RNA–Protein interactions for RNA: ENST00000616237.1

LHX1-202, Transcript of LIM homeobox 1, humanhuman

TSL 1 (best)

Gene LHX1, Length 1,364 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1-202ENST00000616237 NDUFB6O95139 128 aa12.77□□□□□ -0.37
LHX1-202ENST00000616237 SFT2D2O95562 160 aa12.77□□□□□ -0.37
LHX1-202ENST00000616237 TMEM50AO95807 157 aa12.77□□□□□ -0.37
LHX1-202ENST00000616237 VAMP1P23763 118 aa12.77□□□□□ -0.37
LHX1-202ENST00000616237 HTR2BP41595 481 aa12.77□□□□□ -0.37
LHX1-202ENST00000616237 INPP1P49441 399 aa12.77□□□□□ -0.37
LHX1-202ENST00000616237 SRPXP78539 464 aa12.77□□□□□ -0.37
LHX1-202ENST00000616237 TNFRSF9Q07011 255 aa12.77□□□□□ -0.37
LHX1-202ENST00000616237 SMCO1Q147U7 214 aa12.77□□□□□ -0.37
LHX1-202ENST00000616237 CENPSQ8N2Z9 138 aa12.77□□□□□ -0.37
LHX1-202ENST00000616237 DUSP18Q8NEJ0 188 aa12.77□□□□□ -0.37
LHX1-202ENST00000616237 OR10C1Q96KK4 312 aa12.77□□□□□ -0.37
LHX1-202ENST00000616237 HSPB7Q9UBY9 170 aa12.77□□□□□ -0.37
LHX1-202ENST00000616237 FLVCR2Q9UPI3 526 aa12.77□□□□□ -0.37
LHX1-202ENST00000616237 NAP1L6A6NFF2 107 aa12.76□□□□□ -0.37
LHX1-202ENST00000616237 C15orf62A8K5M9 175 aa12.76□□□□□ -0.37
LHX1-202ENST00000616237 PITX3O75364 302 aa12.76□□□□□ -0.37
LHX1-202ENST00000616237 OPRK1P41145 380 aa12.76□□□□□ -0.37
LHX1-202ENST00000616237 NPBWR1P48145 328 aa12.76□□□□□ -0.37
LHX1-202ENST00000616237 RELQ04864 619 aaPredicted RBP12.76□□□□□ -0.37
LHX1-202ENST00000616237 C2orf83Q53S99 150 aa12.76□□□□□ -0.37
LHX1-202ENST00000616237 SLC24A4Q8NFF2 622 aa12.76□□□□□ -0.37
LHX1-202ENST00000616237 A0A1B0GU03 582 aa12.75□□□□□ -0.37
LHX1-202ENST00000616237 DUXBA0A1W2PPF3 345 aa12.75□□□□□ -0.37
LHX1-202ENST00000616237 A6NHS1 94 aa12.75□□□□□ -0.37
LHX1-202ENST00000616237 PLA2G10O15496 165 aa12.75□□□□□ -0.37
LHX1-202ENST00000616237 TOMM20LQ6UXN7 152 aa12.75□□□□□ -0.37
LHX1-202ENST00000616237 LINC00322Q6ZN03 302 aaPredicted RBP12.75□□□□□ -0.37
LHX1-202ENST00000616237 DEFB125Q8N687 156 aa12.75□□□□□ -0.37
LHX1-202ENST00000616237 RBKSQ9H477 322 aa12.75□□□□□ -0.37
LHX1-202ENST00000616237 IGHV3-49A0A0A0MS15 119 aa12.74□□□□□ -0.37
LHX1-202ENST00000616237 TRAV25A0A0B4J276 109 aa12.74□□□□□ -0.37
LHX1-202ENST00000616237 CLN5O75503 358 aa12.74□□□□□ -0.37
LHX1-202ENST00000616237 YIF1AO95070 293 aa12.74□□□□□ -0.37
LHX1-202ENST00000616237 OR4X1Q8NH49 305 aa12.74□□□□□ -0.37
LHX1-202ENST00000616237 TM2D3Q9BRN9 247 aa12.74□□□□□ -0.37
LHX1-202ENST00000616237 ZFAND3Q9H8U3 227 aa12.74□□□□□ -0.37
LHX1-202ENST00000616237 SMPXQ9UHP9 88 aa12.74□□□□□ -0.37
LHX1-202ENST00000616237 IGHV7-4-1A0A0J9YVY3 117 aa12.73□□□□□ -0.37
LHX1-202ENST00000616237 OR11H12B2RN74 326 aa12.73□□□□□ -0.37
LHX1-202ENST00000616237 NPY1RP25929 384 aa12.73□□□□□ -0.37
LHX1-202ENST00000616237 DTD1Q8TEA8 209 aa12.73□□□□□ -0.37
LHX1-202ENST00000616237 C7orf50Q9BRJ6 194 aaKnown RBP12.73□□□□□ -0.37
LHX1-202ENST00000616237 HIPK2Q9H2X6 1198 aa12.73□□□□□ -0.37
LHX1-202ENST00000616237 TUBA4BQ9H853 241 aa12.73□□□□□ -0.37
LHX1-202ENST00000616237 CACFD1Q9UGQ2 172 aa12.73□□□□□ -0.37
LHX1-202ENST00000616237 C9orf170A2RU37 121 aa12.72□□□□□ -0.37
LHX1-202ENST00000616237 RBMY1BA6NDE4 496 aaKnown RBP12.72□□□□□ -0.37
LHX1-202ENST00000616237 RBMY1EA6NEQ0 496 aaKnown RBP12.72□□□□□ -0.37
LHX1-202ENST00000616237 CHEK1O14757 476 aa12.72□□□□□ -0.37
LHX1-202ENST00000616237 IGKV1-17P01599 117 aa12.72□□□□□ -0.37
LHX1-202ENST00000616237 HOXB5P09067 269 aa12.72□□□□□ -0.37
LHX1-202ENST00000616237 RBMY1DP0C7P1 496 aaKnown RBP12.72□□□□□ -0.37
LHX1-202ENST00000616237 ANXA7P20073 488 aaKnown RBP12.72□□□□□ -0.37
LHX1-202ENST00000616237 UBE2MP61081 183 aaKnown RBP12.72□□□□□ -0.37
LHX1-202ENST00000616237 HAGHQ16775 308 aa12.72□□□□□ -0.37
LHX1-202ENST00000616237 CNPY1Q3B7I2 92 aa12.72□□□□□ -0.37
LHX1-202ENST00000616237 PRSS54Q6PEW0 395 aa12.72□□□□□ -0.37
LHX1-202ENST00000616237 ZNF600Q6ZNG1 722 aa12.72□□□□□ -0.37
LHX1-202ENST00000616237 RBPMS2Q6ZRY4 209 aaKnown RBP12.72□□□□□ -0.37
LHX1-202ENST00000616237 OR52B4Q8NGK2 314 aa12.72□□□□□ -0.37
LHX1-202ENST00000616237 OR1S1Q8NH92 325 aa12.72□□□□□ -0.37
LHX1-202ENST00000616237 RNASEH2CQ8TDP1 164 aaKnown RBP12.72□□□□□ -0.37
LHX1-202ENST00000616237 WWC2-AS2Q96NR7 200 aa12.72□□□□□ -0.37
LHX1-202ENST00000616237 RCHY1Q96PM5 261 aa12.72□□□□□ -0.37
LHX1-202ENST00000616237 RNF2Q99496 336 aa12.72□□□□□ -0.37
LHX1-202ENST00000616237 RHPN1-AS1Q9BWJ2 59 aa12.72□□□□□ -0.37
LHX1-202ENST00000616237 PUS1Q9Y606 427 aaKnown RBP eCLIP12.72□□□□□ -0.37
LHX1-202ENST00000616237 NBEAL2Q6ZNJ1 2754 aa12.72□□□□□ -0.37
LHX1-202ENST00000616237 DNAH7Q8WXX0 4024 aa12.72□□□□□ -0.37
LHX1-202ENST00000616237 IGHV3OR16-13A0A075B7E8 117 aa12.71□□□□□ -0.37
LHX1-202ENST00000616237 TRAV14DV4A0A0A6YYC5 116 aa12.71□□□□□ -0.37
LHX1-202ENST00000616237 IGHV3-74A0A0B4J1X5 117 aa12.71□□□□□ -0.37
LHX1-202ENST00000616237 TSPAN4O14817 238 aa12.71□□□□□ -0.37
LHX1-202ENST00000616237 APOHP02749 345 aaPredicted RBP12.71□□□□□ -0.37
LHX1-202ENST00000616237 SLC25A6P12236 298 aa12.71□□□□□ -0.37
LHX1-202ENST00000616237 DHRS2Q13268 280 aa12.71□□□□□ -0.37
LHX1-202ENST00000616237 GGNBP1Q5YKI7 109 aa12.71□□□□□ -0.37
LHX1-202ENST00000616237 TMEM116Q8NCL8 245 aa12.71□□□□□ -0.37
LHX1-202ENST00000616237 SPAG8Q99932 426 aaPredicted RBP12.71□□□□□ -0.37
LHX1-202ENST00000616237 TMED3Q9Y3Q3 217 aa12.71□□□□□ -0.37
LHX1-202ENST00000616237 U3KQ87 197 aa12.71□□□□□ -0.37
LHX1-202ENST00000616237 PIGBOS1A0A0B4J2F0 54 aa12.7□□□□□ -0.38
LHX1-202ENST00000616237 CENPXA8MT69 81 aa12.7□□□□□ -0.38
LHX1-202ENST00000616237 IFNA10P01566 189 aa12.7□□□□□ -0.38
LHX1-202ENST00000616237 OR4E1P0C645 316 aa12.7□□□□□ -0.38
LHX1-202ENST00000616237 IGLC1P0CG04 106 aa12.7□□□□□ -0.38
LHX1-202ENST00000616237 RND2P52198 227 aa12.7□□□□□ -0.38
LHX1-202ENST00000616237 TIGITQ495A1 244 aa12.7□□□□□ -0.38
LHX1-202ENST00000616237 FAM90A2PQ658T7 463 aa12.7□□□□□ -0.38
LHX1-202ENST00000616237 SLC16A13Q7RTY0 426 aa12.7□□□□□ -0.38
LHX1-202ENST00000616237 LILRB2Q8N423 598 aa12.7□□□□□ -0.38
LHX1-202ENST00000616237 SRD5A3Q9H8P0 318 aa12.7□□□□□ -0.38
LHX1-202ENST00000616237 RPS10-NUDT3A0A1W2PQS6 291 aa12.69□□□□□ -0.38
LHX1-202ENST00000616237 MPTX1A8MV57 137 aa12.69□□□□□ -0.38
LHX1-202ENST00000616237 ADAP1O75689 374 aa12.69□□□□□ -0.38
LHX1-202ENST00000616237 LINC00299Q6ZSB3 139 aa12.69□□□□□ -0.38
LHX1-202ENST00000616237 LYG2Q86SG7 212 aa12.69□□□□□ -0.38
LHX1-202ENST00000616237 CITED4Q96RK1 184 aa12.69□□□□□ -0.38
LHX1-202ENST00000616237 LYRM1O43325 122 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms