RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 PGLYRP4Q96LB8 373 aa7.12□□□□□ -1.27
LIG4-204ENST00000611712 NDFIP1Q9BT67 221 aa7.12□□□□□ -1.27
LIG4-204ENST00000611712 CLEC7AQ9BXN2 247 aa7.12□□□□□ -1.27
LIG4-204ENST00000611712 FBXL15Q9H469 300 aa7.12□□□□□ -1.27
LIG4-204ENST00000611712 THYN1Q9P016 225 aa7.12□□□□□ -1.27
LIG4-204ENST00000611712 TBL2Q9Y4P3 447 aaKnown RBP7.12□□□□□ -1.27
LIG4-204ENST00000611712 CD33P20138 364 aa7.11□□□□□ -1.27
LIG4-204ENST00000611712 PLA2G5P39877 138 aa7.11□□□□□ -1.27
LIG4-204ENST00000611712 ARF6P62330 175 aa7.11□□□□□ -1.27
LIG4-204ENST00000611712 SPATA45Q537H7 98 aa7.11□□□□□ -1.27
LIG4-204ENST00000611712 ZNF600Q6ZNG1 722 aa7.11□□□□□ -1.27
LIG4-204ENST00000611712 ATOH7Q8N100 152 aa7.11□□□□□ -1.27
LIG4-204ENST00000611712 LINC01560Q8TB33 94 aa7.11□□□□□ -1.27
LIG4-204ENST00000611712 C5orf30Q96GV9 206 aa7.11□□□□□ -1.27
LIG4-204ENST00000611712 ATG101Q9BSB4 218 aa7.11□□□□□ -1.27
LIG4-204ENST00000611712 OSTCQ9NRP0 149 aa7.11□□□□□ -1.27
LIG4-204ENST00000611712 RNF24Q9Y225 148 aa7.11□□□□□ -1.27
LIG4-204ENST00000611712 MALRD1Q5VYJ5 2156 aa7.11□□□□□ -1.27
LIG4-204ENST00000611712 A0A1B0GUS0 222 aa7.11□□□□□ -1.27
LIG4-204ENST00000611712 ZNF785A8K8V0 405 aa7.11□□□□□ -1.27
LIG4-204ENST00000611712 NDUFS6O75380 124 aaKnown RBP7.11□□□□□ -1.27
LIG4-204ENST00000611712 AREGP15514 252 aa7.11□□□□□ -1.27
LIG4-204ENST00000611712 CA7P43166 264 aa7.11□□□□□ -1.27
LIG4-204ENST00000611712 TAS2R60P59551 318 aa7.11□□□□□ -1.27
LIG4-204ENST00000611712 C17orf58Q2M2W7 97 aa7.11□□□□□ -1.27
LIG4-204ENST00000611712 TMEM200BQ69YZ2 307 aa7.11□□□□□ -1.27
LIG4-204ENST00000611712 SLC25A48Q6ZT89 311 aaKnown RBP7.11□□□□□ -1.27
LIG4-204ENST00000611712 SMIM15Q7Z3B0 74 aa7.11□□□□□ -1.27
LIG4-204ENST00000611712 FAM19A2Q8N3H0 131 aa7.11□□□□□ -1.27
LIG4-204ENST00000611712 PNKDQ8N490 385 aa7.11□□□□□ -1.27
LIG4-204ENST00000611712 SCNM1Q9BWG6 230 aa7.11□□□□□ -1.27
LIG4-204ENST00000611712 TMEM14BQ9NUH8 114 aa7.11□□□□□ -1.27
LIG4-204ENST00000611712 TMSB15BA0A087X1C1 80 aa7.11□□□□□ -1.27
LIG4-204ENST00000611712 CFHR2P36980 270 aa7.11□□□□□ -1.27
LIG4-204ENST00000611712 PPOXP50336 477 aa7.11□□□□□ -1.27
LIG4-204ENST00000611712 GNG5P63218 68 aa7.11□□□□□ -1.27
LIG4-204ENST00000611712 TBR1Q16650 682 aa7.11□□□□□ -1.27
LIG4-204ENST00000611712 Q6ZS92 163 aa7.11□□□□□ -1.27
LIG4-204ENST00000611712 C14orf144Q96I85 54 aa7.11□□□□□ -1.27
LIG4-204ENST00000611712 PRO3102Q9H379 93 aa7.11□□□□□ -1.27
LIG4-204ENST00000611712 HIF1ANQ9NWT6 349 aa7.11□□□□□ -1.27
LIG4-204ENST00000611712 OTOGLQ3ZCN5 2332 aa7.11□□□□□ -1.27
LIG4-204ENST00000611712 TNCP24821 2201 aa7.1□□□□□ -1.27
LIG4-204ENST00000611712 C9JCJ5 164 aa7.1□□□□□ -1.27
LIG4-204ENST00000611712 APOBEC3AP31941 199 aaPredicted RBP7.1□□□□□ -1.27
LIG4-204ENST00000611712 FOXA3P55318 350 aaPredicted RBP7.1□□□□□ -1.27
LIG4-204ENST00000611712 LOXL3P58215 753 aa7.1□□□□□ -1.27
LIG4-204ENST00000611712 MUC15Q8N387 334 aa7.1□□□□□ -1.27
LIG4-204ENST00000611712 ZNF664Q8N3J9 261 aa7.1□□□□□ -1.27
LIG4-204ENST00000611712 SLC25A33Q9BSK2 321 aa7.1□□□□□ -1.27
LIG4-204ENST00000611712 B9A039 149 aa7.1□□□□□ -1.27
LIG4-204ENST00000611712 LYNX1G3V0Z9 82 aa7.1□□□□□ -1.27
LIG4-204ENST00000611712 ITGB1BP1O14713 200 aa7.1□□□□□ -1.27
LIG4-204ENST00000611712 MMP23AO75900 390 aa7.1□□□□□ -1.27
LIG4-204ENST00000611712 LYNX1P0DP58 116 aa7.1□□□□□ -1.27
LIG4-204ENST00000611712 GOLT1AQ6ZVE7 132 aa7.1□□□□□ -1.27
LIG4-204ENST00000611712 LHFPL4Q7Z7J7 247 aa7.1□□□□□ -1.27
LIG4-204ENST00000611712 BPIFA4PQ86YQ2 179 aa7.1□□□□□ -1.27
LIG4-204ENST00000611712 RNASE6Q93091 150 aaKnown RBP7.1□□□□□ -1.27
LIG4-204ENST00000611712 TCRBV4S1A1TA0A5B7 111 aa7.1□□□□□ -1.27
LIG4-204ENST00000611712 RIGQ13278 110 aa7.1□□□□□ -1.27
LIG4-204ENST00000611712 VAMP3Q15836 100 aa7.1□□□□□ -1.27
LIG4-204ENST00000611712 LEMD1Q68G75 181 aa7.1□□□□□ -1.27
LIG4-204ENST00000611712 OR4A5Q8NH83 315 aa7.1□□□□□ -1.27
LIG4-204ENST00000611712 COL5A1P20908 1838 aaPredicted RBP7.1□□□□□ -1.27
LIG4-204ENST00000611712 PMS2P5A8MQ11 134 aa7.09□□□□□ -1.27
LIG4-204ENST00000611712 RNASE2P10153 161 aaKnown RBP7.09□□□□□ -1.27
LIG4-204ENST00000611712 SPRNQ5BIV9 151 aa7.09□□□□□ -1.27
LIG4-204ENST00000611712 GRAMD2BQ96HH9 432 aa7.09□□□□□ -1.27
LIG4-204ENST00000611712 RBM14Q96PK6 669 aaKnown RBP7.09□□□□□ -1.27
LIG4-204ENST00000611712 WNT10AQ9GZT5 417 aa7.09□□□□□ -1.27
LIG4-204ENST00000611712 TMEM191AQ9H0A3 160 aa7.09□□□□□ -1.27
LIG4-204ENST00000611712 CHODLQ9H9P2 273 aa7.09□□□□□ -1.27
LIG4-204ENST00000611712 PRRC2CQ9Y520 2896 aaKnown RBP7.09□□□□□ -1.27
LIG4-204ENST00000611712 IZUMO1RA6ND01 250 aa7.09□□□□□ -1.27
LIG4-204ENST00000611712 DPRXA6NFQ7 191 aa7.09□□□□□ -1.27
LIG4-204ENST00000611712 H0YJW9 148 aa7.09□□□□□ -1.27
LIG4-204ENST00000611712 FCGR2BP31994 310 aaPredicted RBP7.09□□□□□ -1.27
LIG4-204ENST00000611712 GPR6P46095 362 aaPredicted RBP7.09□□□□□ -1.27
LIG4-204ENST00000611712 RPL11P62913 178 aaKnown RBP7.09□□□□□ -1.27
LIG4-204ENST00000611712 ADIPOQQ15848 244 aa7.09□□□□□ -1.27
LIG4-204ENST00000611712 VWC2Q2TAL6 325 aa7.09□□□□□ -1.27
LIG4-204ENST00000611712 AARDQ4LEZ3 155 aa7.09□□□□□ -1.27
LIG4-204ENST00000611712 C5orf17Q8NAS9 161 aa7.09□□□□□ -1.27
LIG4-204ENST00000611712 TMUB1Q9BVT8 246 aa7.09□□□□□ -1.27
LIG4-204ENST00000611712 GNB1LQ9BYB4 327 aa7.09□□□□□ -1.27
LIG4-204ENST00000611712 NRN1Q9NPD7 142 aa7.09□□□□□ -1.27
LIG4-204ENST00000611712 CACNA1BQ00975 2339 aa7.09□□□□□ -1.27
LIG4-204ENST00000611712 HIGD1CA8MV81 97 aa7.09□□□□□ -1.27
LIG4-204ENST00000611712 TMEM178BH3BS89 294 aa7.09□□□□□ -1.27
LIG4-204ENST00000611712 TYMSP04818 313 aa7.09□□□□□ -1.27
LIG4-204ENST00000611712 TMEM133Q9H2Q1 129 aa7.09□□□□□ -1.27
LIG4-204ENST00000611712 FAM215AQ9Y5M1 114 aa7.09□□□□□ -1.27
LIG4-204ENST00000611712 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.09□□□□□ -1.28
LIG4-204ENST00000611712 A0A0G2JNJ9 132 aa7.09□□□□□ -1.28
LIG4-204ENST00000611712 NPPCP23582 126 aa7.09□□□□□ -1.28
LIG4-204ENST00000611712 GATA4P43694 442 aa7.09□□□□□ -1.28
LIG4-204ENST00000611712 CTAG1AP78358 180 aa7.09□□□□□ -1.28
LIG4-204ENST00000611712 COL5A1-AS1Q5SY13 56 aa7.09□□□□□ -1.28
LIG4-204ENST00000611712 DKK4Q9UBT3 224 aa7.09□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms