RNA–Protein interactions for RNA: ENST00000603232.6

CELF4-223, Transcript of CUGBP Elav-like family member 4, human

APPRIS ALT1 TSL 1 (best) BASIC

Gene CELF4, Length 1,906 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CELF4-223	ENST00000603232	LOX	P28300	417 aa	Predicted RBP	12.52	□□□□□ -0.41
CELF4-223	ENST00000603232	RPEL1	Q2QD12	228 aa		12.52	□□□□□ -0.41
CELF4-223	ENST00000603232	HLA-DRB5	Q30154	266 aa		12.52	□□□□□ -0.41
CELF4-223	ENST00000603232	OR1L8	Q8NGR8	309 aa		12.52	□□□□□ -0.41
CELF4-223	ENST00000603232	OR5B3	Q8NH48	314 aa		12.52	□□□□□ -0.41
CELF4-223	ENST00000603232	ITLN1	Q8WWA0	313 aa		12.52	□□□□□ -0.41
CELF4-223	ENST00000603232	NABP2	Q9BQ15	211 aa		12.52	□□□□□ -0.41
CELF4-223	ENST00000603232	TMEM208	Q9BTX3	173 aa		12.52	□□□□□ -0.41
CELF4-223	ENST00000603232	MRPL18	Q9H0U6	180 aa	Known RBP	12.52	□□□□□ -0.41
CELF4-223	ENST00000603232	PLEKHA3	Q9HB20	300 aa		12.52	□□□□□ -0.41
CELF4-223	ENST00000603232	PPP1R14D	Q9NXH3	145 aa		12.52	□□□□□ -0.41
CELF4-223	ENST00000603232	BET1L	Q9NYM9	111 aa		12.52	□□□□□ -0.41
CELF4-223	ENST00000603232	RNF7	Q9UBF6	113 aa		12.52	□□□□□ -0.41
CELF4-223	ENST00000603232		J3QR06	171 aa		12.51	□□□□□ -0.41
CELF4-223	ENST00000603232	DLEU1	O43261	78 aa		12.51	□□□□□ -0.41
CELF4-223	ENST00000603232	FOXH1	O75593	365 aa		12.51	□□□□□ -0.41
CELF4-223	ENST00000603232	IRF2	P14316	349 aa		12.51	□□□□□ -0.41
CELF4-223	ENST00000603232	SPRN	Q5BIV9	151 aa		12.51	□□□□□ -0.41
CELF4-223	ENST00000603232	SLC25A48	Q6ZT89	311 aa	Known RBP	12.51	□□□□□ -0.41
CELF4-223	ENST00000603232	MMD2	Q8IY49	270 aa		12.51	□□□□□ -0.41
CELF4-223	ENST00000603232		A0A1W2PPR1	153 aa		12.5	□□□□□ -0.41
CELF4-223	ENST00000603232		A0A1W2PRE2	83 aa		12.5	□□□□□ -0.41
CELF4-223	ENST00000603232	HELT	A6NFD8	242 aa		12.5	□□□□□ -0.41
CELF4-223	ENST00000603232	SERF1A	O75920	110 aa		12.5	□□□□□ -0.41
CELF4-223	ENST00000603232	CRISP2	P16562	243 aa		12.5	□□□□□ -0.41
CELF4-223	ENST00000603232	CBLN1	P23435	193 aa		12.5	□□□□□ -0.41
CELF4-223	ENST00000603232	TAS2R45	P59539	299 aa		12.5	□□□□□ -0.41
CELF4-223	ENST00000603232	UTF1	Q5T230	341 aa		12.5	□□□□□ -0.41
CELF4-223	ENST00000603232	WDR73	Q6P4I2	378 aa		12.5	□□□□□ -0.41
CELF4-223	ENST00000603232	ZNF788	Q6ZQV5	615 aa		12.5	□□□□□ -0.41
CELF4-223	ENST00000603232	MIR17HG	Q75NE6	70 aa		12.5	□□□□□ -0.41
CELF4-223	ENST00000603232	LYG1	Q8N1E2	194 aa		12.5	□□□□□ -0.41
CELF4-223	ENST00000603232		Q8N976	141 aa		12.5	□□□□□ -0.41
CELF4-223	ENST00000603232	SPOCK3	Q9BQ16	436 aa		12.5	□□□□□ -0.41
CELF4-223	ENST00000603232	RPUSD1	Q9UJJ7	312 aa	Known RBP	12.5	□□□□□ -0.41
CELF4-223	ENST00000603232	AKAP6	Q13023	2319 aa		12.5	□□□□□ -0.41
CELF4-223	ENST00000603232	TACC2	O95359	2948 aa		12.5	□□□□□ -0.41
CELF4-223	ENST00000603232	RPLP1	P05386	114 aa	Known RBP	12.5	□□□□□ -0.41
CELF4-223	ENST00000603232	COX6B1	P14854	86 aa		12.5	□□□□□ -0.41
CELF4-223	ENST00000603232	TMEM108	Q6UXF1	575 aa		12.5	□□□□□ -0.41
CELF4-223	ENST00000603232	ZNF705A	Q6ZN79	300 aa	Predicted RBP	12.5	□□□□□ -0.41
CELF4-223	ENST00000603232	RAI1	Q7Z5J4	1906 aa	Predicted RBP	12.5	□□□□□ -0.41
CELF4-223	ENST00000603232	GAFA1	Q96PS6	74 aa		12.5	□□□□□ -0.41
CELF4-223	ENST00000603232	RNF2	Q99496	336 aa		12.5	□□□□□ -0.41
CELF4-223	ENST00000603232	MRPL32	Q9BYC8	188 aa	Known RBP	12.5	□□□□□ -0.41
CELF4-223	ENST00000603232	FBN2	P35556	2912 aa		12.5	□□□□□ -0.41
CELF4-223	ENST00000603232	ISLR	O14498	428 aa		12.49	□□□□□ -0.41
CELF4-223	ENST00000603232	IGHV3-7	P01780	117 aa		12.49	□□□□□ -0.41
CELF4-223	ENST00000603232	FRMD6-AS1	P0C7T7	363 aa		12.49	□□□□□ -0.41
CELF4-223	ENST00000603232	CT45A6	P0DMU7	189 aa		12.49	□□□□□ -0.41
CELF4-223	ENST00000603232	CT45A5	P0DMU8	189 aa		12.49	□□□□□ -0.41
CELF4-223	ENST00000603232	CT45A7	P0DMV0	189 aa		12.49	□□□□□ -0.41
CELF4-223	ENST00000603232	CDKN1A	P38936	164 aa		12.49	□□□□□ -0.41
CELF4-223	ENST00000603232	GNG4	P50150	75 aa		12.49	□□□□□ -0.41
CELF4-223	ENST00000603232	CX3CL1	P78423	397 aa		12.49	□□□□□ -0.41
CELF4-223	ENST00000603232	PSG5	Q15238	335 aa		12.49	□□□□□ -0.41
CELF4-223	ENST00000603232	TEX36	Q5VZQ5	186 aa		12.49	□□□□□ -0.41
CELF4-223	ENST00000603232	OR1L6	Q8NGR2	347 aa		12.49	□□□□□ -0.41
CELF4-223	ENST00000603232	CACNG8	Q8WXS5	425 aa		12.49	□□□□□ -0.41
CELF4-223	ENST00000603232	ZNF503	Q96F45	646 aa		12.49	□□□□□ -0.41
CELF4-223	ENST00000603232	HSPB9	Q9BQS6	159 aa		12.49	□□□□□ -0.41
CELF4-223	ENST00000603232	GCM1	Q9NP62	436 aa		12.49	□□□□□ -0.41
CELF4-223	ENST00000603232	NGB	Q9NPG2	151 aa		12.49	□□□□□ -0.41
CELF4-223	ENST00000603232		A6NNC1	897 aa		12.49	□□□□□ -0.41
CELF4-223	ENST00000603232	SHISA9	B4DS77	424 aa		12.49	□□□□□ -0.41
CELF4-223	ENST00000603232	SLC17A3	O00476	420 aa		12.49	□□□□□ -0.41
CELF4-223	ENST00000603232	SPRY3	O43610	288 aa		12.49	□□□□□ -0.41
CELF4-223	ENST00000603232	BRS3	P32247	399 aa		12.49	□□□□□ -0.41
CELF4-223	ENST00000603232	CENPW	Q5EE01	88 aa		12.49	□□□□□ -0.41
CELF4-223	ENST00000603232	TOMM20L	Q6UXN7	152 aa		12.49	□□□□□ -0.41
CELF4-223	ENST00000603232	OSR1	Q8TAX0	266 aa	Predicted RBP	12.49	□□□□□ -0.41
CELF4-223	ENST00000603232	LEAP2	Q969E1	77 aa		12.49	□□□□□ -0.41
CELF4-223	ENST00000603232	SLC35D1	Q9NTN3	355 aa		12.49	□□□□□ -0.41
CELF4-223	ENST00000603232	IGKV1OR2-108	A0A075B7D4	117 aa		12.48	□□□□□ -0.41
CELF4-223	ENST00000603232	TEX50	A0A1B0GTY4	177 aa		12.48	□□□□□ -0.41
CELF4-223	ENST00000603232		F2Z2F3	143 aa		12.48	□□□□□ -0.41
CELF4-223	ENST00000603232	CD3E	P07766	207 aa		12.48	□□□□□ -0.41
CELF4-223	ENST00000603232	SELENOV	P59797	346 aa		12.48	□□□□□ -0.41
CELF4-223	ENST00000603232	REL	Q04864	619 aa	Predicted RBP	12.48	□□□□□ -0.41
CELF4-223	ENST00000603232	CD69	Q07108	199 aa		12.48	□□□□□ -0.41
CELF4-223	ENST00000603232	VHLL	Q6RSH7	139 aa		12.48	□□□□□ -0.41
CELF4-223	ENST00000603232	ZNF833P	Q6ZTB9	187 aa		12.48	□□□□□ -0.41
CELF4-223	ENST00000603232	DCAF16	Q9NXF7	216 aa		12.48	□□□□□ -0.41
CELF4-223	ENST00000603232	RNF114	Q9Y508	228 aa		12.48	□□□□□ -0.41
CELF4-223	ENST00000603232	FCN1	O00602	326 aa		12.47	□□□□□ -0.41
CELF4-223	ENST00000603232	RNASE2	P10153	161 aa	Known RBP	12.47	□□□□□ -0.41
CELF4-223	ENST00000603232	TIGIT	Q495A1	244 aa		12.47	□□□□□ -0.41
CELF4-223	ENST00000603232	OR10J3	Q5JRS4	329 aa		12.47	□□□□□ -0.41
CELF4-223	ENST00000603232	SLC25A33	Q9BSK2	321 aa		12.47	□□□□□ -0.41
CELF4-223	ENST00000603232	GOLT1B	Q9Y3E0	138 aa		12.47	□□□□□ -0.41
CELF4-223	ENST00000603232	ABCA12	Q86UK0	2595 aa		12.47	□□□□□ -0.41
CELF4-223	ENST00000603232	PSMB11	A5LHX3	300 aa		12.47	□□□□□ -0.41
CELF4-223	ENST00000603232	SNURFL	B1AK76	121 aa		12.47	□□□□□ -0.41
CELF4-223	ENST00000603232	IGHV1-46	P01743	117 aa		12.47	□□□□□ -0.41
CELF4-223	ENST00000603232	C8orf88	P0DMB2	117 aa		12.47	□□□□□ -0.41
CELF4-223	ENST00000603232	HNF1A	P20823	631 aa		12.47	□□□□□ -0.41
CELF4-223	ENST00000603232	CRYBB3	P26998	211 aa		12.47	□□□□□ -0.41
CELF4-223	ENST00000603232	PPOX	P50336	477 aa		12.47	□□□□□ -0.41
CELF4-223	ENST00000603232	TNFAIP6	P98066	277 aa	Predicted RBP	12.47	□□□□□ -0.41
CELF4-223	ENST00000603232	SSX8	Q7RTT4	187 aa		12.47	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms