RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 ACSM6Q6P461 480 aa12.05□□□□□ -0.48
PCDHGC3-204ENST00000617222 UBAC2Q8NBM4 344 aa12.05□□□□□ -0.48
PCDHGC3-204ENST00000617222 OR4F17Q8NGA8 305 aa12.05□□□□□ -0.48
PCDHGC3-204ENST00000617222 ASB13Q8WXK3 278 aa12.05□□□□□ -0.48
PCDHGC3-204ENST00000617222 DPF1Q92782 380 aa12.05□□□□□ -0.48
PCDHGC3-204ENST00000617222 RAX2Q96IS3 184 aa12.05□□□□□ -0.48
PCDHGC3-204ENST00000617222 OR4F4Q96R69 305 aa12.05□□□□□ -0.48
PCDHGC3-204ENST00000617222 RANGRFQ9HD47 186 aaPredicted RBP12.05□□□□□ -0.48
PCDHGC3-204ENST00000617222 IGHV4OR15-8A0A075B7B6 117 aa12.04□□□□□ -0.48
PCDHGC3-204ENST00000617222 A0A087WW49 117 aa12.04□□□□□ -0.48
PCDHGC3-204ENST00000617222 TRAV14DV4A0A0A6YYC5 116 aa12.04□□□□□ -0.48
PCDHGC3-204ENST00000617222 PMS2P5A8MQ11 134 aa12.04□□□□□ -0.48
PCDHGC3-204ENST00000617222 PPP5D1E7EU14 171 aa12.04□□□□□ -0.48
PCDHGC3-204ENST00000617222 GPR183P32249 361 aa12.04□□□□□ -0.48
PCDHGC3-204ENST00000617222 GPX4P36969 197 aaPredicted RBP12.04□□□□□ -0.48
PCDHGC3-204ENST00000617222 CD69Q07108 199 aa12.04□□□□□ -0.48
PCDHGC3-204ENST00000617222 Q5BKY6 102 aa12.04□□□□□ -0.48
PCDHGC3-204ENST00000617222 OR8G2PQ6IF36 304 aa12.04□□□□□ -0.48
PCDHGC3-204ENST00000617222 ETFRF1Q6IPR1 90 aa12.04□□□□□ -0.48
PCDHGC3-204ENST00000617222 PRSS54Q6PEW0 395 aa12.04□□□□□ -0.48
PCDHGC3-204ENST00000617222 SLC16A13Q7RTY0 426 aa12.04□□□□□ -0.48
PCDHGC3-204ENST00000617222 THAP6Q8TBB0 222 aa12.04□□□□□ -0.48
PCDHGC3-204ENST00000617222 ZC4H2Q9NQZ6 224 aa12.04□□□□□ -0.48
PCDHGC3-204ENST00000617222 LYRM2Q9NU23 88 aaPredicted RBP12.04□□□□□ -0.48
PCDHGC3-204ENST00000617222 MRPL36Q9P0J6 103 aaKnown RBP12.04□□□□□ -0.48
PCDHGC3-204ENST00000617222 MBD2Q9UBB5 411 aa12.04□□□□□ -0.48
PCDHGC3-204ENST00000617222 OR2T8A6NH00 312 aa12.03□□□□□ -0.48
PCDHGC3-204ENST00000617222 F8W735 103 aaPredicted RBP12.03□□□□□ -0.48
PCDHGC3-204ENST00000617222 LINC01619G3V211 115 aa12.03□□□□□ -0.48
PCDHGC3-204ENST00000617222 TSPAN15O95858 294 aa12.03□□□□□ -0.48
PCDHGC3-204ENST00000617222 PET100P0DJ07 73 aa12.03□□□□□ -0.48
PCDHGC3-204ENST00000617222 SLC25A4P12235 298 aa12.03□□□□□ -0.48
PCDHGC3-204ENST00000617222 MYCNOSP40205 109 aa12.03□□□□□ -0.48
PCDHGC3-204ENST00000617222 P2RY1P47900 373 aa12.03□□□□□ -0.48
PCDHGC3-204ENST00000617222 ZNF616Q08AN1 781 aa12.03□□□□□ -0.48
PCDHGC3-204ENST00000617222 FAM209BQ5JX69 171 aa12.03□□□□□ -0.48
PCDHGC3-204ENST00000617222 TMEM252Q8N6L7 170 aa12.03□□□□□ -0.48
PCDHGC3-204ENST00000617222 OR2T35Q8NGX2 323 aa12.03□□□□□ -0.48
PCDHGC3-204ENST00000617222 TXN2Q99757 166 aa12.03□□□□□ -0.48
PCDHGC3-204ENST00000617222 IGSF23A1L1A6 192 aa12.02□□□□□ -0.49
PCDHGC3-204ENST00000617222 PRSS46E5RG02 174 aa12.02□□□□□ -0.49
PCDHGC3-204ENST00000617222 BMPR1BO00238 502 aa12.02□□□□□ -0.49
PCDHGC3-204ENST00000617222 CST7O76096 145 aa12.02□□□□□ -0.49
PCDHGC3-204ENST00000617222 PF4P02776 101 aa12.02□□□□□ -0.49
PCDHGC3-204ENST00000617222 FCGR2BP31994 310 aaPredicted RBP12.02□□□□□ -0.49
PCDHGC3-204ENST00000617222 ARL3P36405 182 aa12.02□□□□□ -0.49
PCDHGC3-204ENST00000617222 NPBWR1P48145 328 aa12.02□□□□□ -0.49
PCDHGC3-204ENST00000617222 RND2P52198 227 aa12.02□□□□□ -0.49
PCDHGC3-204ENST00000617222 FGL1Q08830 312 aa12.02□□□□□ -0.49
PCDHGC3-204ENST00000617222 ARL16Q0P5N6 197 aa12.02□□□□□ -0.49
PCDHGC3-204ENST00000617222 HAPLN4Q86UW8 402 aa12.02□□□□□ -0.49
PCDHGC3-204ENST00000617222 OR10P1Q8NGE3 313 aa12.02□□□□□ -0.49
PCDHGC3-204ENST00000617222 OR4X1Q8NH49 305 aa12.02□□□□□ -0.49
PCDHGC3-204ENST00000617222 CACNG8Q8WXS5 425 aa12.02□□□□□ -0.49
PCDHGC3-204ENST00000617222 NPIPB3Q92617 1050 aa12.02□□□□□ -0.49
PCDHGC3-204ENST00000617222 ACY3Q96HD9 319 aa12.02□□□□□ -0.49
PCDHGC3-204ENST00000617222 SLC35E1Q96K37 410 aa12.02□□□□□ -0.49
PCDHGC3-204ENST00000617222 GAR1Q9NY12 217 aaKnown RBP12.02□□□□□ -0.49
PCDHGC3-204ENST00000617222 TGOLN2O43493 480 aa12.01□□□□□ -0.49
PCDHGC3-204ENST00000617222 GNG7O60262 68 aa12.01□□□□□ -0.49
PCDHGC3-204ENST00000617222 GGCTO75223 188 aaKnown RBP12.01□□□□□ -0.49
PCDHGC3-204ENST00000617222 OR2C1O95371 312 aa12.01□□□□□ -0.49
PCDHGC3-204ENST00000617222 LYL1P12980 280 aa12.01□□□□□ -0.49
PCDHGC3-204ENST00000617222 SLURP1P55000 103 aa12.01□□□□□ -0.49
PCDHGC3-204ENST00000617222 GAMTQ14353 236 aa12.01□□□□□ -0.49
PCDHGC3-204ENST00000617222 TMEM217Q8N7C4 229 aa12.01□□□□□ -0.49
PCDHGC3-204ENST00000617222 DCUN1D4Q92564 292 aa12.01□□□□□ -0.49
PCDHGC3-204ENST00000617222 BSCL2Q96G97 398 aaPredicted RBP12.01□□□□□ -0.49
PCDHGC3-204ENST00000617222 ATP6V0BQ99437 205 aa12.01□□□□□ -0.49
PCDHGC3-204ENST00000617222 CHRDL1Q9BU40 450 aa12.01□□□□□ -0.49
PCDHGC3-204ENST00000617222 SLC25A31Q9H0C2 315 aa12.01□□□□□ -0.49
PCDHGC3-204ENST00000617222 SMLR1H3BR10 107 aa12□□□□□ -0.49
PCDHGC3-204ENST00000617222 NUPL2O15504 423 aaKnown RBP12□□□□□ -0.49
PCDHGC3-204ENST00000617222 CLN5O75503 358 aa12□□□□□ -0.49
PCDHGC3-204ENST00000617222 CTSGP08311 255 aa12□□□□□ -0.49
PCDHGC3-204ENST00000617222 ZP3P21754 424 aa12□□□□□ -0.49
PCDHGC3-204ENST00000617222 HOXD3P31249 432 aaPredicted RBP12□□□□□ -0.49
PCDHGC3-204ENST00000617222 ADMP35318 185 aa12□□□□□ -0.49
PCDHGC3-204ENST00000617222 SULT1A1P50225 295 aa12□□□□□ -0.49
PCDHGC3-204ENST00000617222 FHL3Q13643 280 aa12□□□□□ -0.49
PCDHGC3-204ENST00000617222 RPEL1Q2QD12 228 aa12□□□□□ -0.49
PCDHGC3-204ENST00000617222 ACOT7LQ6ZUV0 252 aa12□□□□□ -0.49
PCDHGC3-204ENST00000617222 STX12Q86Y82 276 aa12□□□□□ -0.49
PCDHGC3-204ENST00000617222 TMEM116Q8NCL8 245 aa12□□□□□ -0.49
PCDHGC3-204ENST00000617222 IGHV3-35A0A0C4DH35 117 aa11.99□□□□□ -0.49
PCDHGC3-204ENST00000617222 SMCO3A2RU48 225 aa11.99□□□□□ -0.49
PCDHGC3-204ENST00000617222 RPL12P30050 165 aaKnown RBP11.99□□□□□ -0.49
PCDHGC3-204ENST00000617222 DLK1P80370 383 aa11.99□□□□□ -0.49
PCDHGC3-204ENST00000617222 EWSR1Q01844 656 aaKnown RBP eCLIP11.99□□□□□ -0.49
PCDHGC3-204ENST00000617222 NHLH2Q02577 135 aa11.99□□□□□ -0.49
PCDHGC3-204ENST00000617222 SLC38A11Q08AI6 406 aa11.99□□□□□ -0.49
PCDHGC3-204ENST00000617222 SPSB3Q6PJ21 355 aa11.99□□□□□ -0.49
PCDHGC3-204ENST00000617222 ST6GAL2Q96JF0 529 aa11.99□□□□□ -0.49
PCDHGC3-204ENST00000617222 TRAV30A0A087WSZ9 112 aa11.98□□□□□ -0.49
PCDHGC3-204ENST00000617222 G3V3Q6 166 aa11.98□□□□□ -0.49
PCDHGC3-204ENST00000617222 OR10J1P30954 320 aa11.98□□□□□ -0.49
PCDHGC3-204ENST00000617222 S100A11P31949 105 aa11.98□□□□□ -0.49
PCDHGC3-204ENST00000617222 TIGITQ495A1 244 aa11.98□□□□□ -0.49
PCDHGC3-204ENST00000617222 LINC00482Q8N8I6 264 aa11.98□□□□□ -0.49
PCDHGC3-204ENST00000617222 DLX4Q92988 240 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms