RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 TBL2Q9Y4P3 447 aaKnown RBP8.15□□□□□ -1.1
GGA3-221ENST00000614198 SAA2-SAA4A0A096LPE2 208 aa8.15□□□□□ -1.11
GGA3-221ENST00000614198 TRAV38-1A0A0B4J264 116 aa8.15□□□□□ -1.11
GGA3-221ENST00000614198 A1L4Q6 167 aa8.15□□□□□ -1.11
GGA3-221ENST00000614198 SLC17A3O00476 420 aa8.15□□□□□ -1.11
GGA3-221ENST00000614198 ATP5G3P48201 142 aa8.15□□□□□ -1.11
GGA3-221ENST00000614198 GNB1P62873 340 aa8.15□□□□□ -1.11
GGA3-221ENST00000614198 PRR27Q6MZM9 219 aa8.15□□□□□ -1.11
GGA3-221ENST00000614198 NRGNQ92686 78 aa8.15□□□□□ -1.11
GGA3-221ENST00000614198 TIMM8BQ9Y5J9 83 aaPredicted RBP8.15□□□□□ -1.11
GGA3-221ENST00000614198 DSCAML1Q8TD84 2053 aa8.14□□□□□ -1.11
GGA3-221ENST00000614198 IGLC7A0M8Q6 106 aa8.14□□□□□ -1.11
GGA3-221ENST00000614198 C22orf46C9J442 243 aa8.14□□□□□ -1.11
GGA3-221ENST00000614198 C12orf77C9JDV5 145 aa8.14□□□□□ -1.11
GGA3-221ENST00000614198 RBFOX2O43251 390 aaKnown RBP eCLIP8.14□□□□□ -1.11
GGA3-221ENST00000614198 GNG7O60262 68 aa8.14□□□□□ -1.11
GGA3-221ENST00000614198 REG1AP05451 166 aa8.14□□□□□ -1.11
GGA3-221ENST00000614198 PRRX1P54821 245 aa8.14□□□□□ -1.11
GGA3-221ENST00000614198 TCL1AP56279 114 aa8.14□□□□□ -1.11
GGA3-221ENST00000614198 SRSF7Q16629 238 aaKnown RBP eCLIP8.14□□□□□ -1.11
GGA3-221ENST00000614198 LHFPL4Q7Z7J7 247 aa8.14□□□□□ -1.11
GGA3-221ENST00000614198 ZNF843Q8N446 348 aa8.14□□□□□ -1.11
GGA3-221ENST00000614198 OR10P1Q8NGE3 313 aa8.14□□□□□ -1.11
GGA3-221ENST00000614198 UHRF2Q96PU4 802 aa8.14□□□□□ -1.11
GGA3-221ENST00000614198 SERTAD4Q9NUC0 356 aa8.14□□□□□ -1.11
GGA3-221ENST00000614198 ODAMA1E959 279 aa8.14□□□□□ -1.11
GGA3-221ENST00000614198 SNURFLB1AK76 121 aa8.14□□□□□ -1.11
GGA3-221ENST00000614198 SMIM21Q3B7S5 101 aa8.14□□□□□ -1.11
GGA3-221ENST00000614198 C3orf36Q3SXR2 165 aa8.14□□□□□ -1.11
GGA3-221ENST00000614198 ZNF114Q8NC26 417 aa8.14□□□□□ -1.11
GGA3-221ENST00000614198 DOPEY2Q9Y3R5 2298 aa8.14□□□□□ -1.11
GGA3-221ENST00000614198 CLDN14O95500 239 aa8.13□□□□□ -1.11
GGA3-221ENST00000614198 FBXL19-AS1Q494R0 122 aa8.13□□□□□ -1.11
GGA3-221ENST00000614198 GCSAMLQ5JQS6 135 aa8.13□□□□□ -1.11
GGA3-221ENST00000614198 OR4A47Q6IF82 309 aa8.13□□□□□ -1.11
GGA3-221ENST00000614198 WFDC12Q8WWY7 111 aa8.13□□□□□ -1.11
GGA3-221ENST00000614198 TNFRSF14Q92956 283 aa8.13□□□□□ -1.11
GGA3-221ENST00000614198 LSM10Q969L4 123 aaKnown RBP8.13□□□□□ -1.11
GGA3-221ENST00000614198 NAT8BQ9UHF3 227 aa8.13□□□□□ -1.11
GGA3-221ENST00000614198 ITPR2Q14571 2701 aa8.13□□□□□ -1.11
GGA3-221ENST00000614198 NDUFS8O00217 210 aa8.13□□□□□ -1.11
GGA3-221ENST00000614198 COL8A1P27658 744 aa8.13□□□□□ -1.11
GGA3-221ENST00000614198 APOBEC3AP31941 199 aaPredicted RBP8.13□□□□□ -1.11
GGA3-221ENST00000614198 ZNF672Q499Z4 452 aaPredicted RBP8.13□□□□□ -1.11
GGA3-221ENST00000614198 OR10G8Q8NGN5 311 aa8.13□□□□□ -1.11
GGA3-221ENST00000614198 IGFBPL1Q8WX77 278 aa8.13□□□□□ -1.11
GGA3-221ENST00000614198 GNB4Q9HAV0 340 aa8.13□□□□□ -1.11
GGA3-221ENST00000614198 RNF7Q9UBF6 113 aa8.13□□□□□ -1.11
GGA3-221ENST00000614198 SRSF1Q07955 248 aaKnown RBP eCLIP8.13□□□□□ -1.11
GGA3-221ENST00000614198 HLA-DRB5Q30154 266 aa8.13□□□□□ -1.11
GGA3-221ENST00000614198 Q8IYB0 196 aa8.13□□□□□ -1.11
GGA3-221ENST00000614198 SMIM12Q96EX1 92 aa8.13□□□□□ -1.11
GGA3-221ENST00000614198 ABCA1O95477 2261 aa8.12□□□□□ -1.11
GGA3-221ENST00000614198 TRBV9A0A0B4J1U6 114 aa8.12□□□□□ -1.11
GGA3-221ENST00000614198 SAP30O75446 220 aa8.12□□□□□ -1.11
GGA3-221ENST00000614198 IGLV2-14P01704 120 aa8.12□□□□□ -1.11
GGA3-221ENST00000614198 G6PCP35575 357 aa8.12□□□□□ -1.11
GGA3-221ENST00000614198 UBTD1Q9HAC8 227 aa8.12□□□□□ -1.11
GGA3-221ENST00000614198 KCNIP2Q9NS61 270 aa8.12□□□□□ -1.11
GGA3-221ENST00000614198 IL36BQ9NZH7 164 aa8.12□□□□□ -1.11
GGA3-221ENST00000614198 OR2W1Q9Y3N9 320 aa8.12□□□□□ -1.11
GGA3-221ENST00000614198 ANKRD17O75179 2603 aaKnown RBP8.12□□□□□ -1.11
GGA3-221ENST00000614198 FAM90A10PA6NDY2 464 aa8.12□□□□□ -1.11
GGA3-221ENST00000614198 FAM90A18PA6NE21 464 aa8.12□□□□□ -1.11
GGA3-221ENST00000614198 FAM90A16PA6NEW6 464 aa8.12□□□□□ -1.11
GGA3-221ENST00000614198 FAM90A20PA6NIJ5 464 aa8.12□□□□□ -1.11
GGA3-221ENST00000614198 FAM90A8PA6NJQ4 464 aa8.12□□□□□ -1.11
GGA3-221ENST00000614198 FAM90A7PA6NKC0 464 aa8.12□□□□□ -1.11
GGA3-221ENST00000614198 FAM90A22PA8MWA6 464 aa8.12□□□□□ -1.11
GGA3-221ENST00000614198 FAM90A12PA8MX19 464 aa8.12□□□□□ -1.11
GGA3-221ENST00000614198 FAM90A5PA8MXJ8 464 aa8.12□□□□□ -1.11
GGA3-221ENST00000614198 FAM90A23PA8MXZ1 464 aa8.12□□□□□ -1.11
GGA3-221ENST00000614198 HBZP02008 142 aa8.12□□□□□ -1.11
GGA3-221ENST00000614198 FAM90A15PP0C7V4 464 aa8.12□□□□□ -1.11
GGA3-221ENST00000614198 FAM90A13PP0C7W8 464 aa8.12□□□□□ -1.11
GGA3-221ENST00000614198 FAM90A14PP0C7W9 464 aa8.12□□□□□ -1.11
GGA3-221ENST00000614198 FAM90A24PP0C7X0 464 aa8.12□□□□□ -1.11
GGA3-221ENST00000614198 C3orf79P0CE67 100 aa8.12□□□□□ -1.11
GGA3-221ENST00000614198 PDLIM3Q53GG5 364 aaPredicted RBP8.12□□□□□ -1.11
GGA3-221ENST00000614198 LRRC10Q5BKY1 277 aa8.12□□□□□ -1.11
GGA3-221ENST00000614198 OR10J3Q5JRS4 329 aa8.12□□□□□ -1.11
GGA3-221ENST00000614198 OR4F17Q8NGA8 305 aa8.12□□□□□ -1.11
GGA3-221ENST00000614198 C5orf30Q96GV9 206 aa8.12□□□□□ -1.11
GGA3-221ENST00000614198 KCNS1Q96KK3 526 aa8.12□□□□□ -1.11
GGA3-221ENST00000614198 NGBQ9NPG2 151 aa8.12□□□□□ -1.11
GGA3-221ENST00000614198 A0A1W2PS18 150 aa8.12□□□□□ -1.11
GGA3-221ENST00000614198 CTXN2P0C2S0 81 aa8.12□□□□□ -1.11
GGA3-221ENST00000614198 TMEM14EPQ6UXP3 125 aa8.12□□□□□ -1.11
GGA3-221ENST00000614198 C1orf229Q6ZS94 237 aaPredicted RBP8.12□□□□□ -1.11
GGA3-221ENST00000614198 FAM19A2Q8N3H0 131 aa8.12□□□□□ -1.11
GGA3-221ENST00000614198 BORCS7Q96B45 105 aa8.12□□□□□ -1.11
GGA3-221ENST00000614198 GAFA1Q96PS6 74 aa8.12□□□□□ -1.11
GGA3-221ENST00000614198 TANC2Q9HCD6 1990 aa8.11□□□□□ -1.11
GGA3-221ENST00000614198 K7ERU9 68 aa8.11□□□□□ -1.11
GGA3-221ENST00000614198 NBEAP1P0C6P0 100 aa8.11□□□□□ -1.11
GGA3-221ENST00000614198 ZNF134P52741 427 aa8.11□□□□□ -1.11
GGA3-221ENST00000614198 LGALS4P56470 323 aa8.11□□□□□ -1.11
GGA3-221ENST00000614198 PMCHL1Q16048 86 aa8.11□□□□□ -1.11
GGA3-221ENST00000614198 CFAP161Q6P656 301 aa8.11□□□□□ -1.11
GGA3-221ENST00000614198 GNB1LQ9BYB4 327 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms