RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 RAB13P51153 203 aa17.2■□□□□ 0.34
SGMS1-210ENST00000619438 UBE2E1P51965 193 aa17.2■□□□□ 0.34
SGMS1-210ENST00000619438 CD81P60033 236 aa17.2■□□□□ 0.34
SGMS1-210ENST00000619438 PIP4P2Q8N4L2 257 aa17.2■□□□□ 0.34
SGMS1-210ENST00000619438 C11orf42Q8N5U0 333 aa17.2■□□□□ 0.34
SGMS1-210ENST00000619438 A0A0U1RQK1 487 aa17.2■□□□□ 0.34
SGMS1-210ENST00000619438 SMCO3A2RU48 225 aa17.2■□□□□ 0.34
SGMS1-210ENST00000619438 NPFFO15130 113 aa17.2■□□□□ 0.34
SGMS1-210ENST00000619438 ARSJQ5FYB0 599 aaPredicted RBP17.2■□□□□ 0.34
SGMS1-210ENST00000619438 Q6YL49 198 aa17.2■□□□□ 0.34
SGMS1-210ENST00000619438 OR4C13Q8NGP0 309 aa17.2■□□□□ 0.34
SGMS1-210ENST00000619438 FLYWCH2Q96CP2 140 aaKnown RBP17.2■□□□□ 0.34
SGMS1-210ENST00000619438 YIF1AO95070 293 aa17.19■□□□□ 0.34
SGMS1-210ENST00000619438 OR2C1O95371 312 aa17.19■□□□□ 0.34
SGMS1-210ENST00000619438 RBP4P02753 201 aa17.19■□□□□ 0.34
SGMS1-210ENST00000619438 C2orf83Q53S99 150 aa17.19■□□□□ 0.34
SGMS1-210ENST00000619438 VSTM2AQ8TAG5 236 aa17.19■□□□□ 0.34
SGMS1-210ENST00000619438 TMEM167AQ8TBQ9 72 aa17.19■□□□□ 0.34
SGMS1-210ENST00000619438 ISOC2Q96AB3 205 aa17.19■□□□□ 0.34
SGMS1-210ENST00000619438 HARBI1Q96MB7 349 aa17.19■□□□□ 0.34
SGMS1-210ENST00000619438 PRDM13Q9H4Q3 707 aa17.19■□□□□ 0.34
SGMS1-210ENST00000619438 RAB5AP20339 215 aa17.18■□□□□ 0.34
SGMS1-210ENST00000619438 IL3RAP26951 378 aa17.18■□□□□ 0.34
SGMS1-210ENST00000619438 MC5RP33032 325 aa17.18■□□□□ 0.34
SGMS1-210ENST00000619438 TEPPQ6URK8 271 aa17.18■□□□□ 0.34
SGMS1-210ENST00000619438 PNKDQ8N490 385 aa17.18■□□□□ 0.34
SGMS1-210ENST00000619438 OR1L8Q8NGR8 309 aa17.18■□□□□ 0.34
SGMS1-210ENST00000619438 TMEM133Q9H2Q1 129 aa17.18■□□□□ 0.34
SGMS1-210ENST00000619438 SDF2L1Q9HCN8 221 aa17.18■□□□□ 0.34
SGMS1-210ENST00000619438 TMEM242Q9NWH2 141 aa17.18■□□□□ 0.34
SGMS1-210ENST00000619438 WASHC3Q9Y3C0 194 aa17.18■□□□□ 0.34
SGMS1-210ENST00000619438 PXMP4Q9Y6I8 212 aa17.18■□□□□ 0.34
SGMS1-210ENST00000619438 CLDN34H7C241 214 aa17.17■□□□□ 0.34
SGMS1-210ENST00000619438 RAB5BP61020 215 aa17.17■□□□□ 0.34
SGMS1-210ENST00000619438 RAB31Q13636 194 aa17.17■□□□□ 0.34
SGMS1-210ENST00000619438 TMPRSS5Q9H3S3 457 aa17.17■□□□□ 0.34
SGMS1-210ENST00000619438 RNASE1P07998 156 aaKnown RBP17.16■□□□□ 0.34
SGMS1-210ENST00000619438 MYOD1P15172 320 aa17.16■□□□□ 0.34
SGMS1-210ENST00000619438 SAA4P35542 130 aa17.16■□□□□ 0.34
SGMS1-210ENST00000619438 RPL29P47914 159 aaKnown RBP17.16■□□□□ 0.34
SGMS1-210ENST00000619438 C12orf54Q6X4T0 127 aa17.16■□□□□ 0.34
SGMS1-210ENST00000619438 FAM24BQ8N5W8 94 aa17.16■□□□□ 0.34
SGMS1-210ENST00000619438 SSMEM1Q8WWF3 244 aa17.16■□□□□ 0.34
SGMS1-210ENST00000619438 BIN3Q9NQY0 253 aa17.16■□□□□ 0.34
SGMS1-210ENST00000619438 NDUFA4L2Q9NRX3 87 aa17.16■□□□□ 0.34
SGMS1-210ENST00000619438 A0A1W2PPV4 95 aa17.16■□□□□ 0.34
SGMS1-210ENST00000619438 C1orf196B1AJZ1 125 aa17.16■□□□□ 0.34
SGMS1-210ENST00000619438 COX7A1P24310 79 aa17.16■□□□□ 0.34
SGMS1-210ENST00000619438 LGALS4P56470 323 aa17.16■□□□□ 0.34
SGMS1-210ENST00000619438 RPL8P62917 257 aaKnown RBP17.16■□□□□ 0.34
SGMS1-210ENST00000619438 HABP2Q14520 560 aaPredicted RBP17.16■□□□□ 0.34
SGMS1-210ENST00000619438 TGIF2LXQ8IUE1 241 aa17.16■□□□□ 0.34
SGMS1-210ENST00000619438 HMGB3O15347 200 aaKnown RBP17.15■□□□□ 0.34
SGMS1-210ENST00000619438 CYP2G1PQ6ZSU1 146 aa17.15■□□□□ 0.34
SGMS1-210ENST00000619438 HINT2Q9BX68 163 aa17.15■□□□□ 0.34
SGMS1-210ENST00000619438 ZNF727A8MUV8 499 aa17.14■□□□□ 0.33
SGMS1-210ENST00000619438 EIF3GO75821 320 aaKnown RBP eCLIP17.14■□□□□ 0.33
SGMS1-210ENST00000619438 GCSAMLQ5JQS6 135 aa17.14■□□□□ 0.33
SGMS1-210ENST00000619438 HCP5Q6MZN7 132 aa17.14■□□□□ 0.33
SGMS1-210ENST00000619438 C1QL4Q86Z23 238 aa17.14■□□□□ 0.33
SGMS1-210ENST00000619438 TXNDC17Q9BRA2 123 aa17.14■□□□□ 0.33
SGMS1-210ENST00000619438 COMMD5Q9GZQ3 224 aa17.14■□□□□ 0.33
SGMS1-210ENST00000619438 NAT8Q9UHE5 227 aa17.14■□□□□ 0.33
SGMS1-210ENST00000619438 PRELID1Q9Y255 219 aa17.14■□□□□ 0.33
SGMS1-210ENST00000619438 A0A1W2PN81 502 aa17.13■□□□□ 0.33
SGMS1-210ENST00000619438 IGLV1-47P01700 117 aa17.13■□□□□ 0.33
SGMS1-210ENST00000619438 IGLV2-23P01705 113 aa17.13■□□□□ 0.33
SGMS1-210ENST00000619438 STAG3L2P0CL84 134 aa17.13■□□□□ 0.33
SGMS1-210ENST00000619438 STAG3L3P0CL85 134 aa17.13■□□□□ 0.33
SGMS1-210ENST00000619438 RNASE2P10153 161 aaKnown RBP17.13■□□□□ 0.33
SGMS1-210ENST00000619438 CHRNA7P36544 502 aa17.13■□□□□ 0.33
SGMS1-210ENST00000619438 REG1BP48304 166 aa17.13■□□□□ 0.33
SGMS1-210ENST00000619438 PRR20EP86478 221 aa17.13■□□□□ 0.33
SGMS1-210ENST00000619438 PRR20CP86479 221 aa17.13■□□□□ 0.33
SGMS1-210ENST00000619438 PRR20DP86480 221 aa17.13■□□□□ 0.33
SGMS1-210ENST00000619438 PRR20BP86481 221 aa17.13■□□□□ 0.33
SGMS1-210ENST00000619438 PRR20AP86496 221 aa17.13■□□□□ 0.33
SGMS1-210ENST00000619438 MIC13Q5XKP0 118 aa17.13■□□□□ 0.33
SGMS1-210ENST00000619438 TMEM144Q7Z5S9 345 aa17.13■□□□□ 0.33
SGMS1-210ENST00000619438 TMEM86BQ8N661 226 aa17.13■□□□□ 0.33
SGMS1-210ENST00000619438 ANK2Q01484 3957 aa17.13■□□□□ 0.33
SGMS1-210ENST00000619438 TMEM89A2RUT3 159 aa17.13■□□□□ 0.33
SGMS1-210ENST00000619438 IER3P46695 156 aa17.13■□□□□ 0.33
SGMS1-210ENST00000619438 LGALS7P47929 136 aa17.13■□□□□ 0.33
SGMS1-210ENST00000619438 PRRX1P54821 245 aa17.13■□□□□ 0.33
SGMS1-210ENST00000619438 DIAPH2-AS1Q14236 149 aa17.13■□□□□ 0.33
SGMS1-210ENST00000619438 BEND2Q8NDZ0 799 aa17.13■□□□□ 0.33
SGMS1-210ENST00000619438 SMIM7Q9BQ49 75 aa17.13■□□□□ 0.33
SGMS1-210ENST00000619438 CTDSP1Q9GZU7 261 aa17.13■□□□□ 0.33
SGMS1-210ENST00000619438 PAGE4O60829 102 aa17.12■□□□□ 0.33
SGMS1-210ENST00000619438 IGHV4-59P01825 116 aa17.12■□□□□ 0.33
SGMS1-210ENST00000619438 B2MP61769 119 aa17.12■□□□□ 0.33
SGMS1-210ENST00000619438 CACNG8Q8WXS5 425 aa17.12■□□□□ 0.33
SGMS1-210ENST00000619438 IGHV2-26A0A0B4J1V2 119 aa17.11■□□□□ 0.33
SGMS1-210ENST00000619438 FAM181BA6NEQ2 426 aa17.11■□□□□ 0.33
SGMS1-210ENST00000619438 PDE6DO43924 150 aa17.11■□□□□ 0.33
SGMS1-210ENST00000619438 CXorf1O96002 111 aa17.11■□□□□ 0.33
SGMS1-210ENST00000619438 GPX4P36969 197 aaPredicted RBP17.11■□□□□ 0.33
SGMS1-210ENST00000619438 RND2P52198 227 aa17.11■□□□□ 0.33
SGMS1-210ENST00000619438 ERHP84090 104 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms