RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 OR52I2Q8NH67 350 aa13.01□□□□□ -0.33
SSBP1-215ENST00000612337 C11orf45Q8TAV5 145 aa13.01□□□□□ -0.33
SSBP1-215ENST00000612337 ABHD1Q96SE0 405 aa13.01□□□□□ -0.33
SSBP1-215ENST00000612337 PDCD10Q9BUL8 212 aa13.01□□□□□ -0.33
SSBP1-215ENST00000612337 HERC2O95714 4834 aa13□□□□□ -0.33
SSBP1-215ENST00000612337 IGHV3-66A0A0C4DH42 116 aa13□□□□□ -0.33
SSBP1-215ENST00000612337 A0A1B0GU03 582 aa13□□□□□ -0.33
SSBP1-215ENST00000612337 RNASE2P10153 161 aaKnown RBP13□□□□□ -0.33
SSBP1-215ENST00000612337 DEFB131AP59861 70 aa13□□□□□ -0.33
SSBP1-215ENST00000612337 NANOS2P60321 138 aaKnown RBP13□□□□□ -0.33
SSBP1-215ENST00000612337 RPL11P62913 178 aaKnown RBP13□□□□□ -0.33
SSBP1-215ENST00000612337 SPCS2Q15005 226 aa13□□□□□ -0.33
SSBP1-215ENST00000612337 C15orf40Q8WUR7 153 aa13□□□□□ -0.33
SSBP1-215ENST00000612337 MIXL1Q9H2W2 232 aa13□□□□□ -0.33
SSBP1-215ENST00000612337 COPZ2Q9P299 210 aa13□□□□□ -0.33
SSBP1-215ENST00000612337 MTFP1Q9UDX5 166 aa13□□□□□ -0.33
SSBP1-215ENST00000612337 A0A1W2PS18 150 aa12.99□□□□□ -0.33
SSBP1-215ENST00000612337 CLN5O75503 358 aa12.99□□□□□ -0.33
SSBP1-215ENST00000612337 NPPCP23582 126 aa12.99□□□□□ -0.33
SSBP1-215ENST00000612337 ETV6P41212 452 aa12.99□□□□□ -0.33
SSBP1-215ENST00000612337 HOXA1P49639 335 aaPredicted RBP12.99□□□□□ -0.33
SSBP1-215ENST00000612337 TMEM187Q14656 261 aa12.99□□□□□ -0.33
SSBP1-215ENST00000612337 RBMS2Q15434 407 aaKnown RBP12.99□□□□□ -0.33
SSBP1-215ENST00000612337 LEMD1Q68G75 181 aa12.99□□□□□ -0.33
SSBP1-215ENST00000612337 CLVS1Q8IUQ0 354 aaPredicted RBP12.99□□□□□ -0.33
SSBP1-215ENST00000612337 FAM24BQ8N5W8 94 aa12.99□□□□□ -0.33
SSBP1-215ENST00000612337 CCDC71LQ8N9Z2 235 aa12.99□□□□□ -0.33
SSBP1-215ENST00000612337 ZFAND1Q8TCF1 268 aa12.99□□□□□ -0.33
SSBP1-215ENST00000612337 FNDC4Q9H6D8 234 aaPredicted RBP12.99□□□□□ -0.33
SSBP1-215ENST00000612337 ENY2Q9NPA8 101 aa12.99□□□□□ -0.33
SSBP1-215ENST00000612337 CTDSP2O14595 271 aa12.98□□□□□ -0.33
SSBP1-215ENST00000612337 B3GALNT1O75752 331 aa12.98□□□□□ -0.33
SSBP1-215ENST00000612337 IFNA4P05014 189 aa12.98□□□□□ -0.33
SSBP1-215ENST00000612337 UCP1P25874 307 aa12.98□□□□□ -0.33
SSBP1-215ENST00000612337 OPRK1P41145 380 aa12.98□□□□□ -0.33
SSBP1-215ENST00000612337 RPL5P46777 297 aaKnown RBP12.98□□□□□ -0.33
SSBP1-215ENST00000612337 PPP5CP53041 499 aa12.98□□□□□ -0.33
SSBP1-215ENST00000612337 TRIM16LQ309B1 348 aa12.98□□□□□ -0.33
SSBP1-215ENST00000612337 SP6Q3SY56 376 aa12.98□□□□□ -0.33
SSBP1-215ENST00000612337 OR4D10Q8NGI6 311 aa12.98□□□□□ -0.33
SSBP1-215ENST00000612337 OR4X1Q8NH49 305 aa12.98□□□□□ -0.33
SSBP1-215ENST00000612337 TERB2Q8NHR7 220 aa12.98□□□□□ -0.33
SSBP1-215ENST00000612337 RAB2BQ8WUD1 216 aa12.98□□□□□ -0.33
SSBP1-215ENST00000612337 RRNAD1Q96FB5 475 aaKnown RBP12.98□□□□□ -0.33
SSBP1-215ENST00000612337 METTL26Q96S19 204 aa12.98□□□□□ -0.33
SSBP1-215ENST00000612337 MRPL36Q9P0J6 103 aaKnown RBP12.98□□□□□ -0.33
SSBP1-215ENST00000612337 FBXL17Q9UF56 701 aa12.98□□□□□ -0.33
SSBP1-215ENST00000612337 RABAC1Q9UI14 185 aa12.98□□□□□ -0.33
SSBP1-215ENST00000612337 A0A0G2JRQ6 117 aa12.97□□□□□ -0.33
SSBP1-215ENST00000612337 RGS5O15539 181 aa12.97□□□□□ -0.33
SSBP1-215ENST00000612337 SCGB2A1O75556 95 aa12.97□□□□□ -0.33
SSBP1-215ENST00000612337 DEDDO75618 318 aa12.97□□□□□ -0.33
SSBP1-215ENST00000612337 CD74P04233 296 aa12.97□□□□□ -0.33
SSBP1-215ENST00000612337 CRYBB3P26998 211 aa12.97□□□□□ -0.33
SSBP1-215ENST00000612337 TMBIM6P55061 237 aa12.97□□□□□ -0.33
SSBP1-215ENST00000612337 BSXQ3C1V8 233 aa12.97□□□□□ -0.33
SSBP1-215ENST00000612337 STHQ8IWL8 128 aa12.97□□□□□ -0.33
SSBP1-215ENST00000612337 TMEM229BQ8NBD8 167 aa12.97□□□□□ -0.33
SSBP1-215ENST00000612337 OR13C8Q8NGS7 320 aa12.97□□□□□ -0.33
SSBP1-215ENST00000612337 BCL7BQ9BQE9 202 aa12.97□□□□□ -0.33
SSBP1-215ENST00000612337 AGRNO00468 2067 aa12.97□□□□□ -0.33
SSBP1-215ENST00000612337 DEFB4AO15263 64 aa12.96□□□□□ -0.33
SSBP1-215ENST00000612337 MLANAQ16655 118 aa12.96□□□□□ -0.33
SSBP1-215ENST00000612337 SCGB2B2Q4G0G5 96 aa12.96□□□□□ -0.33
SSBP1-215ENST00000612337 AARDQ4LEZ3 155 aa12.96□□□□□ -0.33
SSBP1-215ENST00000612337 RNASE11Q8TAA1 199 aaKnown RBP12.96□□□□□ -0.33
SSBP1-215ENST00000612337 DYNC2LI1Q8TCX1 351 aa12.96□□□□□ -0.33
SSBP1-215ENST00000612337 GRAMD2BQ96HH9 432 aa12.96□□□□□ -0.33
SSBP1-215ENST00000612337 GABARAPH6UMI1 98 aa12.95□□□□□ -0.34
SSBP1-215ENST00000612337 K7EQG2 157 aa12.95□□□□□ -0.34
SSBP1-215ENST00000612337 IGKV1-17P01599 117 aa12.95□□□□□ -0.34
SSBP1-215ENST00000612337 P2RY1P47900 373 aa12.95□□□□□ -0.34
SSBP1-215ENST00000612337 TAS2R19P59542 299 aa12.95□□□□□ -0.34
SSBP1-215ENST00000612337 SPCS3P61009 180 aa12.95□□□□□ -0.34
SSBP1-215ENST00000612337 SSBP1Q04837 148 aaKnown RBP12.95□□□□□ -0.34
SSBP1-215ENST00000612337 Q6ZRM9 215 aa12.95□□□□□ -0.34
SSBP1-215ENST00000612337 FAM219AQ8IW50 185 aa12.95□□□□□ -0.34
SSBP1-215ENST00000612337 STXBP6Q8NFX7 210 aa12.95□□□□□ -0.34
SSBP1-215ENST00000612337 OR52E5Q8NH55 327 aa12.95□□□□□ -0.34
SSBP1-215ENST00000612337 C2CD4CQ8TF44 421 aa12.95□□□□□ -0.34
SSBP1-215ENST00000612337 TMEM230Q96A57 120 aa12.95□□□□□ -0.34
SSBP1-215ENST00000612337 CCDC59Q9P031 241 aaKnown RBP12.95□□□□□ -0.34
SSBP1-215ENST00000612337 DNAH2Q9P225 4427 aa12.94□□□□□ -0.34
SSBP1-215ENST00000612337 TRAV30A0A087WSZ9 112 aa12.94□□□□□ -0.34
SSBP1-215ENST00000612337 CDS2O95674 445 aa12.94□□□□□ -0.34
SSBP1-215ENST00000612337 RAB3DO95716 219 aa12.94□□□□□ -0.34
SSBP1-215ENST00000612337 GIG44P09565 113 aaPredicted RBP12.94□□□□□ -0.34
SSBP1-215ENST00000612337 HTR2BP41595 481 aa12.94□□□□□ -0.34
SSBP1-215ENST00000612337 TCTAP57738 103 aa12.94□□□□□ -0.34
SSBP1-215ENST00000612337 MRPS10P82664 201 aaKnown RBP12.94□□□□□ -0.34
SSBP1-215ENST00000612337 TMEM41BQ5BJD5 291 aa12.94□□□□□ -0.34
SSBP1-215ENST00000612337 STEAP1BQ6NZ63 245 aa12.94□□□□□ -0.34
SSBP1-215ENST00000612337 TRPT1Q86TN4 253 aaKnown RBP12.94□□□□□ -0.34
SSBP1-215ENST00000612337 Q8NAQ8 132 aa12.94□□□□□ -0.34
SSBP1-215ENST00000612337 MARCH1Q8TCQ1 289 aa12.94□□□□□ -0.34
SSBP1-215ENST00000612337 NARS2Q96I59 477 aaKnown RBP12.94□□□□□ -0.34
SSBP1-215ENST00000612337 TMEM222Q9H0R3 208 aa12.94□□□□□ -0.34
SSBP1-215ENST00000612337 RPS10-NUDT3A0A1W2PQS6 291 aa12.93□□□□□ -0.34
SSBP1-215ENST00000612337 OR5AC1P0C628 307 aa12.93□□□□□ -0.34
SSBP1-215ENST00000612337 SPP1P10451 314 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms