RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 RBMS2Q15434 407 aaKnown RBP10.84□□□□□ -0.67
TUBE1-208ENST00000604743 ANKRD55Q3KP44 614 aa10.84□□□□□ -0.67
TUBE1-208ENST00000604743 NMSQ5H8A3 153 aa10.84□□□□□ -0.67
TUBE1-208ENST00000604743 DEFB125Q8N687 156 aa10.84□□□□□ -0.67
TUBE1-208ENST00000604743 OR1S1Q8NH92 325 aa10.84□□□□□ -0.67
TUBE1-208ENST00000604743 WFDC10AQ9H1F0 79 aa10.84□□□□□ -0.67
TUBE1-208ENST00000604743 HIPK2Q9H2X6 1198 aa10.84□□□□□ -0.67
TUBE1-208ENST00000604743 FNDC4Q9H6D8 234 aaPredicted RBP10.84□□□□□ -0.67
TUBE1-208ENST00000604743 CENPXA8MT69 81 aa10.83□□□□□ -0.68
TUBE1-208ENST00000604743 OR11H12B2RN74 326 aa10.83□□□□□ -0.68
TUBE1-208ENST00000604743 SFT2D2O95562 160 aa10.83□□□□□ -0.68
TUBE1-208ENST00000604743 IL7P13232 177 aa10.83□□□□□ -0.68
TUBE1-208ENST00000604743 BSXQ3C1V8 233 aa10.83□□□□□ -0.68
TUBE1-208ENST00000604743 PVRIGQ6DKI7 326 aa10.83□□□□□ -0.68
TUBE1-208ENST00000604743 SLC24A4Q8NFF2 622 aa10.83□□□□□ -0.68
TUBE1-208ENST00000604743 OR52B4Q8NGK2 314 aa10.83□□□□□ -0.68
TUBE1-208ENST00000604743 ZNF414Q96IQ9 312 aa10.83□□□□□ -0.68
TUBE1-208ENST00000604743 RBKSQ9H477 322 aa10.83□□□□□ -0.68
TUBE1-208ENST00000604743 ZMAT4Q9H898 229 aa10.83□□□□□ -0.68
TUBE1-208ENST00000604743 MRPL36Q9P0J6 103 aaKnown RBP10.83□□□□□ -0.68
TUBE1-208ENST00000604743 FLVCR2Q9UPI3 526 aa10.83□□□□□ -0.68
TUBE1-208ENST00000604743 IGHV3OR16-13A0A075B7E8 117 aa10.82□□□□□ -0.68
TUBE1-208ENST00000604743 IGHV3-74A0A0B4J1X5 117 aa10.82□□□□□ -0.68
TUBE1-208ENST00000604743 C15orf62A8K5M9 175 aa10.82□□□□□ -0.68
TUBE1-208ENST00000604743 A8MZ25 164 aa10.82□□□□□ -0.68
TUBE1-208ENST00000604743 K7EMT4 169 aa10.82□□□□□ -0.68
TUBE1-208ENST00000604743 TMEM50AO95807 157 aa10.82□□□□□ -0.68
TUBE1-208ENST00000604743 IFNA10P01566 189 aa10.82□□□□□ -0.68
TUBE1-208ENST00000604743 HOXB5P09067 269 aa10.82□□□□□ -0.68
TUBE1-208ENST00000604743 TNFRSF9Q07011 255 aa10.82□□□□□ -0.68
TUBE1-208ENST00000604743 C2orf83Q53S99 150 aa10.82□□□□□ -0.68
TUBE1-208ENST00000604743 SLC16A13Q7RTY0 426 aa10.82□□□□□ -0.68
TUBE1-208ENST00000604743 WWC2-AS2Q96NR7 200 aa10.82□□□□□ -0.68
TUBE1-208ENST00000604743 RCHY1Q96PM5 261 aa10.82□□□□□ -0.68
TUBE1-208ENST00000604743 SRD5A3Q9H8P0 318 aa10.82□□□□□ -0.68
TUBE1-208ENST00000604743 TRAV14DV4A0A0A6YYC5 116 aa10.81□□□□□ -0.68
TUBE1-208ENST00000604743 TRAV25A0A0B4J276 109 aa10.81□□□□□ -0.68
TUBE1-208ENST00000604743 A0A1B0GU03 582 aa10.81□□□□□ -0.68
TUBE1-208ENST00000604743 DUXBA0A1W2PPF3 345 aa10.81□□□□□ -0.68
TUBE1-208ENST00000604743 RPS10-NUDT3A0A1W2PQS6 291 aa10.81□□□□□ -0.68
TUBE1-208ENST00000604743 CLN5O75503 358 aa10.81□□□□□ -0.68
TUBE1-208ENST00000604743 NDUFB6O95139 128 aa10.81□□□□□ -0.68
TUBE1-208ENST00000604743 NPY1RP25929 384 aa10.81□□□□□ -0.68
TUBE1-208ENST00000604743 LAMTOR1Q6IAA8 161 aa10.81□□□□□ -0.68
TUBE1-208ENST00000604743 TOMM20LQ6UXN7 152 aa10.81□□□□□ -0.68
TUBE1-208ENST00000604743 ZNF600Q6ZNG1 722 aa10.81□□□□□ -0.68
TUBE1-208ENST00000604743 TMEM116Q8NCL8 245 aa10.81□□□□□ -0.68
TUBE1-208ENST00000604743 DTD1Q8TEA8 209 aa10.81□□□□□ -0.68
TUBE1-208ENST00000604743 HSPB7Q9UBY9 170 aa10.81□□□□□ -0.68
TUBE1-208ENST00000604743 CACFD1Q9UGQ2 172 aa10.81□□□□□ -0.68
TUBE1-208ENST00000604743 SMPXQ9UHP9 88 aa10.81□□□□□ -0.68
TUBE1-208ENST00000604743 PUS1Q9Y606 427 aaKnown RBP eCLIP10.81□□□□□ -0.68
TUBE1-208ENST00000604743 PIGBOS1A0A0B4J2F0 54 aa10.8□□□□□ -0.68
TUBE1-208ENST00000604743 IGHV7-4-1A0A0J9YVY3 117 aa10.8□□□□□ -0.68
TUBE1-208ENST00000604743 HAGHQ16775 308 aa10.8□□□□□ -0.68
TUBE1-208ENST00000604743 TIGITQ495A1 244 aa10.8□□□□□ -0.68
TUBE1-208ENST00000604743 LRTM2Q8N967 370 aa10.8□□□□□ -0.68
TUBE1-208ENST00000604743 OR4X1Q8NH49 305 aa10.8□□□□□ -0.68
TUBE1-208ENST00000604743 TMEM170AQ8WVE7 144 aa10.8□□□□□ -0.68
TUBE1-208ENST00000604743 RHPN1-AS1Q9BWJ2 59 aa10.8□□□□□ -0.68
TUBE1-208ENST00000604743 PTTG2Q9NZH5 202 aa10.8□□□□□ -0.68
TUBE1-208ENST00000604743 UBQLN2Q9UHD9 624 aa10.8□□□□□ -0.68
TUBE1-208ENST00000604743 IGKV3-7A0A075B6H7 116 aa10.79□□□□□ -0.68
TUBE1-208ENST00000604743 IGHV3-66A0A0C4DH42 116 aa10.79□□□□□ -0.68
TUBE1-208ENST00000604743 C9orf170A2RU37 121 aa10.79□□□□□ -0.68
TUBE1-208ENST00000604743 CHEK1O14757 476 aa10.79□□□□□ -0.68
TUBE1-208ENST00000604743 SCGB2A1O75556 95 aa10.79□□□□□ -0.68
TUBE1-208ENST00000604743 IAPPP10997 89 aa10.79□□□□□ -0.68
TUBE1-208ENST00000604743 ANXA7P20073 488 aaKnown RBP10.79□□□□□ -0.68
TUBE1-208ENST00000604743 BTCP35070 178 aa10.79□□□□□ -0.68
TUBE1-208ENST00000604743 RND2P52198 227 aa10.79□□□□□ -0.68
TUBE1-208ENST00000604743 CNPY1Q3B7I2 92 aa10.79□□□□□ -0.68
TUBE1-208ENST00000604743 LINC00299Q6ZSB3 139 aa10.79□□□□□ -0.68
TUBE1-208ENST00000604743 NOXA1Q86UR1 476 aa10.79□□□□□ -0.68
TUBE1-208ENST00000604743 RNASEH2CQ8TDP1 164 aaKnown RBP10.79□□□□□ -0.68
TUBE1-208ENST00000604743 OR10C1Q96KK4 312 aa10.79□□□□□ -0.68
TUBE1-208ENST00000604743 RNF2Q99496 336 aa10.79□□□□□ -0.68
TUBE1-208ENST00000604743 SPAG8Q99932 426 aaPredicted RBP10.79□□□□□ -0.68
TUBE1-208ENST00000604743 C7orf50Q9BRJ6 194 aaKnown RBP10.79□□□□□ -0.68
TUBE1-208ENST00000604743 GINS3Q9BRX5 216 aa10.79□□□□□ -0.68
TUBE1-208ENST00000604743 PAIP2BQ9ULR5 123 aaKnown RBP10.79□□□□□ -0.68
TUBE1-208ENST00000604743 TMED3Q9Y3Q3 217 aa10.79□□□□□ -0.68
TUBE1-208ENST00000604743 U3KQ87 197 aa10.79□□□□□ -0.68
TUBE1-208ENST00000604743 TENM3Q9P273 2699 aa10.79□□□□□ -0.68
TUBE1-208ENST00000604743 RBMY1BA6NDE4 496 aaKnown RBP10.78□□□□□ -0.68
TUBE1-208ENST00000604743 RBMY1EA6NEQ0 496 aaKnown RBP10.78□□□□□ -0.68
TUBE1-208ENST00000604743 TSPAN4O14817 238 aa10.78□□□□□ -0.68
TUBE1-208ENST00000604743 IFNA4P05014 189 aa10.78□□□□□ -0.68
TUBE1-208ENST00000604743 OR4E1P0C645 316 aa10.78□□□□□ -0.68
TUBE1-208ENST00000604743 RBMY1DP0C7P1 496 aaKnown RBP10.78□□□□□ -0.68
TUBE1-208ENST00000604743 TFPI2P48307 235 aa10.78□□□□□ -0.68
TUBE1-208ENST00000604743 UBE2MP61081 183 aaKnown RBP10.78□□□□□ -0.68
TUBE1-208ENST00000604743 C4orf46Q504U0 113 aa10.78□□□□□ -0.68
TUBE1-208ENST00000604743 GGNBP1Q5YKI7 109 aa10.78□□□□□ -0.68
TUBE1-208ENST00000604743 ETFRF1Q6IPR1 90 aa10.78□□□□□ -0.68
TUBE1-208ENST00000604743 PRSS54Q6PEW0 395 aa10.78□□□□□ -0.68
TUBE1-208ENST00000604743 ACY3Q96HD9 319 aa10.78□□□□□ -0.68
TUBE1-208ENST00000604743 TM2D3Q9BRN9 247 aa10.78□□□□□ -0.68
TUBE1-208ENST00000604743 MAGT1Q9H0U3 335 aa10.78□□□□□ -0.68
TUBE1-208ENST00000604743 ZFAND3Q9H8U3 227 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms