RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 TMED4Q7Z7H5 227 aa13.1□□□□□ -0.31
IRF3-230ENST00000601809 WFDC10AQ9H1F0 79 aa13.1□□□□□ -0.31
IRF3-230ENST00000601809 ZFAND3Q9H8U3 227 aa13.1□□□□□ -0.31
IRF3-230ENST00000601809 NAP1L6A6NFF2 107 aa13.09□□□□□ -0.31
IRF3-230ENST00000601809 NDUFB6O95139 128 aa13.09□□□□□ -0.31
IRF3-230ENST00000601809 SFT2D2O95562 160 aa13.09□□□□□ -0.31
IRF3-230ENST00000601809 ANXA3P12429 323 aa13.09□□□□□ -0.31
IRF3-230ENST00000601809 IL7P13232 177 aa13.09□□□□□ -0.31
IRF3-230ENST00000601809 SUB1P53999 127 aaKnown RBP eCLIP13.09□□□□□ -0.31
IRF3-230ENST00000601809 RELQ04864 619 aaPredicted RBP13.09□□□□□ -0.31
IRF3-230ENST00000601809 OR4X1Q8NH49 305 aa13.09□□□□□ -0.31
IRF3-230ENST00000601809 WWC2-AS2Q96NR7 200 aa13.09□□□□□ -0.31
IRF3-230ENST00000601809 A0A1B0GU03 582 aa13.08□□□□□ -0.32
IRF3-230ENST00000601809 GNG7O60262 68 aa13.08□□□□□ -0.32
IRF3-230ENST00000601809 NPBWR1P48145 328 aa13.08□□□□□ -0.32
IRF3-230ENST00000601809 GUCA2BQ16661 112 aa13.08□□□□□ -0.32
IRF3-230ENST00000601809 CENPSQ8N2Z9 138 aa13.08□□□□□ -0.32
IRF3-230ENST00000601809 DUSP18Q8NEJ0 188 aa13.08□□□□□ -0.32
IRF3-230ENST00000601809 ENY2Q9NPA8 101 aa13.08□□□□□ -0.32
IRF3-230ENST00000601809 CACFD1Q9UGQ2 172 aa13.08□□□□□ -0.32
IRF3-230ENST00000601809 SMPXQ9UHP9 88 aa13.08□□□□□ -0.32
IRF3-230ENST00000601809 IGHV7-4-1A0A0J9YVY3 117 aa13.07□□□□□ -0.32
IRF3-230ENST00000601809 A6NHS1 94 aa13.07□□□□□ -0.32
IRF3-230ENST00000601809 TSPAN4O14817 238 aa13.07□□□□□ -0.32
IRF3-230ENST00000601809 PLA2G10O15496 165 aa13.07□□□□□ -0.32
IRF3-230ENST00000601809 ZNF207O43670 478 aaKnown RBP13.07□□□□□ -0.32
IRF3-230ENST00000601809 CLN5O75503 358 aa13.07□□□□□ -0.32
IRF3-230ENST00000601809 SCAF4O95104 1147 aaKnown RBP13.07□□□□□ -0.32
IRF3-230ENST00000601809 NXPH3O95157 252 aa13.07□□□□□ -0.32
IRF3-230ENST00000601809 IGKV1-17P01599 117 aa13.07□□□□□ -0.32
IRF3-230ENST00000601809 SLC25A6P12236 298 aa13.07□□□□□ -0.32
IRF3-230ENST00000601809 UBE2MP61081 183 aaKnown RBP13.07□□□□□ -0.32
IRF3-230ENST00000601809 HAGHQ16775 308 aa13.07□□□□□ -0.32
IRF3-230ENST00000601809 TRIQKQ629K1 86 aa13.07□□□□□ -0.32
IRF3-230ENST00000601809 TOMM20LQ6UXN7 152 aa13.07□□□□□ -0.32
IRF3-230ENST00000601809 DEFB125Q8N687 156 aa13.07□□□□□ -0.32
IRF3-230ENST00000601809 SLC24A4Q8NFF2 622 aa13.07□□□□□ -0.32
IRF3-230ENST00000601809 RCHY1Q96PM5 261 aa13.07□□□□□ -0.32
IRF3-230ENST00000601809 C20orf24Q9BUV8 137 aa13.07□□□□□ -0.32
IRF3-230ENST00000601809 RBKSQ9H477 322 aa13.07□□□□□ -0.32
IRF3-230ENST00000601809 HEYLQ9NQ87 328 aaPredicted RBP13.07□□□□□ -0.32
IRF3-230ENST00000601809 FLVCR2Q9UPI3 526 aa13.07□□□□□ -0.32
IRF3-230ENST00000601809 NBEAL2Q6ZNJ1 2754 aa13.07□□□□□ -0.32
IRF3-230ENST00000601809 RBMY1BA6NDE4 496 aaKnown RBP13.06□□□□□ -0.32
IRF3-230ENST00000601809 RBMY1EA6NEQ0 496 aaKnown RBP13.06□□□□□ -0.32
IRF3-230ENST00000601809 CEBPZOSA8MTT3 80 aa13.06□□□□□ -0.32
IRF3-230ENST00000601809 CHEK1O14757 476 aa13.06□□□□□ -0.32
IRF3-230ENST00000601809 RBMY1DP0C7P1 496 aaKnown RBP13.06□□□□□ -0.32
IRF3-230ENST00000601809 OPRK1P41145 380 aa13.06□□□□□ -0.32
IRF3-230ENST00000601809 FAM90A2PQ658T7 463 aa13.06□□□□□ -0.32
IRF3-230ENST00000601809 ZNF600Q6ZNG1 722 aa13.06□□□□□ -0.32
IRF3-230ENST00000601809 TMEM116Q8NCL8 245 aa13.06□□□□□ -0.32
IRF3-230ENST00000601809 RNASEH2CQ8TDP1 164 aaKnown RBP13.06□□□□□ -0.32
IRF3-230ENST00000601809 CITED4Q96RK1 184 aa13.06□□□□□ -0.32
IRF3-230ENST00000601809 SPAG8Q99932 426 aaPredicted RBP13.06□□□□□ -0.32
IRF3-230ENST00000601809 C7orf50Q9BRJ6 194 aaKnown RBP13.06□□□□□ -0.32
IRF3-230ENST00000601809 CSMD3Q7Z407 3707 aa13.06□□□□□ -0.32
IRF3-230ENST00000601809 OR11H12B2RN74 326 aa13.05□□□□□ -0.32
IRF3-230ENST00000601809 VAMP1P23763 118 aa13.05□□□□□ -0.32
IRF3-230ENST00000601809 NPY1RP25929 384 aa13.05□□□□□ -0.32
IRF3-230ENST00000601809 PRSS54Q6PEW0 395 aa13.05□□□□□ -0.32
IRF3-230ENST00000601809 LINC00299Q6ZSB3 139 aa13.05□□□□□ -0.32
IRF3-230ENST00000601809 DTD1Q8TEA8 209 aa13.05□□□□□ -0.32
IRF3-230ENST00000601809 RNF2Q99496 336 aa13.05□□□□□ -0.32
IRF3-230ENST00000601809 VSIRQ9H7M9 311 aa13.05□□□□□ -0.32
IRF3-230ENST00000601809 PIGBOS1A0A0B4J2F0 54 aa13.04□□□□□ -0.32
IRF3-230ENST00000601809 C9orf170A2RU37 121 aa13.04□□□□□ -0.32
IRF3-230ENST00000601809 IGLC1P0CG04 106 aa13.04□□□□□ -0.32
IRF3-230ENST00000601809 LILRB2Q8N423 598 aa13.04□□□□□ -0.32
IRF3-230ENST00000601809 RHPN1-AS1Q9BWJ2 59 aa13.04□□□□□ -0.32
IRF3-230ENST00000601809 SRD5A3Q9H8P0 318 aa13.04□□□□□ -0.32
IRF3-230ENST00000601809 TMED3Q9Y3Q3 217 aa13.04□□□□□ -0.32
IRF3-230ENST00000601809 PUS1Q9Y606 427 aaKnown RBP eCLIP13.04□□□□□ -0.32
IRF3-230ENST00000601809 U3KQ87 197 aa13.04□□□□□ -0.32
IRF3-230ENST00000601809 STARD9Q9P2P6 4700 aa13.03□□□□□ -0.32
IRF3-230ENST00000601809 APOHP02749 345 aaPredicted RBP13.03□□□□□ -0.32
IRF3-230ENST00000601809 ODF3L2Q3SX64 289 aa13.03□□□□□ -0.32
IRF3-230ENST00000601809 RBPMS2Q6ZRY4 209 aaKnown RBP13.03□□□□□ -0.32
IRF3-230ENST00000601809 SLC16A13Q7RTY0 426 aa13.03□□□□□ -0.32
IRF3-230ENST00000601809 OR52B4Q8NGK2 314 aa13.03□□□□□ -0.32
IRF3-230ENST00000601809 HIPK2Q9H2X6 1198 aa13.03□□□□□ -0.32
IRF3-230ENST00000601809 TUBA4BQ9H853 241 aa13.03□□□□□ -0.32
IRF3-230ENST00000601809 IGHV3-49A0A0A0MS15 119 aa13.02□□□□□ -0.33
IRF3-230ENST00000601809 TRAV14DV4A0A0A6YYC5 116 aa13.02□□□□□ -0.33
IRF3-230ENST00000601809 LINC00854A0A1B0GVQ3 168 aa13.02□□□□□ -0.33
IRF3-230ENST00000601809 RPS10-NUDT3A0A1W2PQS6 291 aa13.02□□□□□ -0.33
IRF3-230ENST00000601809 FAM90A26D6RGX4 464 aa13.02□□□□□ -0.33
IRF3-230ENST00000601809 YIF1AO95070 293 aa13.02□□□□□ -0.33
IRF3-230ENST00000601809 SLC25A4P12235 298 aa13.02□□□□□ -0.33
IRF3-230ENST00000601809 INPP1P49441 399 aa13.02□□□□□ -0.33
IRF3-230ENST00000601809 DHRS2Q13268 280 aa13.02□□□□□ -0.33
IRF3-230ENST00000601809 CNPY1Q3B7I2 92 aa13.02□□□□□ -0.33
IRF3-230ENST00000601809 TIGITQ495A1 244 aa13.02□□□□□ -0.33
IRF3-230ENST00000601809 GGNBP1Q5YKI7 109 aa13.02□□□□□ -0.33
IRF3-230ENST00000601809 OR1S1Q8NH92 325 aa13.02□□□□□ -0.33
IRF3-230ENST00000601809 ZMAT4Q9H898 229 aa13.02□□□□□ -0.33
IRF3-230ENST00000601809 OR4E1P0C645 316 aa13.01□□□□□ -0.33
IRF3-230ENST00000601809 RND2P52198 227 aa13.01□□□□□ -0.33
IRF3-230ENST00000601809 LAMTOR1Q6IAA8 161 aa13.01□□□□□ -0.33
IRF3-230ENST00000601809 LYG2Q86SG7 212 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms