRT-218ENST00000620394 CACNG5Q9UF02 275 aa16.14■□□□□ 0.17
SRRT-218ENST00000620394 DNAH10Q8IVF4 4471 aa16.13■□□□□ 0.17
SRRT-218ENST00000620394 IGHV3-66A0A0C4DH42 116 aa16.13■□□□□ 0.17
SRRT-218ENST00000620394 A0A1W2PS18 150 aa16.13■□□□□ 0.17
SRRT-218ENST00000620394 NPPCP23582 126 aa16.13■□□□□ 0.17
SRRT-218ENST00000620394 IL18Q14116 193 aa16.13■□□□□ 0.17
SRRT-218ENST00000620394 MLANAQ16655 118 aa16.13■□□□□ 0.17
SRRT-218ENST00000620394 C2orf83Q53S99 150 aa16.13■□□□□ 0.17
SRRT-218ENST00000620394 FAM24BQ8N5W8 94 aa16.13■□□□□ 0.17
SRRT-218ENST00000620394 DIRAS2Q96HU8 199 aa16.13■□□□□ 0.17
SRRT-218ENST00000620394 METTL26Q96S19 204 aa16.13■□□□□ 0.17
SRRT-218ENST00000620394 TMEM56-RWDD3S4R434 201 aa16.13■□□□□ 0.17
SRRT-218ENST00000620394 TRAV30A0A087WSZ9 112 aa16.12■□□□□ 0.17
SRRT-218ENST00000620394 RPS10-NUDT3A0A1W2PQS6 291 aa16.12■□□□□ 0.17
SRRT-218ENST00000620394 ANKRD20A5PA0PJZ0 165 aa16.12■□□□□ 0.17
SRRT-218ENST00000620394 DNASE2O00115 360 aaPredicted RBP16.12■□□□□ 0.17
SRRT-218ENST00000620394 GSTZ1O43708 216 aaPredicted RBP16.12■□□□□ 0.17
SRRT-218ENST00000620394 DEFB131AP59861 70 aa16.12■□□□□ 0.17
SRRT-218ENST00000620394 TMEM268Q5VZI3 342 aa16.12■□□□□ 0.17
SRRT-218ENST00000620394 CLVS1Q8IUQ0 354 aaPredicted RBP16.12■□□□□ 0.17
SRRT-218ENST00000620394 RNASEH2CQ8TDP1 164 aaKnown RBP16.12■□□□□ 0.17
SRRT-218ENST00000620394 IL22RA2Q969J5 263 aa16.12■□□□□ 0.17
SRRT-218ENST00000620394 GPR146Q96CH1 333 aa16.12■□□□□ 0.17
SRRT-218ENST00000620394 IGLC1P0CG04 106 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms