RNA–Protein interactions for RNA: ENST00000601609.1

PPFIA4-213, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-213ENST00000601609 SHPKQ9UHJ6 478 aa11.97□□□□□ -0.49
PPFIA4-213ENST00000601609 RPS10-NUDT3A0A1W2PQS6 291 aa11.96□□□□□ -0.49
PPFIA4-213ENST00000601609 NAP1L6A6NFF2 107 aa11.96□□□□□ -0.49
PPFIA4-213ENST00000601609 ZNF785A8K8V0 405 aa11.96□□□□□ -0.49
PPFIA4-213ENST00000601609 CENPXA8MT69 81 aa11.96□□□□□ -0.49
PPFIA4-213ENST00000601609 ZNF846Q147U1 533 aa11.96□□□□□ -0.49
PPFIA4-213ENST00000601609 SLC24A4Q8NFF2 622 aa11.96□□□□□ -0.49
PPFIA4-213ENST00000601609 WWC2-AS2Q96NR7 200 aa11.96□□□□□ -0.49
PPFIA4-213ENST00000601609 C15orf62A8K5M9 175 aa11.95□□□□□ -0.5
PPFIA4-213ENST00000601609 FCGR2BP31994 310 aaPredicted RBP11.95□□□□□ -0.5
PPFIA4-213ENST00000601609 ANKRD55Q3KP44 614 aa11.95□□□□□ -0.5
PPFIA4-213ENST00000601609 LAMTOR1Q6IAA8 161 aa11.95□□□□□ -0.5
PPFIA4-213ENST00000601609 DEFB125Q8N687 156 aa11.95□□□□□ -0.5
PPFIA4-213ENST00000601609 RCHY1Q96PM5 261 aa11.95□□□□□ -0.5
PPFIA4-213ENST00000601609 GINS3Q9BRX5 216 aa11.95□□□□□ -0.5
PPFIA4-213ENST00000601609 WDR12Q9GZL7 423 aaKnown RBP11.95□□□□□ -0.5
PPFIA4-213ENST00000601609 WFDC10AQ9H1F0 79 aa11.95□□□□□ -0.5
PPFIA4-213ENST00000601609 C19orf73Q9NVV2 129 aa11.95□□□□□ -0.5
PPFIA4-213ENST00000601609 IGHV3-49A0A0A0MS15 119 aa11.94□□□□□ -0.5
PPFIA4-213ENST00000601609 TRAV25A0A0B4J276 109 aa11.94□□□□□ -0.5
PPFIA4-213ENST00000601609 DUXBA0A1W2PPF3 345 aa11.94□□□□□ -0.5
PPFIA4-213ENST00000601609 OR11H12B2RN74 326 aa11.94□□□□□ -0.5
PPFIA4-213ENST00000601609 SFT2D2O95562 160 aa11.94□□□□□ -0.5
PPFIA4-213ENST00000601609 IFNA10P01566 189 aa11.94□□□□□ -0.5
PPFIA4-213ENST00000601609 C8orf88P0DMB2 117 aa11.94□□□□□ -0.5
PPFIA4-213ENST00000601609 NPY1RP25929 384 aa11.94□□□□□ -0.5
PPFIA4-213ENST00000601609 PPP1R1AQ13522 171 aa11.94□□□□□ -0.5
PPFIA4-213ENST00000601609 AARDQ4LEZ3 155 aa11.94□□□□□ -0.5
PPFIA4-213ENST00000601609 NMSQ5H8A3 153 aa11.94□□□□□ -0.5
PPFIA4-213ENST00000601609 SRD5A3Q9H8P0 318 aa11.94□□□□□ -0.5
PPFIA4-213ENST00000601609 A8MZ25 164 aa11.93□□□□□ -0.5
PPFIA4-213ENST00000601609 K7EMT4 169 aa11.93□□□□□ -0.5
PPFIA4-213ENST00000601609 TNFRSF9Q07011 255 aa11.93□□□□□ -0.5
PPFIA4-213ENST00000601609 C2orf83Q53S99 150 aa11.93□□□□□ -0.5
PPFIA4-213ENST00000601609 ZNF600Q6ZNG1 722 aa11.93□□□□□ -0.5
PPFIA4-213ENST00000601609 NOXA1Q86UR1 476 aa11.93□□□□□ -0.5
PPFIA4-213ENST00000601609 TMEM116Q8NCL8 245 aa11.93□□□□□ -0.5
PPFIA4-213ENST00000601609 DTD1Q8TEA8 209 aa11.93□□□□□ -0.5
PPFIA4-213ENST00000601609 RBKSQ9H477 322 aa11.93□□□□□ -0.5
PPFIA4-213ENST00000601609 FNDC4Q9H6D8 234 aaPredicted RBP11.93□□□□□ -0.5
PPFIA4-213ENST00000601609 IGHV3OR16-13A0A075B7E8 117 aa11.92□□□□□ -0.5
PPFIA4-213ENST00000601609 TRAV14DV4A0A0A6YYC5 116 aa11.92□□□□□ -0.5
PPFIA4-213ENST00000601609 IGHV3-74A0A0B4J1X5 117 aa11.92□□□□□ -0.5
PPFIA4-213ENST00000601609 IGHV7-4-1A0A0J9YVY3 117 aa11.92□□□□□ -0.5
PPFIA4-213ENST00000601609 A0A1B0GU03 582 aa11.92□□□□□ -0.5
PPFIA4-213ENST00000601609 CLN5O75503 358 aa11.92□□□□□ -0.5
PPFIA4-213ENST00000601609 HOXB5P09067 269 aa11.92□□□□□ -0.5
PPFIA4-213ENST00000601609 IL7P13232 177 aa11.92□□□□□ -0.5
PPFIA4-213ENST00000601609 BMI1P35226 326 aa11.92□□□□□ -0.5
PPFIA4-213ENST00000601609 MLANAQ16655 118 aa11.92□□□□□ -0.5
PPFIA4-213ENST00000601609 BSXQ3C1V8 233 aa11.92□□□□□ -0.5
PPFIA4-213ENST00000601609 SDHCQ99643 169 aaPredicted RBP11.92□□□□□ -0.5
PPFIA4-213ENST00000601609 SPAG8Q99932 426 aaPredicted RBP11.92□□□□□ -0.5
PPFIA4-213ENST00000601609 PAIP2BQ9ULR5 123 aaKnown RBP11.92□□□□□ -0.5
PPFIA4-213ENST00000601609 PUS1Q9Y606 427 aaKnown RBP eCLIP11.92□□□□□ -0.5
PPFIA4-213ENST00000601609 NDUFB6O95139 128 aa11.91□□□□□ -0.5
PPFIA4-213ENST00000601609 TMEM50AO95807 157 aa11.91□□□□□ -0.5
PPFIA4-213ENST00000601609 RND2P52198 227 aa11.91□□□□□ -0.5
PPFIA4-213ENST00000601609 PVRIGQ6DKI7 326 aa11.91□□□□□ -0.5
PPFIA4-213ENST00000601609 ETFRF1Q6IPR1 90 aa11.91□□□□□ -0.5
PPFIA4-213ENST00000601609 TOMM20LQ6UXN7 152 aa11.91□□□□□ -0.5
PPFIA4-213ENST00000601609 OR4X1Q8NH49 305 aa11.91□□□□□ -0.5
PPFIA4-213ENST00000601609 RNASEH2CQ8TDP1 164 aaKnown RBP11.91□□□□□ -0.5
PPFIA4-213ENST00000601609 SPATA25Q9BR10 227 aa11.91□□□□□ -0.5
PPFIA4-213ENST00000601609 C7orf50Q9BRJ6 194 aaKnown RBP11.91□□□□□ -0.5
PPFIA4-213ENST00000601609 RHPN1-AS1Q9BWJ2 59 aa11.91□□□□□ -0.5
PPFIA4-213ENST00000601609 MRPL36Q9P0J6 103 aaKnown RBP11.91□□□□□ -0.5
PPFIA4-213ENST00000601609 HSPB7Q9UBY9 170 aa11.91□□□□□ -0.5
PPFIA4-213ENST00000601609 SMPXQ9UHP9 88 aa11.91□□□□□ -0.5
PPFIA4-213ENST00000601609 IGKV3-7A0A075B6H7 116 aa11.9□□□□□ -0.5
PPFIA4-213ENST00000601609 TRAV30A0A087WSZ9 112 aa11.9□□□□□ -0.5
PPFIA4-213ENST00000601609 IFNA4P05014 189 aa11.9□□□□□ -0.5
PPFIA4-213ENST00000601609 IAPPP10997 89 aa11.9□□□□□ -0.5
PPFIA4-213ENST00000601609 SLC25A4P12235 298 aa11.9□□□□□ -0.5
PPFIA4-213ENST00000601609 TFPI2P48307 235 aa11.9□□□□□ -0.5
PPFIA4-213ENST00000601609 UBE2MP61081 183 aaKnown RBP11.9□□□□□ -0.5
PPFIA4-213ENST00000601609 HAGHQ16775 308 aa11.9□□□□□ -0.5
PPFIA4-213ENST00000601609 TIGITQ495A1 244 aa11.9□□□□□ -0.5
PPFIA4-213ENST00000601609 C4orf46Q504U0 113 aa11.9□□□□□ -0.5
PPFIA4-213ENST00000601609 COQ8AQ8NI60 647 aa11.9□□□□□ -0.5
PPFIA4-213ENST00000601609 ACY3Q96HD9 319 aa11.9□□□□□ -0.5
PPFIA4-213ENST00000601609 OR10C1Q96KK4 312 aa11.9□□□□□ -0.5
PPFIA4-213ENST00000601609 RNF2Q99496 336 aa11.9□□□□□ -0.5
PPFIA4-213ENST00000601609 UBQLN2Q9UHD9 624 aa11.9□□□□□ -0.5
PPFIA4-213ENST00000601609 FLVCR2Q9UPI3 526 aa11.9□□□□□ -0.5
PPFIA4-213ENST00000601609 TMED3Q9Y3Q3 217 aa11.9□□□□□ -0.5
PPFIA4-213ENST00000601609 U3KQ87 197 aa11.9□□□□□ -0.5
PPFIA4-213ENST00000601609 IGHV3-66A0A0C4DH42 116 aa11.89□□□□□ -0.51
PPFIA4-213ENST00000601609 OR4C46A6NHA9 309 aa11.89□□□□□ -0.51
PPFIA4-213ENST00000601609 CHEK1O14757 476 aa11.89□□□□□ -0.51
PPFIA4-213ENST00000601609 TSPAN4O14817 238 aa11.89□□□□□ -0.51
PPFIA4-213ENST00000601609 LRTM2Q8N967 370 aa11.89□□□□□ -0.51
PPFIA4-213ENST00000601609 NARS2Q96I59 477 aaKnown RBP11.89□□□□□ -0.51
PPFIA4-213ENST00000601609 TM2D3Q9BRN9 247 aa11.89□□□□□ -0.51
PPFIA4-213ENST00000601609 COL7A1Q02388 2944 aa11.88□□□□□ -0.51
PPFIA4-213ENST00000601609 C9orf170A2RU37 121 aa11.88□□□□□ -0.51
PPFIA4-213ENST00000601609 MED6O75586 246 aa11.88□□□□□ -0.51
PPFIA4-213ENST00000601609 OR4E1P0C645 316 aa11.88□□□□□ -0.51
PPFIA4-213ENST00000601609 ANXA7P20073 488 aaKnown RBP11.88□□□□□ -0.51
PPFIA4-213ENST00000601609 OR10J1P30954 320 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms