RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 CLN5O75503 358 aa9.75□□□□□ -0.85
POLR2J3-219ENST00000608621 ATG12O94817 140 aa9.75□□□□□ -0.85
POLR2J3-219ENST00000608621 CD3DP04234 171 aa9.75□□□□□ -0.85
POLR2J3-219ENST00000608621 PPP5CP53041 499 aa9.75□□□□□ -0.85
POLR2J3-219ENST00000608621 SP6Q3SY56 376 aa9.75□□□□□ -0.85
POLR2J3-219ENST00000608621 RNASE10Q5GAN6 216 aaKnown RBP9.75□□□□□ -0.85
POLR2J3-219ENST00000608621 TMEM230Q96A57 120 aa9.75□□□□□ -0.85
POLR2J3-219ENST00000608621 A0A0G2JRQ6 117 aa9.74□□□□□ -0.85
POLR2J3-219ENST00000608621 K7EQG2 157 aa9.74□□□□□ -0.85
POLR2J3-219ENST00000608621 CORTO00230 105 aa9.74□□□□□ -0.85
POLR2J3-219ENST00000608621 TNFAIP8O95379 198 aa9.74□□□□□ -0.85
POLR2J3-219ENST00000608621 GIG44P09565 113 aaPredicted RBP9.74□□□□□ -0.85
POLR2J3-219ENST00000608621 CRYBB3P26998 211 aa9.74□□□□□ -0.85
POLR2J3-219ENST00000608621 HOXA1P49639 335 aaPredicted RBP9.74□□□□□ -0.85
POLR2J3-219ENST00000608621 RORCP51449 518 aa9.74□□□□□ -0.85
POLR2J3-219ENST00000608621 PRR20EP86478 221 aa9.74□□□□□ -0.85
POLR2J3-219ENST00000608621 PRR20CP86479 221 aa9.74□□□□□ -0.85
POLR2J3-219ENST00000608621 PRR20DP86480 221 aa9.74□□□□□ -0.85
POLR2J3-219ENST00000608621 PRR20BP86481 221 aa9.74□□□□□ -0.85
POLR2J3-219ENST00000608621 PRR20AP86496 221 aa9.74□□□□□ -0.85
POLR2J3-219ENST00000608621 TRIM16LQ309B1 348 aa9.74□□□□□ -0.85
POLR2J3-219ENST00000608621 MZT2AQ6P582 158 aa9.74□□□□□ -0.85
POLR2J3-219ENST00000608621 ARRDC1Q8N5I2 433 aa9.74□□□□□ -0.85
POLR2J3-219ENST00000608621 STXBP6Q8NFX7 210 aa9.74□□□□□ -0.85
POLR2J3-219ENST00000608621 OR4X1Q8NH49 305 aa9.74□□□□□ -0.85
POLR2J3-219ENST00000608621 OR52I2Q8NH67 350 aa9.74□□□□□ -0.85
POLR2J3-219ENST00000608621 METTL26Q96S19 204 aa9.74□□□□□ -0.85
POLR2J3-219ENST00000608621 ENY2Q9NPA8 101 aa9.74□□□□□ -0.85
POLR2J3-219ENST00000608621 COPZ2Q9P299 210 aa9.74□□□□□ -0.85
POLR2J3-219ENST00000608621 APLNQ9ULZ1 77 aa9.74□□□□□ -0.85
POLR2J3-219ENST00000608621 VPS13DQ5THJ4 4388 aa9.73□□□□□ -0.85
POLR2J3-219ENST00000608621 KNCNA6PVL3 124 aa9.73□□□□□ -0.85
POLR2J3-219ENST00000608621 IGLL5B9A064 214 aa9.73□□□□□ -0.85
POLR2J3-219ENST00000608621 RBMY1A1P0DJD3 496 aaKnown RBP9.73□□□□□ -0.85
POLR2J3-219ENST00000608621 RBMY1CP0DJD4 496 aa9.73□□□□□ -0.85
POLR2J3-219ENST00000608621 OPRK1P41145 380 aa9.73□□□□□ -0.85
POLR2J3-219ENST00000608621 RPL5P46777 297 aaKnown RBP9.73□□□□□ -0.85
POLR2J3-219ENST00000608621 P2RY1P47900 373 aa9.73□□□□□ -0.85
POLR2J3-219ENST00000608621 TCTAP57738 103 aa9.73□□□□□ -0.85
POLR2J3-219ENST00000608621 RBMY1FQ15415 496 aaKnown RBP9.73□□□□□ -0.85
POLR2J3-219ENST00000608621 TIGITQ495A1 244 aa9.73□□□□□ -0.85
POLR2J3-219ENST00000608621 Q6ZRM9 215 aa9.73□□□□□ -0.85
POLR2J3-219ENST00000608621 TRPT1Q86TN4 253 aaKnown RBP9.73□□□□□ -0.85
POLR2J3-219ENST00000608621 Q8NAQ8 132 aa9.73□□□□□ -0.85
POLR2J3-219ENST00000608621 TERB2Q8NHR7 220 aa9.73□□□□□ -0.85
POLR2J3-219ENST00000608621 ZFAND1Q8TCF1 268 aa9.73□□□□□ -0.85
POLR2J3-219ENST00000608621 RRNAD1Q96FB5 475 aaKnown RBP9.73□□□□□ -0.85
POLR2J3-219ENST00000608621 MTFP1Q9UDX5 166 aa9.73□□□□□ -0.85
POLR2J3-219ENST00000608621 IGHV4-28A0A0C4DH34 117 aa9.72□□□□□ -0.85
POLR2J3-219ENST00000608621 IGKV1-17P01599 117 aa9.72□□□□□ -0.85
POLR2J3-219ENST00000608621 ZNF688P0C7X2 276 aa9.72□□□□□ -0.85
POLR2J3-219ENST00000608621 UCP1P25874 307 aa9.72□□□□□ -0.85
POLR2J3-219ENST00000608621 CCDC71LQ8N9Z2 235 aa9.72□□□□□ -0.85
POLR2J3-219ENST00000608621 OR4D10Q8NGI6 311 aa9.72□□□□□ -0.85
POLR2J3-219ENST00000608621 RNASE11Q8TAA1 199 aaKnown RBP9.72□□□□□ -0.85
POLR2J3-219ENST00000608621 MARCH1Q8TCQ1 289 aa9.72□□□□□ -0.85
POLR2J3-219ENST00000608621 GRAMD2BQ96HH9 432 aa9.72□□□□□ -0.85
POLR2J3-219ENST00000608621 ABHD1Q96SE0 405 aa9.72□□□□□ -0.85
POLR2J3-219ENST00000608621 TRAV30A0A087WSZ9 112 aa9.71□□□□□ -0.86
POLR2J3-219ENST00000608621 C11orf94C9JXX5 98 aa9.71□□□□□ -0.86
POLR2J3-219ENST00000608621 TBPP20226 339 aa9.71□□□□□ -0.86
POLR2J3-219ENST00000608621 HLA-DMBP28068 263 aa9.71□□□□□ -0.86
POLR2J3-219ENST00000608621 BSXQ3C1V8 233 aa9.71□□□□□ -0.86
POLR2J3-219ENST00000608621 SCGB2B2Q4G0G5 96 aa9.71□□□□□ -0.86
POLR2J3-219ENST00000608621 TMEM41BQ5BJD5 291 aa9.71□□□□□ -0.86
POLR2J3-219ENST00000608621 MORN3Q6PF18 240 aaPredicted RBP9.71□□□□□ -0.86
POLR2J3-219ENST00000608621 OR13C8Q8NGS7 320 aa9.71□□□□□ -0.86
POLR2J3-219ENST00000608621 DCANP1Q8TF63 244 aa9.71□□□□□ -0.86
POLR2J3-219ENST00000608621 NARS2Q96I59 477 aaKnown RBP9.71□□□□□ -0.86
POLR2J3-219ENST00000608621 HRH4Q9H3N8 390 aa9.71□□□□□ -0.86
POLR2J3-219ENST00000608621 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.71□□□□□ -0.86
POLR2J3-219ENST00000608621 EXTL2Q9UBQ6 330 aa9.71□□□□□ -0.86
POLR2J3-219ENST00000608621 SCGB2A1O75556 95 aa9.7□□□□□ -0.86
POLR2J3-219ENST00000608621 CDS2O95674 445 aa9.7□□□□□ -0.86
POLR2J3-219ENST00000608621 RAB3DO95716 219 aa9.7□□□□□ -0.86
POLR2J3-219ENST00000608621 CD74P04233 296 aa9.7□□□□□ -0.86
POLR2J3-219ENST00000608621 SPP1P10451 314 aa9.7□□□□□ -0.86
POLR2J3-219ENST00000608621 MIFP14174 115 aa9.7□□□□□ -0.86
POLR2J3-219ENST00000608621 ZNF182P17025 639 aaPredicted RBP9.7□□□□□ -0.86
POLR2J3-219ENST00000608621 C4BPBP20851 252 aa9.7□□□□□ -0.86
POLR2J3-219ENST00000608621 SPCS3P61009 180 aa9.7□□□□□ -0.86
POLR2J3-219ENST00000608621 DHRS2Q13268 280 aa9.7□□□□□ -0.86
POLR2J3-219ENST00000608621 ACTL10Q5JWF8 245 aa9.7□□□□□ -0.86
POLR2J3-219ENST00000608621 TMEM229BQ8NBD8 167 aa9.7□□□□□ -0.86
POLR2J3-219ENST00000608621 Q8WTZ3 238 aa9.7□□□□□ -0.86
POLR2J3-219ENST00000608621 NAA50Q9GZZ1 169 aaKnown RBP9.7□□□□□ -0.86
POLR2J3-219ENST00000608621 TMEM222Q9H0R3 208 aa9.7□□□□□ -0.86
POLR2J3-219ENST00000608621 HEYLQ9NQ87 328 aaPredicted RBP9.7□□□□□ -0.86
POLR2J3-219ENST00000608621 CLEC5AQ9NY25 188 aa9.7□□□□□ -0.86
POLR2J3-219ENST00000608621 U3KQE9 123 aa9.7□□□□□ -0.86
POLR2J3-219ENST00000608621 X6R8D5 127 aa9.7□□□□□ -0.86
POLR2J3-219ENST00000608621 ELOA3CA0A087WX78 387 aaPredicted RBP9.69□□□□□ -0.86
POLR2J3-219ENST00000608621 TEX13DA0A0J9YY54 714 aaPredicted RBP9.69□□□□□ -0.86
POLR2J3-219ENST00000608621 RPS10-NUDT3A0A1W2PQS6 291 aa9.69□□□□□ -0.86
POLR2J3-219ENST00000608621 ZNF705EA8MWA4 302 aaPredicted RBP9.69□□□□□ -0.86
POLR2J3-219ENST00000608621 B3GALNT1O75752 331 aa9.69□□□□□ -0.86
POLR2J3-219ENST00000608621 OR5AC1P0C628 307 aa9.69□□□□□ -0.86
POLR2J3-219ENST00000608621 HTR2BP41595 481 aa9.69□□□□□ -0.86
POLR2J3-219ENST00000608621 TAS2R19P59542 299 aa9.69□□□□□ -0.86
POLR2J3-219ENST00000608621 STEAP1BQ6NZ63 245 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms