RNA–Protein interactions for RNA: ENST00000602086.5

ZNF548-212, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-212ENST00000602086 IGHV4-59P01825 116 aa11.32□□□□□ -0.6
ZNF548-212ENST00000602086 DEFA4P12838 97 aa11.32□□□□□ -0.6
ZNF548-212ENST00000602086 RPL29P47914 159 aaKnown RBP11.32□□□□□ -0.6
ZNF548-212ENST00000602086 CAMLGP49069 296 aa11.32□□□□□ -0.6
ZNF548-212ENST00000602086 LY6EQ16553 131 aa11.32□□□□□ -0.6
ZNF548-212ENST00000602086 TMEM182Q6ZP80 229 aaPredicted RBP11.32□□□□□ -0.6
ZNF548-212ENST00000602086 LFNGQ8NES3 379 aa11.32□□□□□ -0.6
ZNF548-212ENST00000602086 FANCD2OSQ96PS1 177 aa11.32□□□□□ -0.6
ZNF548-212ENST00000602086 MGST2Q99735 147 aa11.32□□□□□ -0.6
ZNF548-212ENST00000602086 FAM103A1Q9BTL3 118 aaKnown RBP11.32□□□□□ -0.6
ZNF548-212ENST00000602086 GGTLC1Q9BX51 225 aa11.32□□□□□ -0.6
ZNF548-212ENST00000602086 NIPBLQ6KC79 2804 aaeCLIP11.32□□□□□ -0.6
ZNF548-212ENST00000602086 AGPAT2O15120 278 aa11.31□□□□□ -0.6
ZNF548-212ENST00000602086 TMEM41BQ5BJD5 291 aa11.31□□□□□ -0.6
ZNF548-212ENST00000602086 UNQ5815/PRO19632Q6UWF5 114 aa11.31□□□□□ -0.6
ZNF548-212ENST00000602086 MISP3Q96FF7 219 aa11.31□□□□□ -0.6
ZNF548-212ENST00000602086 YAE1D1Q9NRH1 226 aa11.31□□□□□ -0.6
ZNF548-212ENST00000602086 INAFM1C9JVW0 142 aa11.3□□□□□ -0.6
ZNF548-212ENST00000602086 H3BUA1 57 aa11.3□□□□□ -0.6
ZNF548-212ENST00000602086 K7EIM0 57 aa11.3□□□□□ -0.6
ZNF548-212ENST00000602086 MT-CO2P00403 227 aa11.3□□□□□ -0.6
ZNF548-212ENST00000602086 PRH1P02810 166 aa11.3□□□□□ -0.6
ZNF548-212ENST00000602086 APELAP0DMC3 54 aa11.3□□□□□ -0.6
ZNF548-212ENST00000602086 FCGR2BP31994 310 aaPredicted RBP11.3□□□□□ -0.6
ZNF548-212ENST00000602086 SRP14P37108 136 aaKnown RBP11.3□□□□□ -0.6
ZNF548-212ENST00000602086 SELENOTP62341 195 aa11.3□□□□□ -0.6
ZNF548-212ENST00000602086 PRR20EP86478 221 aa11.3□□□□□ -0.6
ZNF548-212ENST00000602086 PRR20CP86479 221 aa11.3□□□□□ -0.6
ZNF548-212ENST00000602086 PRR20DP86480 221 aa11.3□□□□□ -0.6
ZNF548-212ENST00000602086 PRR20BP86481 221 aa11.3□□□□□ -0.6
ZNF548-212ENST00000602086 PRR20AP86496 221 aa11.3□□□□□ -0.6
ZNF548-212ENST00000602086 ACOT6Q3I5F7 207 aaPredicted RBP11.3□□□□□ -0.6
ZNF548-212ENST00000602086 PXDC1Q5TGL8 231 aa11.3□□□□□ -0.6
ZNF548-212ENST00000602086 Q6ZRG5 221 aa11.3□□□□□ -0.6
ZNF548-212ENST00000602086 SLC35E3Q7Z769 313 aa11.3□□□□□ -0.6
ZNF548-212ENST00000602086 COMMD1Q8N668 190 aa11.3□□□□□ -0.6
ZNF548-212ENST00000602086 OR4X1Q8NH49 305 aa11.3□□□□□ -0.6
ZNF548-212ENST00000602086 PFDN2Q9UHV9 154 aa11.3□□□□□ -0.6
ZNF548-212ENST00000602086 SLC45A2Q9UMX9 530 aa11.3□□□□□ -0.6
ZNF548-212ENST00000602086 IGKV1OR2-108A0A075B7D4 117 aa11.29□□□□□ -0.6
ZNF548-212ENST00000602086 TRBV9A0A0B4J1U6 114 aa11.29□□□□□ -0.6
ZNF548-212ENST00000602086 TRAV1-1A0A0B4J248 108 aa11.29□□□□□ -0.6
ZNF548-212ENST00000602086 TRAV41A0A0B4J266 112 aa11.29□□□□□ -0.6
ZNF548-212ENST00000602086 AP4M1O00189 453 aa11.29□□□□□ -0.6
ZNF548-212ENST00000602086 TSPAN15O95858 294 aa11.29□□□□□ -0.6
ZNF548-212ENST00000602086 M6PRP20645 277 aa11.29□□□□□ -0.6
ZNF548-212ENST00000602086 MLANAQ16655 118 aa11.29□□□□□ -0.6
ZNF548-212ENST00000602086 FFAR4Q5NUL3 377 aa11.29□□□□□ -0.6
ZNF548-212ENST00000602086 EIF4E3Q8N5X7 224 aaKnown RBP11.29□□□□□ -0.6
ZNF548-212ENST00000602086 OR2T6Q8NHC8 308 aa11.29□□□□□ -0.6
ZNF548-212ENST00000602086 VN1R17PQ8TDU5 208 aa11.29□□□□□ -0.6
ZNF548-212ENST00000602086 MBD3L1Q8WWY6 194 aa11.29□□□□□ -0.6
ZNF548-212ENST00000602086 ATP6V0BQ99437 205 aa11.29□□□□□ -0.6
ZNF548-212ENST00000602086 TRGV9Q99603 122 aa11.29□□□□□ -0.6
ZNF548-212ENST00000602086 TXN2Q99757 166 aa11.29□□□□□ -0.6
ZNF548-212ENST00000602086 C19orf24Q9BVV8 132 aa11.29□□□□□ -0.6
ZNF548-212ENST00000602086 RPRMQ9NS64 109 aa11.29□□□□□ -0.6
ZNF548-212ENST00000602086 RFNGQ9Y644 331 aa11.29□□□□□ -0.6
ZNF548-212ENST00000602086 PXMP4Q9Y6I8 212 aa11.29□□□□□ -0.6
ZNF548-212ENST00000602086 TCRBV4S1A1TA0A5B7 111 aa11.28□□□□□ -0.6
ZNF548-212ENST00000602086 HBE1P02100 147 aa11.28□□□□□ -0.6
ZNF548-212ENST00000602086 RND2P52198 227 aa11.28□□□□□ -0.6
ZNF548-212ENST00000602086 ACSM6Q6P461 480 aa11.28□□□□□ -0.6
ZNF548-212ENST00000602086 IL34Q6ZMJ4 242 aa11.28□□□□□ -0.6
ZNF548-212ENST00000602086 PCNPQ8WW12 178 aaKnown RBP11.28□□□□□ -0.6
ZNF548-212ENST00000602086 NPIPB3Q92617 1050 aa11.28□□□□□ -0.6
ZNF548-212ENST00000602086 ACY3Q96HD9 319 aa11.28□□□□□ -0.6
ZNF548-212ENST00000602086 CXorf58Q96LI9 332 aa11.28□□□□□ -0.6
ZNF548-212ENST00000602086 NSD1Q96L73 2696 aaPredicted RBP11.27□□□□□ -0.6
ZNF548-212ENST00000602086 IGKV1D-37A0A075B6S9 117 aa11.27□□□□□ -0.61
ZNF548-212ENST00000602086 TRAV30A0A087WSZ9 112 aa11.27□□□□□ -0.61
ZNF548-212ENST00000602086 RAB19A4D1S5 217 aa11.27□□□□□ -0.61
ZNF548-212ENST00000602086 LINC01548A6NM66 108 aa11.27□□□□□ -0.61
ZNF548-212ENST00000602086 SEC14L6B5MCN3 397 aa11.27□□□□□ -0.61
ZNF548-212ENST00000602086 TEX46H3BTG2 121 aa11.27□□□□□ -0.61
ZNF548-212ENST00000602086 HOXA3O43365 443 aaPredicted RBP11.27□□□□□ -0.61
ZNF548-212ENST00000602086 CLN5O75503 358 aa11.27□□□□□ -0.61
ZNF548-212ENST00000602086 LINC00869P0C866 280 aa11.27□□□□□ -0.61
ZNF548-212ENST00000602086 OR10J1P30954 320 aa11.27□□□□□ -0.61
ZNF548-212ENST00000602086 NPBWR1P48145 328 aa11.27□□□□□ -0.61
ZNF548-212ENST00000602086 B2MP61769 119 aa11.27□□□□□ -0.61
ZNF548-212ENST00000602086 ECSCRQ19T08 205 aa11.27□□□□□ -0.61
ZNF548-212ENST00000602086 C19orf35Q6ZS72 473 aa11.27□□□□□ -0.61
ZNF548-212ENST00000602086 CYP2G1PQ6ZSU1 146 aa11.27□□□□□ -0.61
ZNF548-212ENST00000602086 STPG3Q8N7X2 389 aa11.27□□□□□ -0.61
ZNF548-212ENST00000602086 SIGLECL1Q8N7X8 197 aa11.27□□□□□ -0.61
ZNF548-212ENST00000602086 NECAP1Q8NC96 275 aa11.27□□□□□ -0.61
ZNF548-212ENST00000602086 OR5T1Q8NG75 326 aa11.27□□□□□ -0.61
ZNF548-212ENST00000602086 FAM213BQ8TBF2 198 aa11.27□□□□□ -0.61
ZNF548-212ENST00000602086 NPFFR1Q9GZQ6 430 aa11.27□□□□□ -0.61
ZNF548-212ENST00000602086 SLC39A9Q9NUM3 307 aa11.27□□□□□ -0.61
ZNF548-212ENST00000602086 MRPL36Q9P0J6 103 aaKnown RBP11.27□□□□□ -0.61
ZNF548-212ENST00000602086 CTXND1A0A1B0GTU2 59 aa11.26□□□□□ -0.61
ZNF548-212ENST00000602086 TMEM89A2RUT3 159 aa11.26□□□□□ -0.61
ZNF548-212ENST00000602086 CLDN34H7C241 214 aa11.26□□□□□ -0.61
ZNF548-212ENST00000602086 YIF1AO95070 293 aa11.26□□□□□ -0.61
ZNF548-212ENST00000602086 FABP1P07148 127 aa11.26□□□□□ -0.61
ZNF548-212ENST00000602086 H2AFB1P0C5Y9 115 aa11.26□□□□□ -0.61
ZNF548-212ENST00000602086 PPIFP30405 207 aaKnown RBP11.26□□□□□ -0.61
ZNF548-212ENST00000602086 FHITP49789 147 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms