RNA–Protein interactions for RNA: ENST00000605457.5

TUBE1-211, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 1,645 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-211ENST00000605457 TMEM213A2RRL7 107 aa10.79□□□□□ -0.68
TUBE1-211ENST00000605457 SPNP16150 400 aa10.79□□□□□ -0.68
TUBE1-211ENST00000605457 EDN2P20800 178 aa10.79□□□□□ -0.68
TUBE1-211ENST00000605457 RNASEH2CQ8TDP1 164 aaKnown RBP10.79□□□□□ -0.68
TUBE1-211ENST00000605457 TMEM190Q8WZ59 177 aa10.79□□□□□ -0.68
TUBE1-211ENST00000605457 PRR25Q96S07 402 aa10.79□□□□□ -0.68
TUBE1-211ENST00000605457 SEC22CQ9BRL7 303 aa10.79□□□□□ -0.68
TUBE1-211ENST00000605457 MRPL36Q9P0J6 103 aaKnown RBP10.79□□□□□ -0.68
TUBE1-211ENST00000605457 U3KQ87 197 aa10.79□□□□□ -0.68
TUBE1-211ENST00000605457 COL7A1Q02388 2944 aa10.79□□□□□ -0.68
TUBE1-211ENST00000605457 NDUFA4O00483 81 aa10.78□□□□□ -0.68
TUBE1-211ENST00000605457 NUPL2O15504 423 aaKnown RBP10.78□□□□□ -0.68
TUBE1-211ENST00000605457 GNG7O60262 68 aa10.78□□□□□ -0.68
TUBE1-211ENST00000605457 IFNA10P01566 189 aa10.78□□□□□ -0.68
TUBE1-211ENST00000605457 IFNA21P01568 189 aa10.78□□□□□ -0.68
TUBE1-211ENST00000605457 FOLR2P14207 255 aa10.78□□□□□ -0.68
TUBE1-211ENST00000605457 NPBWR1P48145 328 aa10.78□□□□□ -0.68
TUBE1-211ENST00000605457 MLANAQ16655 118 aa10.78□□□□□ -0.68
TUBE1-211ENST00000605457 NRARPQ7Z6K4 114 aa10.78□□□□□ -0.68
TUBE1-211ENST00000605457 DUSP18Q8NEJ0 188 aa10.78□□□□□ -0.68
TUBE1-211ENST00000605457 ZNF431Q8TF32 576 aaPredicted RBP10.78□□□□□ -0.68
TUBE1-211ENST00000605457 CACNG8Q8WXS5 425 aa10.78□□□□□ -0.68
TUBE1-211ENST00000605457 SYNGR2O43760 224 aa10.77□□□□□ -0.68
TUBE1-211ENST00000605457 MED6O75586 246 aa10.77□□□□□ -0.68
TUBE1-211ENST00000605457 NOXA1Q86UR1 476 aa10.77□□□□□ -0.68
TUBE1-211ENST00000605457 OR4D5Q8NGN0 318 aa10.77□□□□□ -0.68
TUBE1-211ENST00000605457 MAGT1Q9H0U3 335 aa10.77□□□□□ -0.68
TUBE1-211ENST00000605457 PALMDQ9NP74 551 aa10.77□□□□□ -0.68
TUBE1-211ENST00000605457 RPS10-NUDT3A0A1W2PQS6 291 aa10.76□□□□□ -0.69
TUBE1-211ENST00000605457 LY86O95711 162 aa10.76□□□□□ -0.69
TUBE1-211ENST00000605457 IAPPP10997 89 aa10.76□□□□□ -0.69
TUBE1-211ENST00000605457 CBLN1P23435 193 aa10.76□□□□□ -0.69
TUBE1-211ENST00000605457 ELLP55199 621 aaPredicted RBP10.76□□□□□ -0.69
TUBE1-211ENST00000605457 ATP5IP56385 69 aaPredicted RBP10.76□□□□□ -0.69
TUBE1-211ENST00000605457 DEFA1P59665 94 aa10.76□□□□□ -0.69
TUBE1-211ENST00000605457 DEFA3P59666 94 aa10.76□□□□□ -0.69
TUBE1-211ENST00000605457 ID3Q02535 119 aa10.76□□□□□ -0.69
TUBE1-211ENST00000605457 RELQ04864 619 aaPredicted RBP10.76□□□□□ -0.69
TUBE1-211ENST00000605457 TM4SF20Q53R12 229 aa10.76□□□□□ -0.69
TUBE1-211ENST00000605457 OR4X1Q8NH49 305 aa10.76□□□□□ -0.69
TUBE1-211ENST00000605457 OR10C1Q96KK4 312 aa10.76□□□□□ -0.69
TUBE1-211ENST00000605457 UFC1Q9Y3C8 167 aa10.76□□□□□ -0.69
TUBE1-211ENST00000605457 C15orf62A8K5M9 175 aa10.76□□□□□ -0.69
TUBE1-211ENST00000605457 CLN5O75503 358 aa10.76□□□□□ -0.69
TUBE1-211ENST00000605457 TMEM50AO95807 157 aa10.76□□□□□ -0.69
TUBE1-211ENST00000605457 GP9P14770 177 aa10.76□□□□□ -0.69
TUBE1-211ENST00000605457 IAH1Q2TAA2 248 aaPredicted RBP10.76□□□□□ -0.69
TUBE1-211ENST00000605457 LCN12Q6JVE5 192 aa10.76□□□□□ -0.69
TUBE1-211ENST00000605457 PRSS54Q6PEW0 395 aa10.76□□□□□ -0.69
TUBE1-211ENST00000605457 OR2K2Q8NGT1 345 aa10.76□□□□□ -0.69
TUBE1-211ENST00000605457 CIB3Q96Q77 187 aaPredicted RBP10.76□□□□□ -0.69
TUBE1-211ENST00000605457 DAZ1Q9NQZ3 744 aaKnown RBP10.76□□□□□ -0.69
TUBE1-211ENST00000605457 IGHV3OR16-8A0A075B7F1 116 aa10.75□□□□□ -0.69
TUBE1-211ENST00000605457 IZUMO1RA6ND01 250 aa10.75□□□□□ -0.69
TUBE1-211ENST00000605457 CCSO14618 274 aa10.75□□□□□ -0.69
TUBE1-211ENST00000605457 IL5P05113 134 aa10.75□□□□□ -0.69
TUBE1-211ENST00000605457 C8orf88P0DMB2 117 aa10.75□□□□□ -0.69
TUBE1-211ENST00000605457 SLC25A4P12235 298 aa10.75□□□□□ -0.69
TUBE1-211ENST00000605457 NKX2-1P43699 371 aaPredicted RBP10.75□□□□□ -0.69
TUBE1-211ENST00000605457 DEFB114Q30KQ6 69 aa10.75□□□□□ -0.69
TUBE1-211ENST00000605457 CD300EQ496F6 205 aaPredicted RBP10.75□□□□□ -0.69
TUBE1-211ENST00000605457 C12orf45Q8N5I9 185 aaPredicted RBP10.75□□□□□ -0.69
TUBE1-211ENST00000605457 TMEM116Q8NCL8 245 aa10.75□□□□□ -0.69
TUBE1-211ENST00000605457 DYNLRB2Q8TF09 96 aa10.75□□□□□ -0.69
TUBE1-211ENST00000605457 MARC2Q969Z3 335 aa10.75□□□□□ -0.69
TUBE1-211ENST00000605457 KRTAP3-3Q9BYR6 98 aa10.75□□□□□ -0.69
TUBE1-211ENST00000605457 KRTAP3-2Q9BYR7 98 aa10.75□□□□□ -0.69
TUBE1-211ENST00000605457 TECRQ9NZ01 308 aaKnown RBP10.75□□□□□ -0.69
TUBE1-211ENST00000605457 LSM4Q9Y4Z0 139 aaKnown RBP10.75□□□□□ -0.69
TUBE1-211ENST00000605457 WRBO00258 174 aa10.74□□□□□ -0.69
TUBE1-211ENST00000605457 RND2P52198 227 aa10.74□□□□□ -0.69
TUBE1-211ENST00000605457 POLR2GP62487 172 aaKnown RBP eCLIP10.74□□□□□ -0.69
TUBE1-211ENST00000605457 CD69Q07108 199 aa10.74□□□□□ -0.69
TUBE1-211ENST00000605457 ETFRF1Q6IPR1 90 aa10.74□□□□□ -0.69
TUBE1-211ENST00000605457 ZBTB8BQ8NAP8 495 aaPredicted RBP10.74□□□□□ -0.69
TUBE1-211ENST00000605457 UXS1Q8NBZ7 420 aa10.74□□□□□ -0.69
TUBE1-211ENST00000605457 MARVELD1Q9BSK0 173 aa10.74□□□□□ -0.69
TUBE1-211ENST00000605457 C20orf24Q9BUV8 137 aa10.74□□□□□ -0.69
TUBE1-211ENST00000605457 MRPL27Q9P0M9 148 aaKnown RBP10.74□□□□□ -0.69
TUBE1-211ENST00000605457 MLXQ9UH92 298 aa10.74□□□□□ -0.69
TUBE1-211ENST00000605457 IGKV1-17P01599 117 aa10.73□□□□□ -0.69
TUBE1-211ENST00000605457 IFNA4P05014 189 aa10.73□□□□□ -0.69
TUBE1-211ENST00000605457 DCTN2Q13561 401 aaKnown RBP10.73□□□□□ -0.69
TUBE1-211ENST00000605457 BTNL8Q6UX41 500 aa10.73□□□□□ -0.69
TUBE1-211ENST00000605457 ZNF600Q6ZNG1 722 aa10.73□□□□□ -0.69
TUBE1-211ENST00000605457 SLC16A13Q7RTY0 426 aa10.73□□□□□ -0.69
TUBE1-211ENST00000605457 INMT-MINDY4F8WBC2 141 aa10.73□□□□□ -0.69
TUBE1-211ENST00000605457 K7EMT4 169 aa10.73□□□□□ -0.69
TUBE1-211ENST00000605457 SSSCA1O60232 199 aa10.73□□□□□ -0.69
TUBE1-211ENST00000605457 YIF1AO95070 293 aa10.73□□□□□ -0.69
TUBE1-211ENST00000605457 IGLC1P0CG04 106 aa10.73□□□□□ -0.69
TUBE1-211ENST00000605457 RAB11AP62491 216 aa10.73□□□□□ -0.69
TUBE1-211ENST00000605457 DEFB121Q5J5C9 76 aa10.73□□□□□ -0.69
TUBE1-211ENST00000605457 ZFAND3Q9H8U3 227 aa10.73□□□□□ -0.69
TUBE1-211ENST00000605457 GPN1Q9HCN4 374 aaPredicted RBP10.73□□□□□ -0.69
TUBE1-211ENST00000605457 GSKIPQ9P0R6 139 aa10.73□□□□□ -0.69
TUBE1-211ENST00000605457 TRAV30A0A087WSZ9 112 aa10.72□□□□□ -0.69
TUBE1-211ENST00000605457 H3BP45 60 aa10.72□□□□□ -0.69
TUBE1-211ENST00000605457 ZNF207O43670 478 aaKnown RBP10.72□□□□□ -0.69
TUBE1-211ENST00000605457 PRAF2O60831 178 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms