RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 WRBO00258 174 aa4.26□□□□□ -1.73
CPNE3-208ENST00000614678 TPPPO94811 219 aa4.26□□□□□ -1.73
CPNE3-208ENST00000614678 NDUFB6O95139 128 aa4.26□□□□□ -1.73
CPNE3-208ENST00000614678 SFT2D2O95562 160 aa4.26□□□□□ -1.73
CPNE3-208ENST00000614678 EWSR1Q01844 656 aaKnown RBP eCLIP4.26□□□□□ -1.73
CPNE3-208ENST00000614678 TNFRSF9Q07011 255 aa4.26□□□□□ -1.73
CPNE3-208ENST00000614678 RBMS2Q15434 407 aaKnown RBP4.26□□□□□ -1.73
CPNE3-208ENST00000614678 TMEM128Q5BJH2 165 aa4.26□□□□□ -1.73
CPNE3-208ENST00000614678 TRIQKQ629K1 86 aa4.26□□□□□ -1.73
CPNE3-208ENST00000614678 SLC25A42Q86VD7 318 aa4.26□□□□□ -1.73
CPNE3-208ENST00000614678 GPHB5Q86YW7 130 aa4.26□□□□□ -1.73
CPNE3-208ENST00000614678 SLC7A5P1Q8MH63 180 aa4.26□□□□□ -1.73
CPNE3-208ENST00000614678 CENPSQ8N2Z9 138 aa4.26□□□□□ -1.73
CPNE3-208ENST00000614678 ST8SIA2Q92186 375 aa4.26□□□□□ -1.73
CPNE3-208ENST00000614678 HEYLQ9NQ87 328 aaPredicted RBP4.26□□□□□ -1.73
CPNE3-208ENST00000614678 RYR2Q92736 4967 aa4.25□□□□□ -1.73
CPNE3-208ENST00000614678 TRBV7-1A0A0A6YYK4 115 aa4.25□□□□□ -1.73
CPNE3-208ENST00000614678 NUPL2O15504 423 aaKnown RBP4.25□□□□□ -1.73
CPNE3-208ENST00000614678 PITX3O75364 302 aa4.25□□□□□ -1.73
CPNE3-208ENST00000614678 DFFBO76075 338 aa4.25□□□□□ -1.73
CPNE3-208ENST00000614678 OR4E1P0C645 316 aa4.25□□□□□ -1.73
CPNE3-208ENST00000614678 S100GP29377 79 aa4.25□□□□□ -1.73
CPNE3-208ENST00000614678 SNCAP37840 140 aa4.25□□□□□ -1.73
CPNE3-208ENST00000614678 RND2P52198 227 aa4.25□□□□□ -1.73
CPNE3-208ENST00000614678 POLR2GP62487 172 aaKnown RBP eCLIP4.25□□□□□ -1.73
CPNE3-208ENST00000614678 SURF2Q15527 256 aaPredicted RBP4.25□□□□□ -1.73
CPNE3-208ENST00000614678 C21orf62-AS1Q17RA5 79 aa4.25□□□□□ -1.73
CPNE3-208ENST00000614678 LINC01559Q495D7 138 aa4.25□□□□□ -1.73
CPNE3-208ENST00000614678 C15orf40Q8WUR7 153 aa4.25□□□□□ -1.73
CPNE3-208ENST00000614678 TMEM190Q8WZ59 177 aa4.25□□□□□ -1.73
CPNE3-208ENST00000614678 ACY3Q96HD9 319 aa4.25□□□□□ -1.73
CPNE3-208ENST00000614678 ZFAND3Q9H8U3 227 aa4.25□□□□□ -1.73
CPNE3-208ENST00000614678 NUDT15Q9NV35 164 aa4.25□□□□□ -1.73
CPNE3-208ENST00000614678 LYRM1O43325 122 aa4.25□□□□□ -1.73
CPNE3-208ENST00000614678 REC114Q7Z4M0 266 aa4.25□□□□□ -1.73
CPNE3-208ENST00000614678 DYNLRB2Q8TF09 96 aa4.25□□□□□ -1.73
CPNE3-208ENST00000614678 NPIPB3Q92617 1050 aa4.25□□□□□ -1.73
CPNE3-208ENST00000614678 BORCS5Q969J3 196 aa4.25□□□□□ -1.73
CPNE3-208ENST00000614678 CXorf58Q96LI9 332 aa4.25□□□□□ -1.73
CPNE3-208ENST00000614678 ZNF436Q9C0F3 470 aaPredicted RBP4.25□□□□□ -1.73
CPNE3-208ENST00000614678 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.25□□□□□ -1.73
CPNE3-208ENST00000614678 C15orf62A8K5M9 175 aa4.25□□□□□ -1.73
CPNE3-208ENST00000614678 GNG7O60262 68 aa4.25□□□□□ -1.73
CPNE3-208ENST00000614678 SIX6O95475 246 aa4.25□□□□□ -1.73
CPNE3-208ENST00000614678 USF2Q15853 346 aaPredicted RBP4.25□□□□□ -1.73
CPNE3-208ENST00000614678 ODF3L2Q3SX64 289 aa4.25□□□□□ -1.73
CPNE3-208ENST00000614678 C20orf85Q9H1P6 137 aa4.25□□□□□ -1.73
CPNE3-208ENST00000614678 IGKV1D-37A0A075B6S9 117 aa4.24□□□□□ -1.73
CPNE3-208ENST00000614678 A0A0B4J2A0 478 aa4.24□□□□□ -1.73
CPNE3-208ENST00000614678 DHFRP00374 187 aa4.24□□□□□ -1.73
CPNE3-208ENST00000614678 FGF2P09038 288 aa4.24□□□□□ -1.73
CPNE3-208ENST00000614678 SULT1A3P0DMM9 295 aa4.24□□□□□ -1.73
CPNE3-208ENST00000614678 SULT1A4P0DMN0 295 aa4.24□□□□□ -1.73
CPNE3-208ENST00000614678 ERHP84090 104 aaKnown RBP4.24□□□□□ -1.73
CPNE3-208ENST00000614678 HAGHQ16775 308 aa4.24□□□□□ -1.73
CPNE3-208ENST00000614678 AARDQ4LEZ3 155 aa4.24□□□□□ -1.73
CPNE3-208ENST00000614678 LEMD1Q68G75 181 aa4.24□□□□□ -1.73
CPNE3-208ENST00000614678 THOC7Q6I9Y2 204 aaKnown RBP4.24□□□□□ -1.73
CPNE3-208ENST00000614678 ZNF114Q8NC26 417 aa4.24□□□□□ -1.73
CPNE3-208ENST00000614678 SLC24A4Q8NFF2 622 aa4.24□□□□□ -1.73
CPNE3-208ENST00000614678 OR1S1Q8NH92 325 aa4.24□□□□□ -1.73
CPNE3-208ENST00000614678 DTD1Q8TEA8 209 aa4.24□□□□□ -1.73
CPNE3-208ENST00000614678 AIFM2Q9BRQ8 373 aa4.24□□□□□ -1.73
CPNE3-208ENST00000614678 RHPN1-AS1Q9BWJ2 59 aa4.24□□□□□ -1.73
CPNE3-208ENST00000614678 PTTG2Q9NZH5 202 aa4.24□□□□□ -1.73
CPNE3-208ENST00000614678 HSPB7Q9UBY9 170 aa4.24□□□□□ -1.73
CPNE3-208ENST00000614678 SHPKQ9UHJ6 478 aa4.24□□□□□ -1.73
CPNE3-208ENST00000614678 A8MWP6 167 aa4.24□□□□□ -1.73
CPNE3-208ENST00000614678 OR11H12B2RN74 326 aa4.24□□□□□ -1.73
CPNE3-208ENST00000614678 CHEK1O14757 476 aa4.24□□□□□ -1.73
CPNE3-208ENST00000614678 SCGB1D2O95969 90 aa4.24□□□□□ -1.73
CPNE3-208ENST00000614678 IFNA10P01566 189 aa4.24□□□□□ -1.73
CPNE3-208ENST00000614678 TCRBP04435 133 aa4.24□□□□□ -1.73
CPNE3-208ENST00000614678 INSL3P51460 131 aa4.24□□□□□ -1.73
CPNE3-208ENST00000614678 SPCS3P61009 180 aa4.24□□□□□ -1.73
CPNE3-208ENST00000614678 ARL16Q0P5N6 197 aa4.24□□□□□ -1.73
CPNE3-208ENST00000614678 OR2F1Q13607 317 aa4.24□□□□□ -1.73
CPNE3-208ENST00000614678 SMCO1Q147U7 214 aa4.24□□□□□ -1.73
CPNE3-208ENST00000614678 C4orf46Q504U0 113 aa4.24□□□□□ -1.73
CPNE3-208ENST00000614678 VN1R17PQ8TDU5 208 aa4.24□□□□□ -1.73
CPNE3-208ENST00000614678 BSCL2Q96G97 398 aaPredicted RBP4.24□□□□□ -1.73
CPNE3-208ENST00000614678 FAM212BQ9NTI7 297 aaPredicted RBP4.24□□□□□ -1.73
CPNE3-208ENST00000614678 FKBP11Q9NYL4 201 aa4.24□□□□□ -1.73
CPNE3-208ENST00000614678 KCNIP3Q9Y2W7 256 aa4.24□□□□□ -1.73
CPNE3-208ENST00000614678 EPPK1P58107 5090 aaKnown RBP4.24□□□□□ -1.73
CPNE3-208ENST00000614678 LGALS9O00182 355 aa4.24□□□□□ -1.73
CPNE3-208ENST00000614678 IGLC1P0CG04 106 aa4.24□□□□□ -1.73
CPNE3-208ENST00000614678 INPP1P49441 399 aa4.24□□□□□ -1.73
CPNE3-208ENST00000614678 PAX9P55771 341 aa4.24□□□□□ -1.73
CPNE3-208ENST00000614678 PVRIGQ6DKI7 326 aa4.24□□□□□ -1.73
CPNE3-208ENST00000614678 NRARPQ7Z6K4 114 aa4.24□□□□□ -1.73
CPNE3-208ENST00000614678 LGI3Q8N145 548 aa4.24□□□□□ -1.73
CPNE3-208ENST00000614678 PDCD10Q9BUL8 212 aa4.24□□□□□ -1.73
CPNE3-208ENST00000614678 GSKIPQ9P0R6 139 aa4.24□□□□□ -1.73
CPNE3-208ENST00000614678 RABL2BQ9UNT1 228 aa4.24□□□□□ -1.73
CPNE3-208ENST00000614678 HIST1H1BP16401 226 aaKnown RBP4.23□□□□□ -1.73
CPNE3-208ENST00000614678 MFAP4P55083 255 aa4.23□□□□□ -1.73
CPNE3-208ENST00000614678 GAMTQ14353 236 aa4.23□□□□□ -1.73
CPNE3-208ENST00000614678 FAM106AQ4KMX7 169 aa4.23□□□□□ -1.73
CPNE3-208ENST00000614678 DAZ1Q9NQZ3 744 aaKnown RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms