RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 CIARTQ8N365 385 aaPredicted RBP10.97□□□□□ -0.65
USP6NL-205ENST00000609104 ZNF703Q9H7S9 590 aaPredicted RBP10.97□□□□□ -0.65
USP6NL-205ENST00000609104 COL11A2P13942 1736 aaPredicted RBP10.97□□□□□ -0.65
USP6NL-205ENST00000609104 SRSF4Q08170 494 aaKnown RBP10.97□□□□□ -0.65
USP6NL-205ENST00000609104 LDLRAD2Q5SZI1 272 aa10.97□□□□□ -0.65
USP6NL-205ENST00000609104 FAM216BQ8N7L0 139 aa10.97□□□□□ -0.65
USP6NL-205ENST00000609104 WFDC12Q8WWY7 111 aa10.97□□□□□ -0.65
USP6NL-205ENST00000609104 CHTOPQ9Y3Y2 248 aaKnown RBP10.97□□□□□ -0.65
USP6NL-205ENST00000609104 NPC2P61916 151 aa10.97□□□□□ -0.65
USP6NL-205ENST00000609104 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.97□□□□□ -0.65
USP6NL-205ENST00000609104 PRDM13Q9H4Q3 707 aa10.97□□□□□ -0.65
USP6NL-205ENST00000609104 A0A0U1RRA0 63 aa10.97□□□□□ -0.65
USP6NL-205ENST00000609104 NPIPB13A6NJU9 1138 aa10.97□□□□□ -0.65
USP6NL-205ENST00000609104 CELA3BP08861 270 aa10.97□□□□□ -0.65
USP6NL-205ENST00000609104 TMEM170AQ8WVE7 144 aa10.97□□□□□ -0.65
USP6NL-205ENST00000609104 CACNG8Q8WXS5 425 aa10.97□□□□□ -0.65
USP6NL-205ENST00000609104 EFEMP2O95967 443 aa10.97□□□□□ -0.65
USP6NL-205ENST00000609104 IFI6P09912 130 aa10.96□□□□□ -0.65
USP6NL-205ENST00000609104 DEPPQ9NTK1 212 aa10.96□□□□□ -0.65
USP6NL-205ENST00000609104 SLC25A2Q9BXI2 301 aa10.96□□□□□ -0.65
USP6NL-205ENST00000609104 CD24P25063 80 aa10.96□□□□□ -0.65
USP6NL-205ENST00000609104 TMEM155Q4W5P6 130 aa10.96□□□□□ -0.65
USP6NL-205ENST00000609104 ARFGEF3Q5TH69 2177 aa10.96□□□□□ -0.66
USP6NL-205ENST00000609104 RNF222A6NCQ9 220 aa10.96□□□□□ -0.66
USP6NL-205ENST00000609104 PRR32B1ATL7 298 aa10.96□□□□□ -0.66
USP6NL-205ENST00000609104 UMODP07911 640 aa10.96□□□□□ -0.66
USP6NL-205ENST00000609104 TRPM7Q96QT4 1865 aa10.96□□□□□ -0.66
USP6NL-205ENST00000609104 LHX2P50458 406 aa10.95□□□□□ -0.66
USP6NL-205ENST00000609104 PLXND1Q9Y4D7 1925 aa10.95□□□□□ -0.66
USP6NL-205ENST00000609104 A0A0G2JMM0 328 aa10.95□□□□□ -0.66
USP6NL-205ENST00000609104 A0A1W2PPB8 328 aa10.95□□□□□ -0.66
USP6NL-205ENST00000609104 A0A1W2PRS3 328 aa10.95□□□□□ -0.66
USP6NL-205ENST00000609104 KIR3DP1A8MWS1 328 aa10.95□□□□□ -0.66
USP6NL-205ENST00000609104 IGHV1-2P23083 117 aa10.95□□□□□ -0.66
USP6NL-205ENST00000609104 CCL20P78556 96 aa10.95□□□□□ -0.66
USP6NL-205ENST00000609104 PSG7Q13046 419 aa10.95□□□□□ -0.66
USP6NL-205ENST00000609104 C1QL4Q86Z23 238 aa10.95□□□□□ -0.66
USP6NL-205ENST00000609104 LHFPL4Q7Z7J7 247 aa10.95□□□□□ -0.66
USP6NL-205ENST00000609104 RTN4RL2Q86UN3 420 aa10.95□□□□□ -0.66
USP6NL-205ENST00000609104 LOXL4Q96JB6 756 aa10.95□□□□□ -0.66
USP6NL-205ENST00000609104 IGKCP01834 107 aa10.95□□□□□ -0.66
USP6NL-205ENST00000609104 SCN10AQ9Y5Y9 1956 aa10.95□□□□□ -0.66
USP6NL-205ENST00000609104 FAM168AQ92567 244 aa10.95□□□□□ -0.66
USP6NL-205ENST00000609104 ASCL2Q99929 193 aa10.95□□□□□ -0.66
USP6NL-205ENST00000609104 COLQQ9Y215 455 aaPredicted RBP10.95□□□□□ -0.66
USP6NL-205ENST00000609104 CHCHD2Q9Y6H1 151 aaPredicted RBP10.95□□□□□ -0.66
USP6NL-205ENST00000609104 COLCA1Q6ZS62 124 aa10.95□□□□□ -0.66
USP6NL-205ENST00000609104 C1QTNF5Q9BXJ0 243 aa10.95□□□□□ -0.66
USP6NL-205ENST00000609104 NXT2Q9NPJ8 142 aaKnown RBP10.95□□□□□ -0.66
USP6NL-205ENST00000609104 EPDR1Q9UM22 224 aa10.95□□□□□ -0.66
USP6NL-205ENST00000609104 A6NNC1 897 aa10.94□□□□□ -0.66
USP6NL-205ENST00000609104 TMEM167AQ8TBQ9 72 aa10.94□□□□□ -0.66
USP6NL-205ENST00000609104 HBDP02042 147 aa10.94□□□□□ -0.66
USP6NL-205ENST00000609104 ZNF688P0C7X2 276 aa10.94□□□□□ -0.66
USP6NL-205ENST00000609104 SP7Q8TDD2 431 aaPredicted RBP10.94□□□□□ -0.66
USP6NL-205ENST00000609104 SPSB2Q99619 263 aa10.94□□□□□ -0.66
USP6NL-205ENST00000609104 SP9P0CG40 484 aa10.94□□□□□ -0.66
USP6NL-205ENST00000609104 PYYP10082 97 aa10.94□□□□□ -0.66
USP6NL-205ENST00000609104 GZMBP10144 247 aa10.94□□□□□ -0.66
USP6NL-205ENST00000609104 NEU4Q8WWR8 484 aaPredicted RBP10.94□□□□□ -0.66
USP6NL-205ENST00000609104 ZNF837Q96EG3 531 aaPredicted RBP10.94□□□□□ -0.66
USP6NL-205ENST00000609104 SAA2-SAA4A0A096LPE2 208 aa10.94□□□□□ -0.66
USP6NL-205ENST00000609104 SAA2P0DJI9 122 aaPredicted RBP10.94□□□□□ -0.66
USP6NL-205ENST00000609104 SEPSECSQ9HD40 501 aaKnown RBP10.94□□□□□ -0.66
USP6NL-205ENST00000609104 FOXL1Q12952 345 aa10.94□□□□□ -0.66
USP6NL-205ENST00000609104 ZIC4Q8N9L1 334 aa10.94□□□□□ -0.66
USP6NL-205ENST00000609104 WDR81Q562E7 1941 aa10.94□□□□□ -0.66
USP6NL-205ENST00000609104 SAMD5Q5TGI4 173 aa10.94□□□□□ -0.66
USP6NL-205ENST00000609104 SPTBN1Q01082 2364 aaKnown RBP10.94□□□□□ -0.66
USP6NL-205ENST00000609104 OR4X2Q8NGF9 303 aa10.94□□□□□ -0.66
USP6NL-205ENST00000609104 OCC1Q8TAD7 63 aa10.94□□□□□ -0.66
USP6NL-205ENST00000609104 PEMTQ9UBM1 199 aa10.93□□□□□ -0.66
USP6NL-205ENST00000609104 IGHV2OR16-5A0A0B4J2B6 119 aa10.93□□□□□ -0.66
USP6NL-205ENST00000609104 GNB1LQ9BYB4 327 aa10.93□□□□□ -0.66
USP6NL-205ENST00000609104 TRAV9-2A0A087WT02 112 aa10.93□□□□□ -0.66
USP6NL-205ENST00000609104 PSMG4Q5JS54 123 aa10.93□□□□□ -0.66
USP6NL-205ENST00000609104 C7orf69Q9H7B7 122 aa10.93□□□□□ -0.66
USP6NL-205ENST00000609104 TFF1P04155 84 aa10.93□□□□□ -0.66
USP6NL-205ENST00000609104 CCL3L1P16619 93 aa10.93□□□□□ -0.66
USP6NL-205ENST00000609104 TMEM144Q7Z5S9 345 aa10.93□□□□□ -0.66
USP6NL-205ENST00000609104 DEFB104AQ8WTQ1 72 aa10.93□□□□□ -0.66
USP6NL-205ENST00000609104 TDGF1P3P51864 188 aa10.93□□□□□ -0.66
USP6NL-205ENST00000609104 C15orf61A6NNL5 157 aa10.93□□□□□ -0.66
USP6NL-205ENST00000609104 ORAOV1Q8WV07 137 aa10.93□□□□□ -0.66
USP6NL-205ENST00000609104 NDUFAF3Q9BU61 184 aa10.93□□□□□ -0.66
USP6NL-205ENST00000609104 BRWD3Q6RI45 1802 aa10.93□□□□□ -0.66
USP6NL-205ENST00000609104 ADARB2-AS1A8MUL3 147 aa10.93□□□□□ -0.66
USP6NL-205ENST00000609104 CD28P10747 220 aa10.93□□□□□ -0.66
USP6NL-205ENST00000609104 ERVK11-1P61568 191 aa10.92□□□□□ -0.66
USP6NL-205ENST00000609104 PPP1R32Q7Z5V6 425 aa10.92□□□□□ -0.66
USP6NL-205ENST00000609104 YAE1D1Q9NRH1 226 aa10.92□□□□□ -0.66
USP6NL-205ENST00000609104 GHRHP01286 108 aa10.92□□□□□ -0.66
USP6NL-205ENST00000609104 PLNP26678 52 aa10.92□□□□□ -0.66
USP6NL-205ENST00000609104 CYSLTR1Q9Y271 337 aa10.92□□□□□ -0.66
USP6NL-205ENST00000609104 SELENOKQ9Y6D0 94 aa10.92□□□□□ -0.66
USP6NL-205ENST00000609104 WNK2Q9Y3S1 2297 aa10.92□□□□□ -0.66
USP6NL-205ENST00000609104 IQCF6A8MYZ5 107 aa10.92□□□□□ -0.66
USP6NL-205ENST00000609104 HIST1H2BKO60814 126 aa10.92□□□□□ -0.66
USP6NL-205ENST00000609104 HIST1H2BJP06899 126 aa10.92□□□□□ -0.66
USP6NL-205ENST00000609104 HIST1H2BOP23527 126 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms