RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 C8orf46Q8TAG6 207 aa5.02□□□□□ -1.61
RFX3-212ENST00000617270 ZNFX1Q9P2E3 1918 aaKnown RBP5.02□□□□□ -1.61
RFX3-212ENST00000617270 TRAV13-1A0A0B4J241 112 aa5.02□□□□□ -1.61
RFX3-212ENST00000617270 CCL3L1P16619 93 aa5.02□□□□□ -1.61
RFX3-212ENST00000617270 RPL35AP18077 110 aaKnown RBP5.02□□□□□ -1.61
RFX3-212ENST00000617270 SEC11AP67812 179 aa5.02□□□□□ -1.61
RFX3-212ENST00000617270 C6orf226Q5I0X4 101 aa5.02□□□□□ -1.61
RFX3-212ENST00000617270 MRPL52Q86TS9 123 aaKnown RBP5.02□□□□□ -1.61
RFX3-212ENST00000617270 KDM3BQ7LBC6 1761 aa5.02□□□□□ -1.61
RFX3-212ENST00000617270 IGKV2-40A0A087WW87 121 aaPredicted RBP5.02□□□□□ -1.61
RFX3-212ENST00000617270 A0A087WWC5 75 aa5.02□□□□□ -1.61
RFX3-212ENST00000617270 IGKV2D-40P01614 121 aaPredicted RBP5.02□□□□□ -1.61
RFX3-212ENST00000617270 PPBPP02775 128 aa5.02□□□□□ -1.61
RFX3-212ENST00000617270 ABCA4P78363 2273 aa5.02□□□□□ -1.61
RFX3-212ENST00000617270 D6R8Y8 96 aa5.02□□□□□ -1.61
RFX3-212ENST00000617270 RIPPLY2Q5TAB7 128 aa5.02□□□□□ -1.61
RFX3-212ENST00000617270 PVRIGQ6DKI7 326 aa5.02□□□□□ -1.61
RFX3-212ENST00000617270 SNHG12Q9BXW3 62 aa5.02□□□□□ -1.61
RFX3-212ENST00000617270 TM4SF5O14894 197 aa5.02□□□□□ -1.61
RFX3-212ENST00000617270 GUSBP1Q15486 140 aa5.02□□□□□ -1.61
RFX3-212ENST00000617270 SRSF7Q16629 238 aaKnown RBP eCLIP5.02□□□□□ -1.61
RFX3-212ENST00000617270 C9orf153Q5TBE3 101 aa5.02□□□□□ -1.61
RFX3-212ENST00000617270 PRSS22Q9GZN4 317 aa5.02□□□□□ -1.61
RFX3-212ENST00000617270 TMEM126AQ9H061 195 aa5.02□□□□□ -1.61
RFX3-212ENST00000617270 PSG8Q9UQ74 426 aa5.02□□□□□ -1.61
RFX3-212ENST00000617270 INTS1Q8N201 2190 aaKnown RBP5.02□□□□□ -1.61
RFX3-212ENST00000617270 IGHV2OR16-5A0A0B4J2B6 119 aa5.02□□□□□ -1.61
RFX3-212ENST00000617270 ZNF876PQ49A33 203 aa5.02□□□□□ -1.61
RFX3-212ENST00000617270 ZNF525Q8N782 197 aa5.02□□□□□ -1.61
RFX3-212ENST00000617270 CACNG8Q8WXS5 425 aa5.02□□□□□ -1.61
RFX3-212ENST00000617270 DLX4Q92988 240 aaPredicted RBP5.02□□□□□ -1.61
RFX3-212ENST00000617270 GP6Q9HCN6 339 aa5.02□□□□□ -1.61
RFX3-212ENST00000617270 RPL15P61313 204 aaKnown RBP5.02□□□□□ -1.61
RFX3-212ENST00000617270 SPTBP11277 2137 aa5.02□□□□□ -1.61
RFX3-212ENST00000617270 HEATR5BQ9P2D3 2071 aa5.01□□□□□ -1.61
RFX3-212ENST00000617270 HIST1H2BKO60814 126 aa5.01□□□□□ -1.61
RFX3-212ENST00000617270 RAMP3O60896 148 aa5.01□□□□□ -1.61
RFX3-212ENST00000617270 TFF1P04155 84 aa5.01□□□□□ -1.61
RFX3-212ENST00000617270 HIST1H2BJP06899 126 aa5.01□□□□□ -1.61
RFX3-212ENST00000617270 RFPL3SP0C7P2 107 aa5.01□□□□□ -1.61
RFX3-212ENST00000617270 HIST1H2BOP23527 126 aa5.01□□□□□ -1.61
RFX3-212ENST00000617270 HIST1H2BBP33778 126 aa5.01□□□□□ -1.61
RFX3-212ENST00000617270 HIST1H2BDP58876 126 aa5.01□□□□□ -1.61
RFX3-212ENST00000617270 HIST1H2BCP62807 126 aa5.01□□□□□ -1.61
RFX3-212ENST00000617270 HIST2H2BEQ16778 126 aa5.01□□□□□ -1.61
RFX3-212ENST00000617270 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.01□□□□□ -1.61
RFX3-212ENST00000617270 OR10W1Q8NGF6 305 aa5.01□□□□□ -1.61
RFX3-212ENST00000617270 RASL10AQ92737 203 aa5.01□□□□□ -1.61
RFX3-212ENST00000617270 HIST1H2BHQ93079 126 aa5.01□□□□□ -1.61
RFX3-212ENST00000617270 SPSB2Q99619 263 aa5.01□□□□□ -1.61
RFX3-212ENST00000617270 HIST1H2BNQ99877 126 aa5.01□□□□□ -1.61
RFX3-212ENST00000617270 HIST1H2BMQ99879 126 aa5.01□□□□□ -1.61
RFX3-212ENST00000617270 LINC00312Q9Y6C7 94 aa5.01□□□□□ -1.61
RFX3-212ENST00000617270 CD5LO43866 347 aa5.01□□□□□ -1.61
RFX3-212ENST00000617270 CELA3BP08861 270 aa5.01□□□□□ -1.61
RFX3-212ENST00000617270 SPINK8P0C7L1 97 aa5.01□□□□□ -1.61
RFX3-212ENST00000617270 ERCC8Q13216 396 aa5.01□□□□□ -1.61
RFX3-212ENST00000617270 RSPO3Q9BXY4 272 aaPredicted RBP5.01□□□□□ -1.61
RFX3-212ENST00000617270 TOGARAM1Q9Y4F4 1720 aa5.01□□□□□ -1.61
RFX3-212ENST00000617270 PRB1P04280 392 aa5.01□□□□□ -1.61
RFX3-212ENST00000617270 CCL20P78556 96 aa5.01□□□□□ -1.61
RFX3-212ENST00000617270 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.01□□□□□ -1.61
RFX3-212ENST00000617270 ATRAIDQ6UW56 229 aa5.01□□□□□ -1.61
RFX3-212ENST00000617270 CHCHD1Q96BP2 118 aaKnown RBP5.01□□□□□ -1.61
RFX3-212ENST00000617270 MAST2Q6P0Q8 1798 aa5.01□□□□□ -1.61
RFX3-212ENST00000617270 SRSF3P84103 164 aaKnown RBP5.01□□□□□ -1.61
RFX3-212ENST00000617270 OVOL2Q9BRP0 275 aa5.01□□□□□ -1.61
RFX3-212ENST00000617270 SEC16AO15027 2179 aa5.01□□□□□ -1.61
RFX3-212ENST00000617270 TRAV40A0A0B4J280 105 aa5.01□□□□□ -1.61
RFX3-212ENST00000617270 CTSBP07858 339 aa5.01□□□□□ -1.61
RFX3-212ENST00000617270 SLC25A45Q8N413 288 aa5.01□□□□□ -1.61
RFX3-212ENST00000617270 PLEKHB2Q96CS7 222 aa5.01□□□□□ -1.61
RFX3-212ENST00000617270 TCRAP04437 139 aa5.01□□□□□ -1.61
RFX3-212ENST00000617270 CEACAM1P13688 526 aa5.01□□□□□ -1.61
RFX3-212ENST00000617270 PAX8Q06710 450 aa5.01□□□□□ -1.61
RFX3-212ENST00000617270 RTBDNQ9BSG5 229 aaPredicted RBP5.01□□□□□ -1.61
RFX3-212ENST00000617270 FOXD3Q9UJU5 478 aaPredicted RBP5.01□□□□□ -1.61
RFX3-212ENST00000617270 A0A087X0K7 114 aa5□□□□□ -1.61
RFX3-212ENST00000617270 SRRM4A7MD48 611 aaKnown RBP5□□□□□ -1.61
RFX3-212ENST00000617270 C4orf51C9J302 202 aa5□□□□□ -1.61
RFX3-212ENST00000617270 RPL36AP83881 106 aaKnown RBP5□□□□□ -1.61
RFX3-212ENST00000617270 KLF17Q5JT82 389 aaPredicted RBP5□□□□□ -1.61
RFX3-212ENST00000617270 RPL36ALQ969Q0 106 aaKnown RBP5□□□□□ -1.61
RFX3-212ENST00000617270 SMPXQ9UHP9 88 aa5□□□□□ -1.61
RFX3-212ENST00000617270 PILRAQ9UKJ1 303 aa5□□□□□ -1.61
RFX3-212ENST00000617270 J3QW42 95 aa5□□□□□ -1.61
RFX3-212ENST00000617270 UCP1P25874 307 aa5□□□□□ -1.61
RFX3-212ENST00000617270 ACTL10Q5JWF8 245 aa5□□□□□ -1.61
RFX3-212ENST00000617270 TSKUQ8WUA8 353 aa5□□□□□ -1.61
RFX3-212ENST00000617270 NEU4Q8WWR8 484 aaPredicted RBP5□□□□□ -1.61
RFX3-212ENST00000617270 TIMM21Q9BVV7 248 aa5□□□□□ -1.61
RFX3-212ENST00000617270 METRNQ9UJH8 293 aa5□□□□□ -1.61
RFX3-212ENST00000617270 C15orf61A6NNL5 157 aa5□□□□□ -1.61
RFX3-212ENST00000617270 DEFB130BP0DP73 79 aa5□□□□□ -1.61
RFX3-212ENST00000617270 DEFB130AP0DP74 79 aa5□□□□□ -1.61
RFX3-212ENST00000617270 PRIMA1Q86XR5 153 aa5□□□□□ -1.61
RFX3-212ENST00000617270 CACNA1DQ01668 2161 aa5□□□□□ -1.61
RFX3-212ENST00000617270 TCTEX1D4Q5JR98 221 aa5□□□□□ -1.61
RFX3-212ENST00000617270 FAM90A2PQ658T7 463 aa5□□□□□ -1.61
RFX3-212ENST00000617270 FDCSPQ8NFU4 85 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms