RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 SULT1A3P0DMM9 295 aa14.44□□□□□ -0.1
TCF3-219ENST00000610756 SULT1A4P0DMN0 295 aa14.44□□□□□ -0.1
TCF3-219ENST00000610756 SRPXP78539 464 aa14.44□□□□□ -0.1
TCF3-219ENST00000610756 LYZL2Q7Z4W2 148 aa14.44□□□□□ -0.1
TCF3-219ENST00000610756 LGI3Q8N145 548 aa14.44□□□□□ -0.1
TCF3-219ENST00000610756 SPAG8Q99932 426 aaPredicted RBP14.44□□□□□ -0.1
TCF3-219ENST00000610756 SPATA25Q9BR10 227 aa14.44□□□□□ -0.1
TCF3-219ENST00000610756 SRRQ9GZT4 340 aa14.44□□□□□ -0.1
TCF3-219ENST00000610756 HEYLQ9NQ87 328 aaPredicted RBP14.44□□□□□ -0.1
TCF3-219ENST00000610756 PRR13Q9NZ81 148 aa14.44□□□□□ -0.1
TCF3-219ENST00000610756 NBEAL2Q6ZNJ1 2754 aa14.44□□□□□ -0.1
TCF3-219ENST00000610756 RBMY1BA6NDE4 496 aaKnown RBP14.43□□□□□ -0.1
TCF3-219ENST00000610756 RBMY1EA6NEQ0 496 aaKnown RBP14.43□□□□□ -0.1
TCF3-219ENST00000610756 ZNF207O43670 478 aaKnown RBP14.43□□□□□ -0.1
TCF3-219ENST00000610756 RBMY1DP0C7P1 496 aaKnown RBP14.43□□□□□ -0.1
TCF3-219ENST00000610756 CCR6P51684 374 aa14.43□□□□□ -0.1
TCF3-219ENST00000610756 MLANAQ16655 118 aa14.43□□□□□ -0.1
TCF3-219ENST00000610756 C2orf83Q53S99 150 aa14.43□□□□□ -0.1
TCF3-219ENST00000610756 FNDC4Q9H6D8 234 aaPredicted RBP14.43□□□□□ -0.1
TCF3-219ENST00000610756 SRD5A3Q9H8P0 318 aa14.43□□□□□ -0.1
TCF3-219ENST00000610756 TRAV14DV4A0A0A6YYC5 116 aa14.42□□□□□ -0.1
TCF3-219ENST00000610756 IGHV7-4-1A0A0J9YVY3 117 aa14.42□□□□□ -0.1
TCF3-219ENST00000610756 TOMM20LQ6UXN7 152 aa14.42□□□□□ -0.1
TCF3-219ENST00000610756 OR4X1Q8NH49 305 aa14.42□□□□□ -0.1
TCF3-219ENST00000610756 WFDC10AQ9H1F0 79 aa14.42□□□□□ -0.1
TCF3-219ENST00000610756 HIPK2Q9H2X6 1198 aa14.42□□□□□ -0.1
TCF3-219ENST00000610756 DNAH7Q8WXX0 4024 aa14.42□□□□□ -0.1
TCF3-219ENST00000610756 CEBPZOSA8MTT3 80 aa14.41□□□□□ -0.1
TCF3-219ENST00000610756 CHEK1O14757 476 aa14.41□□□□□ -0.1
TCF3-219ENST00000610756 CLN5O75503 358 aa14.41□□□□□ -0.1
TCF3-219ENST00000610756 OPRK1P41145 380 aa14.41□□□□□ -0.1
TCF3-219ENST00000610756 SMCO1Q147U7 214 aa14.41□□□□□ -0.1
TCF3-219ENST00000610756 BAK1Q16611 211 aa14.41□□□□□ -0.1
TCF3-219ENST00000610756 ZNF600Q6ZNG1 722 aa14.41□□□□□ -0.1
TCF3-219ENST00000610756 TMED4Q7Z7H5 227 aa14.41□□□□□ -0.1
TCF3-219ENST00000610756 LRTM2Q8N967 370 aa14.41□□□□□ -0.1
TCF3-219ENST00000610756 TMEM116Q8NCL8 245 aa14.41□□□□□ -0.1
TCF3-219ENST00000610756 RNASEH2CQ8TDP1 164 aaKnown RBP14.41□□□□□ -0.1
TCF3-219ENST00000610756 CITED4Q96RK1 184 aa14.41□□□□□ -0.1
TCF3-219ENST00000610756 RHPN1-AS1Q9BWJ2 59 aa14.41□□□□□ -0.1
TCF3-219ENST00000610756 HSPB7Q9UBY9 170 aa14.41□□□□□ -0.1
TCF3-219ENST00000610756 A0A1B0GU03 582 aa14.41□□□□□ -0.1
TCF3-219ENST00000610756 DUXBA0A1W2PPF3 345 aa14.41□□□□□ -0.1
TCF3-219ENST00000610756 C3orf84H3BNL1 204 aa14.41□□□□□ -0.1
TCF3-219ENST00000610756 TNFRSF9Q07011 255 aa14.41□□□□□ -0.1
TCF3-219ENST00000610756 NOXA1Q86UR1 476 aa14.41□□□□□ -0.1
TCF3-219ENST00000610756 GINS3Q9BRX5 216 aa14.41□□□□□ -0.1
TCF3-219ENST00000610756 MRPL36Q9P0J6 103 aaKnown RBP14.41□□□□□ -0.1
TCF3-219ENST00000610756 RPS10-NUDT3A0A1W2PQS6 291 aa14.4□□□□□ -0.1
TCF3-219ENST00000610756 SLC24A4Q8NFF2 622 aa14.4□□□□□ -0.1
TCF3-219ENST00000610756 RNF2Q99496 336 aa14.4□□□□□ -0.1
TCF3-219ENST00000610756 PUS1Q9Y606 427 aaKnown RBP eCLIP14.4□□□□□ -0.1
TCF3-219ENST00000610756 U3KQ87 197 aa14.4□□□□□ -0.1
TCF3-219ENST00000610756 KMT2CQ8NEZ4 4911 aaKnown RBP14.39□□□□□ -0.11
TCF3-219ENST00000610756 TRAV30A0A087WSZ9 112 aa14.39□□□□□ -0.11
TCF3-219ENST00000610756 NAP1L6A6NFF2 107 aa14.39□□□□□ -0.11
TCF3-219ENST00000610756 CD5P06127 495 aa14.39□□□□□ -0.11
TCF3-219ENST00000610756 INPP1P49441 399 aa14.39□□□□□ -0.11
TCF3-219ENST00000610756 RBMS2Q15434 407 aaKnown RBP14.39□□□□□ -0.11
TCF3-219ENST00000610756 TMEM170AQ8WVE7 144 aa14.39□□□□□ -0.11
TCF3-219ENST00000610756 FAM110AQ9BQ89 295 aa14.39□□□□□ -0.11
TCF3-219ENST00000610756 ZFAND3Q9H8U3 227 aa14.39□□□□□ -0.11
TCF3-219ENST00000610756 OR4C46A6NHA9 309 aa14.38□□□□□ -0.11
TCF3-219ENST00000610756 SCGB2A1O75556 95 aa14.38□□□□□ -0.11
TCF3-219ENST00000610756 NXPH3O95157 252 aa14.38□□□□□ -0.11
TCF3-219ENST00000610756 SFT2D2O95562 160 aa14.38□□□□□ -0.11
TCF3-219ENST00000610756 SLC25A4P12235 298 aa14.38□□□□□ -0.11
TCF3-219ENST00000610756 VAMP1P23763 118 aa14.38□□□□□ -0.11
TCF3-219ENST00000610756 ATP5IP56385 69 aaPredicted RBP14.38□□□□□ -0.11
TCF3-219ENST00000610756 TRIQKQ629K1 86 aa14.38□□□□□ -0.11
TCF3-219ENST00000610756 FAM90A2PQ658T7 463 aa14.38□□□□□ -0.11
TCF3-219ENST00000610756 PRSS54Q6PEW0 395 aa14.38□□□□□ -0.11
TCF3-219ENST00000610756 CENPSQ8N2Z9 138 aa14.38□□□□□ -0.11
TCF3-219ENST00000610756 MUC7Q8TAX7 377 aa14.38□□□□□ -0.11
TCF3-219ENST00000610756 SDHCQ99643 169 aaPredicted RBP14.38□□□□□ -0.11
TCF3-219ENST00000610756 IGHV3-49A0A0A0MS15 119 aa14.37□□□□□ -0.11
TCF3-219ENST00000610756 PITX3O75364 302 aa14.37□□□□□ -0.11
TCF3-219ENST00000610756 IGKV1-17P01599 117 aa14.37□□□□□ -0.11
TCF3-219ENST00000610756 SLC25A6P12236 298 aa14.37□□□□□ -0.11
TCF3-219ENST00000610756 NPY1RP25929 384 aa14.37□□□□□ -0.11
TCF3-219ENST00000610756 BMI1P35226 326 aa14.37□□□□□ -0.11
TCF3-219ENST00000610756 UBE2MP61081 183 aaKnown RBP14.37□□□□□ -0.11
TCF3-219ENST00000610756 ETFRF1Q6IPR1 90 aa14.37□□□□□ -0.11
TCF3-219ENST00000610756 DTD1Q8TEA8 209 aa14.37□□□□□ -0.11
TCF3-219ENST00000610756 RBKSQ9H477 322 aa14.37□□□□□ -0.11
TCF3-219ENST00000610756 VSIRQ9H7M9 311 aa14.37□□□□□ -0.11
TCF3-219ENST00000610756 EDA2RQ9HAV5 297 aa14.37□□□□□ -0.11
TCF3-219ENST00000610756 TMED3Q9Y3Q3 217 aa14.37□□□□□ -0.11
TCF3-219ENST00000610756 LOC102724200A0A096LPH7 203 aaPredicted RBP14.36□□□□□ -0.11
TCF3-219ENST00000610756 IFNA10P01566 189 aa14.36□□□□□ -0.11
TCF3-219ENST00000610756 PPP1R1AQ13522 171 aa14.36□□□□□ -0.11
TCF3-219ENST00000610756 OR1S1Q8NH92 325 aa14.36□□□□□ -0.11
TCF3-219ENST00000610756 GGTLC1Q9BX51 225 aa14.36□□□□□ -0.11
TCF3-219ENST00000610756 IGHV3OR16-13A0A075B7E8 117 aa14.35□□□□□ -0.11
TCF3-219ENST00000610756 IGHV3-74A0A0B4J1X5 117 aa14.35□□□□□ -0.11
TCF3-219ENST00000610756 NDUFB6O95139 128 aa14.35□□□□□ -0.11
TCF3-219ENST00000610756 APOHP02749 345 aaPredicted RBP14.35□□□□□ -0.11
TCF3-219ENST00000610756 IGLC1P0CG04 106 aa14.35□□□□□ -0.11
TCF3-219ENST00000610756 NPPCP23582 126 aa14.35□□□□□ -0.11
TCF3-219ENST00000610756 CMC4P56277 68 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms