RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 C15orf53Q8NAA6 179 aa9.2□□□□□ -0.94
CNTNAP3B-211ENST00000612828 MBD3L2Q8NHZ7 208 aaPredicted RBP9.2□□□□□ -0.94
CNTNAP3B-211ENST00000612828 TM2D2Q9BX73 214 aa9.2□□□□□ -0.94
CNTNAP3B-211ENST00000612828 PDCD11Q14690 1871 aaKnown RBP9.2□□□□□ -0.94
CNTNAP3B-211ENST00000612828 SORL1Q92673 2214 aa9.2□□□□□ -0.94
CNTNAP3B-211ENST00000612828 ADAMTS7Q9UKP4 1686 aa9.2□□□□□ -0.94
CNTNAP3B-211ENST00000612828 PRR19A6NJB7 356 aa9.2□□□□□ -0.94
CNTNAP3B-211ENST00000612828 FOXG1P55316 489 aaPredicted RBP9.2□□□□□ -0.94
CNTNAP3B-211ENST00000612828 PSMG4Q5JS54 123 aa9.2□□□□□ -0.94
CNTNAP3B-211ENST00000612828 MCM3APO60318 1980 aa9.2□□□□□ -0.94
CNTNAP3B-211ENST00000612828 SCN4AP35499 1836 aa9.2□□□□□ -0.94
CNTNAP3B-211ENST00000612828 CBLN4Q9NTU7 201 aa9.2□□□□□ -0.94
CNTNAP3B-211ENST00000612828 LINC01553A4QN01 128 aa9.19□□□□□ -0.94
CNTNAP3B-211ENST00000612828 UMODP07911 640 aa9.19□□□□□ -0.94
CNTNAP3B-211ENST00000612828 TMEM91Q6ZNR0 172 aa9.19□□□□□ -0.94
CNTNAP3B-211ENST00000612828 FAM57AQ8TBR7 257 aa9.19□□□□□ -0.94
CNTNAP3B-211ENST00000612828 U3KQE9 123 aa9.19□□□□□ -0.94
CNTNAP3B-211ENST00000612828 IGHV3-16A0A0C4DH30 117 aa9.19□□□□□ -0.94
CNTNAP3B-211ENST00000612828 AWAT1Q58HT5 328 aa9.19□□□□□ -0.94
CNTNAP3B-211ENST00000612828 GATAD1Q8WUU5 269 aa9.19□□□□□ -0.94
CNTNAP3B-211ENST00000612828 LINC00477Q96M19 166 aa9.19□□□□□ -0.94
CNTNAP3B-211ENST00000612828 CRLF1O75462 422 aa9.19□□□□□ -0.94
CNTNAP3B-211ENST00000612828 CFHR2P36980 270 aa9.19□□□□□ -0.94
CNTNAP3B-211ENST00000612828 CALYQ9NYX4 217 aa9.19□□□□□ -0.94
CNTNAP3B-211ENST00000612828 CA11O75493 328 aa9.19□□□□□ -0.94
CNTNAP3B-211ENST00000612828 GABRG2P18507 467 aa9.19□□□□□ -0.94
CNTNAP3B-211ENST00000612828 FANCD2OSQ96PS1 177 aa9.19□□□□□ -0.94
CNTNAP3B-211ENST00000612828 ACER2Q5QJU3 275 aa9.19□□□□□ -0.94
CNTNAP3B-211ENST00000612828 IGF2-ASQ6U949 168 aa9.19□□□□□ -0.94
CNTNAP3B-211ENST00000612828 CTAG2O75638 210 aa9.18□□□□□ -0.94
CNTNAP3B-211ENST00000612828 PSG4Q00888 419 aa9.18□□□□□ -0.94
CNTNAP3B-211ENST00000612828 PRSS42Q7Z5A4 293 aa9.18□□□□□ -0.94
CNTNAP3B-211ENST00000612828 OR10W1Q8NGF6 305 aa9.18□□□□□ -0.94
CNTNAP3B-211ENST00000612828 ZNF729A6NN14 1252 aaPredicted RBP9.18□□□□□ -0.94
CNTNAP3B-211ENST00000612828 NPIPB8E9PQR5 432 aa9.18□□□□□ -0.94
CNTNAP3B-211ENST00000612828 NPIPB9F8W1W9 429 aa9.18□□□□□ -0.94
CNTNAP3B-211ENST00000612828 NDUFB1O75438 58 aa9.18□□□□□ -0.94
CNTNAP3B-211ENST00000612828 IFITM2Q01629 132 aa9.18□□□□□ -0.94
CNTNAP3B-211ENST00000612828 KLHL30-AS1Q8NEE0 82 aa9.18□□□□□ -0.94
CNTNAP3B-211ENST00000612828 NAA38Q9BRA0 125 aaKnown RBP9.18□□□□□ -0.94
CNTNAP3B-211ENST00000612828 PRDM6Q9NQX0 595 aa9.18□□□□□ -0.94
CNTNAP3B-211ENST00000612828 TBX21Q9UL17 535 aa9.18□□□□□ -0.94
CNTNAP3B-211ENST00000612828 WFDC6Q9BQY6 131 aa9.18□□□□□ -0.94
CNTNAP3B-211ENST00000612828 MRPS18BQ9Y676 258 aaKnown RBP9.18□□□□□ -0.94
CNTNAP3B-211ENST00000612828 IRF3Q14653 427 aa9.18□□□□□ -0.94
CNTNAP3B-211ENST00000612828 ZNF362Q5T0B9 420 aaPredicted RBP9.18□□□□□ -0.94
CNTNAP3B-211ENST00000612828 MORN4Q8NDC4 146 aa9.18□□□□□ -0.94
CNTNAP3B-211ENST00000612828 PHF7Q9BWX1 381 aaPredicted RBP9.18□□□□□ -0.94
CNTNAP3B-211ENST00000612828 RNF222A6NCQ9 220 aa9.18□□□□□ -0.94
CNTNAP3B-211ENST00000612828 SLC25A38Q96DW6 304 aa9.18□□□□□ -0.94
CNTNAP3B-211ENST00000612828 ZNF488Q96MN9 340 aa9.18□□□□□ -0.94
CNTNAP3B-211ENST00000612828 VSIRQ9H7M9 311 aa9.18□□□□□ -0.94
CNTNAP3B-211ENST00000612828 IGHV4-30-2A0A087WSY4 118 aa9.17□□□□□ -0.94
CNTNAP3B-211ENST00000612828 NDUFC2O95298 119 aa9.17□□□□□ -0.94
CNTNAP3B-211ENST00000612828 PMVKQ15126 192 aa9.17□□□□□ -0.94
CNTNAP3B-211ENST00000612828 SEM1Q6ZVN7 128 aa9.17□□□□□ -0.94
CNTNAP3B-211ENST00000612828 MARVELD1Q9BSK0 173 aa9.17□□□□□ -0.94
CNTNAP3B-211ENST00000612828 PTPRQQ9UMZ3 2332 aa9.17□□□□□ -0.94
CNTNAP3B-211ENST00000612828 IGHV5-51A0A0C4DH38 117 aa9.17□□□□□ -0.94
CNTNAP3B-211ENST00000612828 A8MXK9 166 aa9.17□□□□□ -0.94
CNTNAP3B-211ENST00000612828 ZNF124Q15973 351 aa9.17□□□□□ -0.94
CNTNAP3B-211ENST00000612828 FAM231DQ6ZW35 169 aa9.17□□□□□ -0.94
CNTNAP3B-211ENST00000612828 A0A0G2JLM5 398 aa9.17□□□□□ -0.94
CNTNAP3B-211ENST00000612828 GAGE12HA6NDE8 117 aa9.17□□□□□ -0.94
CNTNAP3B-211ENST00000612828 CYB561D1Q8N8Q1 229 aa9.17□□□□□ -0.94
CNTNAP3B-211ENST00000612828 EML6Q6ZMW3 1958 aa9.17□□□□□ -0.94
CNTNAP3B-211ENST00000612828 IGHV4-38-2P0DP08 117 aa9.17□□□□□ -0.94
CNTNAP3B-211ENST00000612828 IGHG2P01859 326 aa9.17□□□□□ -0.94
CNTNAP3B-211ENST00000612828 FCRL6Q6DN72 434 aa9.17□□□□□ -0.94
CNTNAP3B-211ENST00000612828 SIGLEC15Q6ZMC9 328 aa9.17□□□□□ -0.94
CNTNAP3B-211ENST00000612828 LINC00615Q96LM1 132 aaPredicted RBP9.17□□□□□ -0.94
CNTNAP3B-211ENST00000612828 OR51M1Q9H341 326 aa9.17□□□□□ -0.94
CNTNAP3B-211ENST00000612828 CAPZBP47756 277 aa9.17□□□□□ -0.94
CNTNAP3B-211ENST00000612828 NRN1Q9NPD7 142 aa9.17□□□□□ -0.94
CNTNAP3B-211ENST00000612828 CCL28Q9NRJ3 127 aa9.17□□□□□ -0.94
CNTNAP3B-211ENST00000612828 A0A0U1RQV1 116 aa9.16□□□□□ -0.94
CNTNAP3B-211ENST00000612828 C9orf170A2RU37 121 aa9.16□□□□□ -0.94
CNTNAP3B-211ENST00000612828 SYS1-DBNDD2H3BUS1 97 aa9.16□□□□□ -0.94
CNTNAP3B-211ENST00000612828 GPX4P36969 197 aaPredicted RBP9.16□□□□□ -0.94
CNTNAP3B-211ENST00000612828 UBL5Q9BZL1 73 aa9.16□□□□□ -0.94
CNTNAP3B-211ENST00000612828 FBXL7Q9UJT9 491 aa9.16□□□□□ -0.94
CNTNAP3B-211ENST00000612828 RPL8P62917 257 aaKnown RBP9.16□□□□□ -0.94
CNTNAP3B-211ENST00000612828 C9orf47Q6ZRZ4 202 aa9.16□□□□□ -0.94
CNTNAP3B-211ENST00000612828 OR51G1Q8NGK1 321 aa9.16□□□□□ -0.94
CNTNAP3B-211ENST00000612828 PLPPR1Q8TBJ4 325 aa9.16□□□□□ -0.94
CNTNAP3B-211ENST00000612828 TMEM170AQ8WVE7 144 aa9.16□□□□□ -0.94
CNTNAP3B-211ENST00000612828 ABHD17AQ96GS6 310 aa9.16□□□□□ -0.94
CNTNAP3B-211ENST00000612828 SHANK1Q9Y566 2161 aa9.16□□□□□ -0.94
CNTNAP3B-211ENST00000612828 PRSS22Q9GZN4 317 aa9.16□□□□□ -0.94
CNTNAP3B-211ENST00000612828 TMEM196Q5HYL7 178 aa9.16□□□□□ -0.94
CNTNAP3B-211ENST00000612828 TMEM45BQ96B21 275 aa9.16□□□□□ -0.94
CNTNAP3B-211ENST00000612828 SPXQ9BT56 116 aa9.16□□□□□ -0.94
CNTNAP3B-211ENST00000612828 LAMB1P07942 1786 aa9.16□□□□□ -0.94
CNTNAP3B-211ENST00000612828 C3orf22Q8N5N4 141 aa9.16□□□□□ -0.94
CNTNAP3B-211ENST00000612828 CFHR4Q92496 578 aa9.16□□□□□ -0.94
CNTNAP3B-211ENST00000612828 FOXD3Q9UJU5 478 aaPredicted RBP9.16□□□□□ -0.94
CNTNAP3B-211ENST00000612828 THADAQ6YHU6 1953 aa9.15□□□□□ -0.94
CNTNAP3B-211ENST00000612828 CSRP3P50461 194 aa9.15□□□□□ -0.94
CNTNAP3B-211ENST00000612828 EIF4EBP2Q13542 120 aaPredicted RBP9.15□□□□□ -0.94
CNTNAP3B-211ENST00000612828 VN1R4Q7Z5H5 301 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms