RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 CFHR4Q92496 578 aa12.58□□□□□ -0.4
NR1H3-235ENST00000616973 GALR1P47211 349 aa12.57□□□□□ -0.4
NR1H3-235ENST00000616973 FBXL15Q9H469 300 aa12.57□□□□□ -0.4
NR1H3-235ENST00000616973 LY96Q9Y6Y9 160 aa12.57□□□□□ -0.4
NR1H3-235ENST00000616973 C9JCJ5 164 aa12.56□□□□□ -0.4
NR1H3-235ENST00000616973 PPP1R2P9O14990 202 aa12.56□□□□□ -0.4
NR1H3-235ENST00000616973 SRP14P37108 136 aaKnown RBP12.56□□□□□ -0.4
NR1H3-235ENST00000616973 CDKN1AP38936 164 aa12.56□□□□□ -0.4
NR1H3-235ENST00000616973 EFNA4P52798 201 aa12.56□□□□□ -0.4
NR1H3-235ENST00000616973 S100A12P80511 92 aa12.56□□□□□ -0.4
NR1H3-235ENST00000616973 FABP9Q0Z7S8 132 aa12.56□□□□□ -0.4
NR1H3-235ENST00000616973 SRSF12Q8WXF0 261 aaKnown RBP12.56□□□□□ -0.4
NR1H3-235ENST00000616973 TRGV9Q99603 122 aa12.56□□□□□ -0.4
NR1H3-235ENST00000616973 UBTD1Q9HAC8 227 aa12.56□□□□□ -0.4
NR1H3-235ENST00000616973 MRPL36Q9P0J6 103 aaKnown RBP12.56□□□□□ -0.4
NR1H3-235ENST00000616973 ZMAT5Q9UDW3 170 aaKnown RBP12.56□□□□□ -0.4
NR1H3-235ENST00000616973 F11RQ9Y624 299 aaKnown RBP12.56□□□□□ -0.4
NR1H3-235ENST00000616973 CACNA1AO00555 2505 aa12.56□□□□□ -0.4
NR1H3-235ENST00000616973 TRBV20OR9-2A0A075B6H5 130 aa12.56□□□□□ -0.4
NR1H3-235ENST00000616973 A0A1W2PRE2 83 aa12.56□□□□□ -0.4
NR1H3-235ENST00000616973 OR7C2O60412 319 aa12.56□□□□□ -0.4
NR1H3-235ENST00000616973 BPIFB3P59826 476 aa12.56□□□□□ -0.4
NR1H3-235ENST00000616973 SSX2Q16385 188 aa12.56□□□□□ -0.4
NR1H3-235ENST00000616973 TMEM116Q8NCL8 245 aa12.56□□□□□ -0.4
NR1H3-235ENST00000616973 NPBQ8NG41 125 aa12.56□□□□□ -0.4
NR1H3-235ENST00000616973 C22orf15Q8WYQ4 148 aa12.56□□□□□ -0.4
NR1H3-235ENST00000616973 MISP3Q96FF7 219 aa12.56□□□□□ -0.4
NR1H3-235ENST00000616973 FAM167A-AS1Q96KT0 104 aa12.56□□□□□ -0.4
NR1H3-235ENST00000616973 IMMP2LQ96T52 175 aa12.56□□□□□ -0.4
NR1H3-235ENST00000616973 SLC25A2Q9BXI2 301 aa12.56□□□□□ -0.4
NR1H3-235ENST00000616973 SRD5A3Q9H8P0 318 aa12.56□□□□□ -0.4
NR1H3-235ENST00000616973 OOSP1A8MZH6 123 aa12.55□□□□□ -0.4
NR1H3-235ENST00000616973 COX7A2P2O60397 106 aa12.55□□□□□ -0.4
NR1H3-235ENST00000616973 NDUFA3O95167 84 aa12.55□□□□□ -0.4
NR1H3-235ENST00000616973 TRGC2P03986 189 aa12.55□□□□□ -0.4
NR1H3-235ENST00000616973 C10orf113Q5VZT2 155 aa12.55□□□□□ -0.4
NR1H3-235ENST00000616973 C19orf84I3L1E1 186 aa12.54□□□□□ -0.4
NR1H3-235ENST00000616973 GGCTO75223 188 aaKnown RBP12.54□□□□□ -0.4
NR1H3-235ENST00000616973 MOSP00540 346 aa12.54□□□□□ -0.4
NR1H3-235ENST00000616973 S100A8P05109 93 aa12.54□□□□□ -0.4
NR1H3-235ENST00000616973 ZNF90Q03938 601 aa12.54□□□□□ -0.4
NR1H3-235ENST00000616973 KLRD1Q13241 179 aa12.54□□□□□ -0.4
NR1H3-235ENST00000616973 PATE2Q6UY27 113 aa12.54□□□□□ -0.4
NR1H3-235ENST00000616973 OR4X1Q8NH49 305 aa12.54□□□□□ -0.4
NR1H3-235ENST00000616973 TNFRSF19Q9NS68 423 aa12.54□□□□□ -0.4
NR1H3-235ENST00000616973 NBASA2RRP1 2371 aa12.54□□□□□ -0.4
NR1H3-235ENST00000616973 SMG1Q96Q15 3661 aaKnown RBP12.54□□□□□ -0.4
NR1H3-235ENST00000616973 ELOA3CA0A087WX78 387 aaPredicted RBP12.54□□□□□ -0.4
NR1H3-235ENST00000616973 FCN1O00602 326 aa12.54□□□□□ -0.4
NR1H3-235ENST00000616973 PHOX2AO14813 284 aa12.54□□□□□ -0.4
NR1H3-235ENST00000616973 NBR2O15453 112 aa12.54□□□□□ -0.4
NR1H3-235ENST00000616973 PLGLAQ15195 96 aa12.54□□□□□ -0.4
NR1H3-235ENST00000616973 VMO1Q7Z5L0 202 aa12.54□□□□□ -0.4
NR1H3-235ENST00000616973 TPRP12270 2363 aaKnown RBP12.54□□□□□ -0.4
NR1H3-235ENST00000616973 HIST1H2BKO60814 126 aa12.53□□□□□ -0.4
NR1H3-235ENST00000616973 NDUFS7O75251 213 aa12.53□□□□□ -0.4
NR1H3-235ENST00000616973 HIST1H2BJP06899 126 aa12.53□□□□□ -0.4
NR1H3-235ENST00000616973 HIST1H2BOP23527 126 aa12.53□□□□□ -0.4
NR1H3-235ENST00000616973 HIST1H2BBP33778 126 aa12.53□□□□□ -0.4
NR1H3-235ENST00000616973 HIST1H2BDP58876 126 aa12.53□□□□□ -0.4
NR1H3-235ENST00000616973 HIST1H2BCP62807 126 aa12.53□□□□□ -0.4
NR1H3-235ENST00000616973 MMDQ15546 238 aa12.53□□□□□ -0.4
NR1H3-235ENST00000616973 HIST2H2BEQ16778 126 aa12.53□□□□□ -0.4
NR1H3-235ENST00000616973 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.53□□□□□ -0.4
NR1H3-235ENST00000616973 MINOS1Q5TGZ0 78 aa12.53□□□□□ -0.4
NR1H3-235ENST00000616973 MORN5Q5VZ52 161 aa12.53□□□□□ -0.4
NR1H3-235ENST00000616973 CCDC144NLQ6NUI1 221 aa12.53□□□□□ -0.4
NR1H3-235ENST00000616973 KCNIP4Q6PIL6 250 aa12.53□□□□□ -0.4
NR1H3-235ENST00000616973 LHFPL4Q7Z7J7 247 aa12.53□□□□□ -0.4
NR1H3-235ENST00000616973 NECAP1Q8NC96 275 aa12.53□□□□□ -0.4
NR1H3-235ENST00000616973 OCC1Q8TAD7 63 aa12.53□□□□□ -0.4
NR1H3-235ENST00000616973 HIST1H2BHQ93079 126 aa12.53□□□□□ -0.4
NR1H3-235ENST00000616973 SFRP2Q96HF1 295 aa12.53□□□□□ -0.4
NR1H3-235ENST00000616973 HIST1H2BNQ99877 126 aa12.53□□□□□ -0.4
NR1H3-235ENST00000616973 HIST1H2BMQ99879 126 aa12.53□□□□□ -0.4
NR1H3-235ENST00000616973 ELOVL1Q9BW60 279 aa12.53□□□□□ -0.4
NR1H3-235ENST00000616973 HILPDAQ9Y5L2 63 aa12.53□□□□□ -0.4
NR1H3-235ENST00000616973 MINOS1-NBL1R4GNA1 71 aa12.53□□□□□ -0.4
NR1H3-235ENST00000616973 MDFIC2A0A1B0GVS7 189 aa12.52□□□□□ -0.4
NR1H3-235ENST00000616973 ZNF98A6NK75 572 aa12.52□□□□□ -0.4
NR1H3-235ENST00000616973 IGHV3-48P01763 117 aa12.52□□□□□ -0.4
NR1H3-235ENST00000616973 TYMSP04818 313 aa12.52□□□□□ -0.4
NR1H3-235ENST00000616973 HOXA5P20719 270 aa12.52□□□□□ -0.4
NR1H3-235ENST00000616973 ZFP36P26651 326 aaKnown RBP12.52□□□□□ -0.4
NR1H3-235ENST00000616973 LURAP1LQ8IV03 231 aa12.52□□□□□ -0.4
NR1H3-235ENST00000616973 OR5T1Q8NG75 326 aa12.52□□□□□ -0.4
NR1H3-235ENST00000616973 OR5AU1Q8NGC0 362 aa12.52□□□□□ -0.4
NR1H3-235ENST00000616973 OR2T10Q8NGZ9 312 aa12.52□□□□□ -0.4
NR1H3-235ENST00000616973 EAF1Q96JC9 268 aaPredicted RBP12.52□□□□□ -0.4
NR1H3-235ENST00000616973 BTF3L4Q96K17 158 aa12.52□□□□□ -0.4
NR1H3-235ENST00000616973 TCEAL7Q9BRU2 100 aa12.52□□□□□ -0.4
NR1H3-235ENST00000616973 SIRPDQ9H106 197 aa12.52□□□□□ -0.4
NR1H3-235ENST00000616973 ZNF355PQ9NSJ1 428 aa12.52□□□□□ -0.4
NR1H3-235ENST00000616973 DMRT1Q9Y5R6 373 aa12.52□□□□□ -0.4
NR1H3-235ENST00000616973 OVOL3O00110 214 aa12.52□□□□□ -0.41
NR1H3-235ENST00000616973 HOXB4P17483 251 aaPredicted RBP12.52□□□□□ -0.41
NR1H3-235ENST00000616973 PLP1P60201 277 aa12.52□□□□□ -0.41
NR1H3-235ENST00000616973 LCN2P80188 198 aa12.52□□□□□ -0.41
NR1H3-235ENST00000616973 FOXL1Q12952 345 aa12.52□□□□□ -0.41
NR1H3-235ENST00000616973 TRAV5A0A0B4J249 113 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms