RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 NF1P21359 2839 aa6.2□□□□□ -1.42
NEK3-207ENST00000617054 TRAV40A0A0B4J280 105 aa6.2□□□□□ -1.42
NEK3-207ENST00000617054 NUDT19A8MXV4 375 aa6.2□□□□□ -1.42
NEK3-207ENST00000617054 TEX22C9J3V5 150 aa6.2□□□□□ -1.42
NEK3-207ENST00000617054 AVPP01185 164 aa6.2□□□□□ -1.42
NEK3-207ENST00000617054 BPIFB3P59826 476 aa6.2□□□□□ -1.42
NEK3-207ENST00000617054 PBDC1Q9BVG4 233 aa6.2□□□□□ -1.42
NEK3-207ENST00000617054 PARD6GQ9BYG4 376 aaPredicted RBP6.2□□□□□ -1.42
NEK3-207ENST00000617054 SLC35B3Q9H1N7 401 aa6.2□□□□□ -1.42
NEK3-207ENST00000617054 KIAA1456Q9P272 454 aa6.2□□□□□ -1.42
NEK3-207ENST00000617054 ITPR3Q14573 2671 aa6.19□□□□□ -1.42
NEK3-207ENST00000617054 A0A1W2PPV4 95 aa6.19□□□□□ -1.42
NEK3-207ENST00000617054 M0R036 132 aa6.19□□□□□ -1.42
NEK3-207ENST00000617054 NBR2O15453 112 aa6.19□□□□□ -1.42
NEK3-207ENST00000617054 CDC34P49427 236 aaPredicted RBP6.19□□□□□ -1.42
NEK3-207ENST00000617054 NDPQ00604 133 aa6.19□□□□□ -1.42
NEK3-207ENST00000617054 CD69Q07108 199 aa6.19□□□□□ -1.42
NEK3-207ENST00000617054 FXYD3Q14802 87 aa6.19□□□□□ -1.42
NEK3-207ENST00000617054 SVBPQ8N300 66 aa6.19□□□□□ -1.42
NEK3-207ENST00000617054 OR4A5Q8NH83 315 aa6.19□□□□□ -1.42
NEK3-207ENST00000617054 MBD3L1Q8WWY6 194 aa6.19□□□□□ -1.42
NEK3-207ENST00000617054 FANCD2OSQ96PS1 177 aa6.19□□□□□ -1.42
NEK3-207ENST00000617054 UHRF2Q96PU4 802 aa6.19□□□□□ -1.42
NEK3-207ENST00000617054 TIMM9Q9Y5J7 89 aa6.19□□□□□ -1.42
NEK3-207ENST00000617054 LINC01548A6NM66 108 aa6.19□□□□□ -1.42
NEK3-207ENST00000617054 PAGE4O60829 102 aa6.19□□□□□ -1.42
NEK3-207ENST00000617054 PRB4P10163 310 aaPredicted RBP6.19□□□□□ -1.42
NEK3-207ENST00000617054 UBE2E1P51965 193 aa6.19□□□□□ -1.42
NEK3-207ENST00000617054 RND2P52198 227 aa6.19□□□□□ -1.42
NEK3-207ENST00000617054 CLEC12BQ2HXU8 276 aa6.19□□□□□ -1.42
NEK3-207ENST00000617054 C10orf91Q5T1B1 145 aa6.19□□□□□ -1.42
NEK3-207ENST00000617054 MORN5Q5VZ52 161 aa6.19□□□□□ -1.42
NEK3-207ENST00000617054 SLC16A13Q7RTY0 426 aa6.19□□□□□ -1.42
NEK3-207ENST00000617054 ACTR3CQ9C0K3 210 aaPredicted RBP6.19□□□□□ -1.42
NEK3-207ENST00000617054 TRAV5A0A0B4J249 113 aa6.19□□□□□ -1.42
NEK3-207ENST00000617054 A0A1W2PN81 502 aa6.19□□□□□ -1.42
NEK3-207ENST00000617054 VWC2LB2RUY7 222 aa6.19□□□□□ -1.42
NEK3-207ENST00000617054 DNASE2O00115 360 aaPredicted RBP6.19□□□□□ -1.42
NEK3-207ENST00000617054 CYB5BO43169 146 aa6.19□□□□□ -1.42
NEK3-207ENST00000617054 IGHV3-23P01764 117 aa6.19□□□□□ -1.42
NEK3-207ENST00000617054 SRP19P09132 144 aaKnown RBP6.19□□□□□ -1.42
NEK3-207ENST00000617054 LINC00869P0C866 280 aa6.19□□□□□ -1.42
NEK3-207ENST00000617054 ARL14EPLP0DKL9 152 aa6.19□□□□□ -1.42
NEK3-207ENST00000617054 TMEM11P17152 192 aa6.19□□□□□ -1.42
NEK3-207ENST00000617054 CHRNA7P36544 502 aa6.19□□□□□ -1.42
NEK3-207ENST00000617054 ZNF674Q2M3X9 581 aa6.19□□□□□ -1.42
NEK3-207ENST00000617054 ACOT6Q3I5F7 207 aaPredicted RBP6.19□□□□□ -1.42
NEK3-207ENST00000617054 SOHLH1Q5JUK2 328 aa6.19□□□□□ -1.42
NEK3-207ENST00000617054 FAM78BQ5VT40 261 aa6.19□□□□□ -1.42
NEK3-207ENST00000617054 OR5T1Q8NG75 326 aa6.19□□□□□ -1.42
NEK3-207ENST00000617054 OR51G1Q8NGK1 321 aa6.19□□□□□ -1.42
NEK3-207ENST00000617054 GGACTQ9BVM4 153 aa6.19□□□□□ -1.42
NEK3-207ENST00000617054 C7orf69Q9H7B7 122 aa6.19□□□□□ -1.42
NEK3-207ENST00000617054 LINC00527Q9UJ94 153 aa6.19□□□□□ -1.42
NEK3-207ENST00000617054 FLNAP21333 2647 aaKnown RBP6.18□□□□□ -1.42
NEK3-207ENST00000617054 CTXND1A0A1B0GTU2 59 aa6.18□□□□□ -1.42
NEK3-207ENST00000617054 CX3CL1P78423 397 aa6.18□□□□□ -1.42
NEK3-207ENST00000617054 DPPA3Q6W0C5 159 aa6.18□□□□□ -1.42
NEK3-207ENST00000617054 MIR17HGQ75NE6 70 aa6.18□□□□□ -1.42
NEK3-207ENST00000617054 TMEM144Q7Z5S9 345 aa6.18□□□□□ -1.42
NEK3-207ENST00000617054 LFNGQ8NES3 379 aa6.18□□□□□ -1.42
NEK3-207ENST00000617054 ISOC2Q96AB3 205 aa6.18□□□□□ -1.42
NEK3-207ENST00000617054 UNKLQ9H9P5 680 aaKnown RBP6.18□□□□□ -1.42
NEK3-207ENST00000617054 RPS10P5Q9NQ39 176 aa6.18□□□□□ -1.42
NEK3-207ENST00000617054 HIF1ANQ9NWT6 349 aa6.18□□□□□ -1.42
NEK3-207ENST00000617054 CARHSP1Q9Y2V2 147 aaKnown RBP6.18□□□□□ -1.42
NEK3-207ENST00000617054 LOC102723971A0A1B0GUV8 181 aa6.18□□□□□ -1.42
NEK3-207ENST00000617054 NPFFO15130 113 aa6.18□□□□□ -1.42
NEK3-207ENST00000617054 MT-CO2P00403 227 aa6.18□□□□□ -1.42
NEK3-207ENST00000617054 HBE1P02100 147 aa6.18□□□□□ -1.42
NEK3-207ENST00000617054 OR10J4P0C629 311 aa6.18□□□□□ -1.42
NEK3-207ENST00000617054 BCL2P10415 239 aa6.18□□□□□ -1.42
NEK3-207ENST00000617054 C5orf64Q2M2E5 130 aa6.18□□□□□ -1.42
NEK3-207ENST00000617054 AWAT1Q58HT5 328 aa6.18□□□□□ -1.42
NEK3-207ENST00000617054 CST9LP1Q5W188 147 aa6.18□□□□□ -1.42
NEK3-207ENST00000617054 COMMD1Q8N668 190 aa6.18□□□□□ -1.42
NEK3-207ENST00000617054 KIR3DL3Q8N743 410 aa6.18□□□□□ -1.42
NEK3-207ENST00000617054 OR2T10Q8NGZ9 312 aa6.18□□□□□ -1.42
NEK3-207ENST00000617054 TMEM37Q8WXS4 190 aa6.18□□□□□ -1.42
NEK3-207ENST00000617054 HSPB9Q9BQS6 159 aa6.18□□□□□ -1.42
NEK3-207ENST00000617054 AURKAIP1Q9NWT8 199 aaPredicted RBP6.18□□□□□ -1.42
NEK3-207ENST00000617054 AKAP9Q99996 3911 aa6.18□□□□□ -1.42
NEK3-207ENST00000617054 A0A0U1RQK1 487 aa6.17□□□□□ -1.42
NEK3-207ENST00000617054 CD81P60033 236 aa6.17□□□□□ -1.42
NEK3-207ENST00000617054 LY6EQ16553 131 aa6.17□□□□□ -1.42
NEK3-207ENST00000617054 SLC45A2Q9UMX9 530 aa6.17□□□□□ -1.42
NEK3-207ENST00000617054 IGKV1D-37A0A075B6S9 117 aa6.17□□□□□ -1.42
NEK3-207ENST00000617054 TRAV1-1A0A0B4J248 108 aa6.17□□□□□ -1.42
NEK3-207ENST00000617054 ZNF727A8MUV8 499 aa6.17□□□□□ -1.42
NEK3-207ENST00000617054 FAM229AH3BQW9 127 aa6.17□□□□□ -1.42
NEK3-207ENST00000617054 LY86O95711 162 aa6.17□□□□□ -1.42
NEK3-207ENST00000617054 MBP02144 154 aa6.17□□□□□ -1.42
NEK3-207ENST00000617054 ATP5G3P48201 142 aa6.17□□□□□ -1.42
NEK3-207ENST00000617054 SUB1P53999 127 aaKnown RBP eCLIP6.17□□□□□ -1.42
NEK3-207ENST00000617054 PRR20EP86478 221 aa6.17□□□□□ -1.42
NEK3-207ENST00000617054 PRR20CP86479 221 aa6.17□□□□□ -1.42
NEK3-207ENST00000617054 PRR20DP86480 221 aa6.17□□□□□ -1.42
NEK3-207ENST00000617054 PRR20BP86481 221 aa6.17□□□□□ -1.42
NEK3-207ENST00000617054 PRR20AP86496 221 aa6.17□□□□□ -1.42
NEK3-207ENST00000617054 PAX8Q06710 450 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms