RNA–Protein interactions for RNA: ENST00000603043.1

CDCA3-211, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 1,995 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-211ENST00000603043 THAP6Q8TBB0 222 aa12.09□□□□□ -0.47
CDCA3-211ENST00000603043 PLEKHA3Q9HB20 300 aa12.09□□□□□ -0.47
CDCA3-211ENST00000603043 TRBV9A0A0B4J1U6 114 aa12.08□□□□□ -0.48
CDCA3-211ENST00000603043 H2BFSP57053 126 aa12.08□□□□□ -0.48
CDCA3-211ENST00000603043 RHOGP84095 191 aa12.08□□□□□ -0.48
CDCA3-211ENST00000603043 OR2F1Q13607 317 aa12.08□□□□□ -0.48
CDCA3-211ENST00000603043 DEFB136Q30KP8 78 aa12.08□□□□□ -0.48
CDCA3-211ENST00000603043 AARDQ4LEZ3 155 aa12.08□□□□□ -0.48
CDCA3-211ENST00000603043 SPINK9Q5DT21 86 aa12.08□□□□□ -0.48
CDCA3-211ENST00000603043 TMEM88Q6PEY1 159 aa12.08□□□□□ -0.48
CDCA3-211ENST00000603043 KCNRGQ8N5I3 272 aa12.08□□□□□ -0.48
CDCA3-211ENST00000603043 OR52B4Q8NGK2 314 aa12.08□□□□□ -0.48
CDCA3-211ENST00000603043 NIT2Q9NQR4 276 aa12.08□□□□□ -0.48
CDCA3-211ENST00000603043 C13orf42A0A1B0GVH6 325 aa12.07□□□□□ -0.48
CDCA3-211ENST00000603043 GOSR2O14653 212 aa12.07□□□□□ -0.48
CDCA3-211ENST00000603043 IGHV3-11P01762 117 aa12.07□□□□□ -0.48
CDCA3-211ENST00000603043 PF4P02776 101 aa12.07□□□□□ -0.48
CDCA3-211ENST00000603043 SMCO1Q147U7 214 aa12.07□□□□□ -0.48
CDCA3-211ENST00000603043 FAM74A1Q5RGS3 127 aa12.07□□□□□ -0.48
CDCA3-211ENST00000603043 CBLN2Q8IUK8 224 aa12.07□□□□□ -0.48
CDCA3-211ENST00000603043 NECAP1Q8NC96 275 aa12.07□□□□□ -0.48
CDCA3-211ENST00000603043 USMG5Q96IX5 58 aa12.07□□□□□ -0.48
CDCA3-211ENST00000603043 TMED3Q9Y3Q3 217 aa12.07□□□□□ -0.48
CDCA3-211ENST00000603043 FAM223BA6NKX1 122 aa12.07□□□□□ -0.48
CDCA3-211ENST00000603043 BCL2L11O43521 198 aa12.07□□□□□ -0.48
CDCA3-211ENST00000603043 HOXB5P09067 269 aa12.07□□□□□ -0.48
CDCA3-211ENST00000603043 TREML4Q6UXN2 200 aa12.07□□□□□ -0.48
CDCA3-211ENST00000603043 SLC16A13Q7RTY0 426 aa12.07□□□□□ -0.48
CDCA3-211ENST00000603043 FAM223AQ8IWN6 122 aa12.07□□□□□ -0.48
CDCA3-211ENST00000603043 OR52E5Q8NH55 327 aa12.07□□□□□ -0.48
CDCA3-211ENST00000603043 RXFP4Q8TDU9 374 aa12.07□□□□□ -0.48
CDCA3-211ENST00000603043 WDR89Q96FK6 387 aaPredicted RBP12.07□□□□□ -0.48
CDCA3-211ENST00000603043 A0A1B0GU03 582 aa12.06□□□□□ -0.48
CDCA3-211ENST00000603043 C5orf52A6NGY3 159 aa12.06□□□□□ -0.48
CDCA3-211ENST00000603043 OR2J3O76001 311 aa12.06□□□□□ -0.48
CDCA3-211ENST00000603043 LGALS1P09382 135 aaKnown RBP12.06□□□□□ -0.48
CDCA3-211ENST00000603043 SPCS3P61009 180 aa12.06□□□□□ -0.48
CDCA3-211ENST00000603043 RUNX1Q01196 453 aa12.06□□□□□ -0.48
CDCA3-211ENST00000603043 OR2C3Q8N628 320 aa12.06□□□□□ -0.48
CDCA3-211ENST00000603043 MITD1Q8WV92 249 aa12.06□□□□□ -0.48
CDCA3-211ENST00000603043 RAX2Q96IS3 184 aa12.06□□□□□ -0.48
CDCA3-211ENST00000603043 FANCD2OSQ96PS1 177 aa12.06□□□□□ -0.48
CDCA3-211ENST00000603043 DUX3Q96PT4 197 aa12.06□□□□□ -0.48
CDCA3-211ENST00000603043 SEC11CQ9BY50 192 aa12.06□□□□□ -0.48
CDCA3-211ENST00000603043 CACFD1Q9UGQ2 172 aa12.06□□□□□ -0.48
CDCA3-211ENST00000603043 MGAM2Q2M2H8 2515 aa12.06□□□□□ -0.48
CDCA3-211ENST00000603043 IGLV11-55A0A075B6I3 123 aa12.05□□□□□ -0.48
CDCA3-211ENST00000603043 CCL24O00175 119 aa12.05□□□□□ -0.48
CDCA3-211ENST00000603043 CYB5BO43169 146 aa12.05□□□□□ -0.48
CDCA3-211ENST00000603043 NXPH3O95157 252 aa12.05□□□□□ -0.48
CDCA3-211ENST00000603043 HIST1H1BP16401 226 aaKnown RBP12.05□□□□□ -0.48
CDCA3-211ENST00000603043 BTF3P20290 206 aaKnown RBP12.05□□□□□ -0.48
CDCA3-211ENST00000603043 BLOC1S1P78537 153 aa12.05□□□□□ -0.48
CDCA3-211ENST00000603043 ERHP84090 104 aaKnown RBP12.05□□□□□ -0.48
CDCA3-211ENST00000603043 KLK9Q2XQG4 91 aa12.05□□□□□ -0.48
CDCA3-211ENST00000603043 C15orf32Q32M92 178 aa12.05□□□□□ -0.48
CDCA3-211ENST00000603043 GGNBP1Q5YKI7 109 aa12.05□□□□□ -0.48
CDCA3-211ENST00000603043 ETV3LQ6ZN32 361 aa12.05□□□□□ -0.48
CDCA3-211ENST00000603043 OR11H1Q8NG94 326 aa12.05□□□□□ -0.48
CDCA3-211ENST00000603043 C2CD4CQ8TF44 421 aa12.05□□□□□ -0.48
CDCA3-211ENST00000603043 ENY2Q9NPA8 101 aa12.05□□□□□ -0.48
CDCA3-211ENST00000603043 FBXL7Q9UJT9 491 aa12.05□□□□□ -0.48
CDCA3-211ENST00000603043 KLK9Q9UKQ9 250 aa12.05□□□□□ -0.48
CDCA3-211ENST00000603043 F11RQ9Y624 299 aaKnown RBP12.05□□□□□ -0.48
CDCA3-211ENST00000603043 C1orf196B1AJZ1 125 aa12.05□□□□□ -0.48
CDCA3-211ENST00000603043 ADAP1O75689 374 aa12.05□□□□□ -0.48
CDCA3-211ENST00000603043 SLC25A6P12236 298 aa12.05□□□□□ -0.48
CDCA3-211ENST00000603043 MYCNOSP40205 109 aa12.05□□□□□ -0.48
CDCA3-211ENST00000603043 ATP5G2Q06055 141 aa12.05□□□□□ -0.48
CDCA3-211ENST00000603043 PDLIM3Q53GG5 364 aaPredicted RBP12.05□□□□□ -0.48
CDCA3-211ENST00000603043 ZNF546Q86UE3 836 aa12.05□□□□□ -0.48
CDCA3-211ENST00000603043 THYN1Q9P016 225 aa12.05□□□□□ -0.48
CDCA3-211ENST00000603043 DMRT1Q9Y5R6 373 aa12.05□□□□□ -0.48
CDCA3-211ENST00000603043 INS-IGF2F8WCM5 200 aa12.04□□□□□ -0.48
CDCA3-211ENST00000603043 SLC25A4P12235 298 aa12.04□□□□□ -0.48
CDCA3-211ENST00000603043 SNRPEP62304 92 aaKnown RBP12.04□□□□□ -0.48
CDCA3-211ENST00000603043 PEA15Q15121 130 aa12.04□□□□□ -0.48
CDCA3-211ENST00000603043 OR1P1Q8NH06 330 aa12.04□□□□□ -0.48
CDCA3-211ENST00000603043 P2RX4Q99571 388 aa12.04□□□□□ -0.48
CDCA3-211ENST00000603043 NDUFB8O95169 186 aa12.03□□□□□ -0.48
CDCA3-211ENST00000603043 IFNA21P01568 189 aa12.03□□□□□ -0.48
CDCA3-211ENST00000603043 ADCYAP1P18509 176 aa12.03□□□□□ -0.48
CDCA3-211ENST00000603043 SLC25A24Q6NUK1 477 aa12.03□□□□□ -0.48
CDCA3-211ENST00000603043 STX12Q86Y82 276 aa12.03□□□□□ -0.48
CDCA3-211ENST00000603043 C15orf54Q8N8G6 183 aa12.03□□□□□ -0.48
CDCA3-211ENST00000603043 ZNF114Q8NC26 417 aa12.03□□□□□ -0.48
CDCA3-211ENST00000603043 OR1S2Q8NGQ3 325 aa12.03□□□□□ -0.48
CDCA3-211ENST00000603043 OR1L6Q8NGR2 347 aa12.03□□□□□ -0.48
CDCA3-211ENST00000603043 OR1N2Q8NGR9 330 aa12.03□□□□□ -0.48
CDCA3-211ENST00000603043 TRAV14DV4A0A0A6YYC5 116 aa12.03□□□□□ -0.48
CDCA3-211ENST00000603043 CEBPZOSA8MTT3 80 aa12.03□□□□□ -0.48
CDCA3-211ENST00000603043 PITX3O75364 302 aa12.03□□□□□ -0.48
CDCA3-211ENST00000603043 SNCAP37840 140 aa12.03□□□□□ -0.48
CDCA3-211ENST00000603043 MFAP2P55001 183 aa12.03□□□□□ -0.48
CDCA3-211ENST00000603043 TNFRSF9Q07011 255 aa12.03□□□□□ -0.48
CDCA3-211ENST00000603043 ZNF616Q08AN1 781 aa12.03□□□□□ -0.48
CDCA3-211ENST00000603043 FHL3Q13643 280 aa12.03□□□□□ -0.48
CDCA3-211ENST00000603043 ZNF343Q6P1L6 599 aa12.03□□□□□ -0.48
CDCA3-211ENST00000603043 HSPB7Q9UBY9 170 aa12.03□□□□□ -0.48
CDCA3-211ENST00000603043 NOTCH3Q9UM47 2321 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms